Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472317
Identifier: 13472317
GI number: 13472317
Start: 2080483
End: 2081538
Strand: Direct
Name: 13472317
Synonym: mlr2573
Alternate gene names: NA
Gene position: 2080483-2081538 (Clockwise)
Preceding gene: 13472313
Following gene: 13472319
Centisome position: 29.57
GC content: 65.15
Gene sequence:
>1056_bases ATGGATCAGTCGTTGACGCAGCGTCTGGACCAGCCATTGAGGCAGAAAGGCAAGCACCGCGGCAGATCACGCGGCAAGCA GCAGATCGCACCAAGGCAGACGCCACAGGAGACGCAGGAGCAGCAAACCTCGCCCGCCGATATTCCGGTGCCCGAGCCGC GTCCCACGGACGCGCCAAAGGCCGACGCCGCACCGGTGGAAGAGCAAAAGAGCGTCGGTCCAAAGGCCTCGGACGCCTCC AACCAGCTCAATGAGGAAAAGGCTCGTCAGGCAAAGCAAGCCCATCCCGAGCCATCGGCCCGCGAATCTTCAACCCGAGA GCCGTCAACCGAAACGGAAAGCGAGCCTGAGTCGCCAGCCGAGGTGCCGATCCCGACACGAAGGCCCGACACTGCGGAAC CAGAGGTTCAGCCACCAGCGGTTGCGCCACAGCCGCCTGAAAAACCGGCGGAAGGTGGCGACGAGAAAATGCTTCCCGAT CCGCGCTCGGCAGACCGGCCAGGCGAAAAAATGCCCGCCGGGGAAGTCGCCTGCCGTGACAGGCTGAAGTCGCTCGGCGT CGAATTCGAGGAGCACGGTGCGGAAAGCAATCCCGAAATCGGCTGCTCCATCCCCTACCCCCTCGTGCTGAAGAGCCTTG GCAAGTCGATCGCCATCGCCCCCGGCACCGAGCTCAACTGTCCAATGGCCGAGGCGGCGGCGCGGTTTGCCGCCGACGTC GTCCAGCCGGAGGCGAAAGCCGAATTCGGCGCCGACCTCAAATCGATCAGCCAGGCATCGGCCTTCGTCTGCCGCCCGCG CCACGGCACCAGGAAACTGTCGGAGCACGCTTTCGGCAACGCGCTCGACATAGCCAGTTTCACCTTGTCCGATGGCAGGA AGGTCGAGGTCGGTCCAACGCCGCCCGAAGGGGACGCCAAATTCCTCAACGCCGTGCGCAAGGCCGCCTGCGGTCCGTTC AAGACCGTGCTCGGACCGGGTGCCGACGCCGACCACGCCTTGCACTTCCACCTCGATCTCGAGCCACGCCGGCATGGCGG CACGTTCTGCCAGTAG
Upstream 100 bases:
>100_bases ACTTTGCACCTTGGCGCTGCCTTTGGCGGCCGCGGTTCTGCTGGCGACGCCGGCCGACGCCAGACATCGTCACAGGCATC ACCAGCCGCTGTCCCCTCGG
Downstream 100 bases:
>100_bases CTATTGTCCCTTGAGGATCGCCGCAATTCCGCCGCAGGCGTGAACGCGGGCGCTGAGTTTTCCTTTACCCTTGATCGTTA AAATGCCGGATATCCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Extensin Domain Protein; Conserved Protein; Extensin Domain-Containing Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MDQSLTQRLDQPLRQKGKHRGRSRGKQQIAPRQTPQETQEQQTSPADIPVPEPRPTDAPKADAAPVEEQKSVGPKASDAS NQLNEEKARQAKQAHPEPSARESSTREPSTETESEPESPAEVPIPTRRPDTAEPEVQPPAVAPQPPEKPAEGGDEKMLPD PRSADRPGEKMPAGEVACRDRLKSLGVEFEEHGAESNPEIGCSIPYPLVLKSLGKSIAIAPGTELNCPMAEAAARFAADV VQPEAKAEFGADLKSISQASAFVCRPRHGTRKLSEHAFGNALDIASFTLSDGRKVEVGPTPPEGDAKFLNAVRKAACGPF KTVLGPGADADHALHFHLDLEPRRHGGTFCQ
Sequences:
>Translated_351_residues MDQSLTQRLDQPLRQKGKHRGRSRGKQQIAPRQTPQETQEQQTSPADIPVPEPRPTDAPKADAAPVEEQKSVGPKASDAS NQLNEEKARQAKQAHPEPSARESSTREPSTETESEPESPAEVPIPTRRPDTAEPEVQPPAVAPQPPEKPAEGGDEKMLPD PRSADRPGEKMPAGEVACRDRLKSLGVEFEEHGAESNPEIGCSIPYPLVLKSLGKSIAIAPGTELNCPMAEAAARFAADV VQPEAKAEFGADLKSISQASAFVCRPRHGTRKLSEHAFGNALDIASFTLSDGRKVEVGPTPPEGDAKFLNAVRKAACGPF KTVLGPGADADHALHFHLDLEPRRHGGTFCQ >Mature_351_residues MDQSLTQRLDQPLRQKGKHRGRSRGKQQIAPRQTPQETQEQQTSPADIPVPEPRPTDAPKADAAPVEEQKSVGPKASDAS NQLNEEKARQAKQAHPEPSARESSTREPSTETESEPESPAEVPIPTRRPDTAEPEVQPPAVAPQPPEKPAEGGDEKMLPD PRSADRPGEKMPAGEVACRDRLKSLGVEFEEHGAESNPEIGCSIPYPLVLKSLGKSIAIAPGTELNCPMAEAAARFAADV VQPEAKAEFGADLKSISQASAFVCRPRHGTRKLSEHAFGNALDIASFTLSDGRKVEVGPTPPEGDAKFLNAVRKAACGPF KTVLGPGADADHALHFHLDLEPRRHGGTFCQ
Specific function: Unknown
COG id: COG3921
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37672; Mature: 37672
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQSLTQRLDQPLRQKGKHRGRSRGKQQIAPRQTPQETQEQQTSPADIPVPEPRPTDAPK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC ADAAPVEEQKSVGPKASDASNQLNEEKARQAKQAHPEPSARESSTREPSTETESEPESPA CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC EVPIPTRRPDTAEPEVQPPAVAPQPPEKPAEGGDEKMLPDPRSADRPGEKMPAGEVACRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RLKSLGVEFEEHGAESNPEIGCSIPYPLVLKSLGKSIAIAPGTELNCPMAEAAARFAADV HHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH VQPEAKAEFGADLKSISQASAFVCRPRHGTRKLSEHAFGNALDIASFTLSDGRKVEVGPT HCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCHHHHHEEEECCCCEEECCCC PPEGDAKFLNAVRKAACGPFKTVLGPGADADHALHFHLDLEPRRHGGTFCQ CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MDQSLTQRLDQPLRQKGKHRGRSRGKQQIAPRQTPQETQEQQTSPADIPVPEPRPTDAPK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC ADAAPVEEQKSVGPKASDASNQLNEEKARQAKQAHPEPSARESSTREPSTETESEPESPA CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC EVPIPTRRPDTAEPEVQPPAVAPQPPEKPAEGGDEKMLPDPRSADRPGEKMPAGEVACRD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RLKSLGVEFEEHGAESNPEIGCSIPYPLVLKSLGKSIAIAPGTELNCPMAEAAARFAADV HHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHH VQPEAKAEFGADLKSISQASAFVCRPRHGTRKLSEHAFGNALDIASFTLSDGRKVEVGPT HCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCHHHHHEEEECCCCEEECCCC PPEGDAKFLNAVRKAACGPFKTVLGPGADADHALHFHLDLEPRRHGGTFCQ CCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA