Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472319
Identifier: 13472319
GI number: 13472319
Start: 2082618
End: 2083325
Strand: Direct
Name: 13472319
Synonym: mlr2577
Alternate gene names: NA
Gene position: 2082618-2083325 (Clockwise)
Preceding gene: 13472317
Following gene: 13472321
Centisome position: 29.6
GC content: 65.25
Gene sequence:
>708_bases ATGAGCCAGCGAAGTATTCGGCGACGCATTGCGACCTGGGTATTGGCCTTGCTTGGCGCCTGGATCGTGCTTGCCTATCT CGCCGCGCCGGAATTCTGGACATTCCGCGAGCGCGGCTTTCGCGACCAGCGCCTCGAAATGGTGACGCACACGCCGCAAG GCATTCCCGGTGACCCGATCAATGTCGGCCTTGTCGGCACGGAGAAAGAGGTGGTCCATGCCTTCGCCGTTGCCGGTTGG GACACCGCTGACGCCGTCACCTTGAGAACCGCTATCGACATCGGCGAAAGTGTGTTGTTTTCCCGCCCCTATCCCGATGC GCCGATGAGCCGCCTGCTGTTCGAGGGCCGCGCCCAGGATCTCGCTTTCGAAAAGCCGGTGGGCGACAGCGCCGACCGGC GCCATCACGTCCGTTTCTGGAAGACCGATACGGTCGGCGACGACGGCCGCCCGCTATGGCTGGGTGCCGCCAGCTTCGAT CGCGGCGTCGGCCTCAGCCACGACACCGGCGCCATCACCCATCACATCGGTCCCGACATCGACGCCGAACGCGACTTCCT GATCGGCGACCTCAACGCGGCCGGCCTGCTGGCATCGACCAGCGAATTGCCGGGCATCGGCGCCACCAGGACCGGCCGCA ATGGCGGCGGCGATCCCTATTTCACCGACGGCAAGGCAATCATCGGCGTGCTGAAGCAGCCGCAGTGA
Upstream 100 bases:
>100_bases AACGGCTATCGCGCCTGTCGCTAGCATCGGCGCGCCCGGACCCTCTGCCGGCGGCACGCGACTCCGCATAAAGTGACGCG GAACGGGCGGGCGACGGCAC
Downstream 100 bases:
>100_bases CCGGACGGCGAGGTCAGGTCGTGCTGATCACGATCTTGCCGAACGGCCCCTTCTCGAGATGCTGGAGGGCCTGCGGCACC TCGTCGAAGCCAAAGACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSQRSIRRRIATWVLALLGAWIVLAYLAAPEFWTFRERGFRDQRLEMVTHTPQGIPGDPINVGLVGTEKEVVHAFAVAGW DTADAVTLRTAIDIGESVLFSRPYPDAPMSRLLFEGRAQDLAFEKPVGDSADRRHHVRFWKTDTVGDDGRPLWLGAASFD RGVGLSHDTGAITHHIGPDIDAERDFLIGDLNAAGLLASTSELPGIGATRTGRNGGGDPYFTDGKAIIGVLKQPQ
Sequences:
>Translated_235_residues MSQRSIRRRIATWVLALLGAWIVLAYLAAPEFWTFRERGFRDQRLEMVTHTPQGIPGDPINVGLVGTEKEVVHAFAVAGW DTADAVTLRTAIDIGESVLFSRPYPDAPMSRLLFEGRAQDLAFEKPVGDSADRRHHVRFWKTDTVGDDGRPLWLGAASFD RGVGLSHDTGAITHHIGPDIDAERDFLIGDLNAAGLLASTSELPGIGATRTGRNGGGDPYFTDGKAIIGVLKQPQ >Mature_234_residues SQRSIRRRIATWVLALLGAWIVLAYLAAPEFWTFRERGFRDQRLEMVTHTPQGIPGDPINVGLVGTEKEVVHAFAVAGWD TADAVTLRTAIDIGESVLFSRPYPDAPMSRLLFEGRAQDLAFEKPVGDSADRRHHVRFWKTDTVGDDGRPLWLGAASFDR GVGLSHDTGAITHHIGPDIDAERDFLIGDLNAAGLLASTSELPGIGATRTGRNGGGDPYFTDGKAIIGVLKQPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25582; Mature: 25451
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRSIRRRIATWVLALLGAWIVLAYLAAPEFWTFRERGFRDQRLEMVTHTPQGIPGDPI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCE NVGLVGTEKEVVHAFAVAGWDTADAVTLRTAIDIGESVLFSRPYPDAPMSRLLFEGRAQD EEEEECCHHHHHHHHHHCCCCCCCCEEHHHHHHCCCHHHCCCCCCCCHHHHHHHHCCHHC LAFEKPVGDSADRRHHVRFWKTDTVGDDGRPLWLGAASFDRGVGLSHDTGAITHHIGPDI CEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCC DAERDFLIGDLNAAGLLASTSELPGIGATRTGRNGGGDPYFTDGKAIIGVLKQPQ CCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCHHEEEECCCCC >Mature Secondary Structure SQRSIRRRIATWVLALLGAWIVLAYLAAPEFWTFRERGFRDQRLEMVTHTPQGIPGDPI CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCE NVGLVGTEKEVVHAFAVAGWDTADAVTLRTAIDIGESVLFSRPYPDAPMSRLLFEGRAQD EEEEECCHHHHHHHHHHCCCCCCCCEEHHHHHHCCCHHHCCCCCCCCHHHHHHHHCCHHC LAFEKPVGDSADRRHHVRFWKTDTVGDDGRPLWLGAASFDRGVGLSHDTGAITHHIGPDI CEECCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCC DAERDFLIGDLNAAGLLASTSELPGIGATRTGRNGGGDPYFTDGKAIIGVLKQPQ CCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA