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The map label for this gene is 13472298

Identifier: 13472298

GI number: 13472298

Start: 2061606

End: 2062211

Strand: Direct

Name: 13472298

Synonym: mlr2543

Alternate gene names: NA

Gene position: 2061606-2062211 (Clockwise)

Preceding gene: 13472296

Following gene: 13472300

Centisome position: 29.3

GC content: 65.35

Gene sequence:

>606_bases
ATGCCTGTGATTGCCAGGAAGGCACTGAAACCCCGCACCAAGCCGGCGGAGGTGCGCCGTGACGATATCTTGCGGGCCGC
CACGTCGCTGTTCGTTGCCAAGGGCGTCGGCACCACGACGATAGACGAGATCGCCACGCGGGCCGAAGTCGCCAAAGGCA
CCTTCTATCTCTACTTCACCTCCAAGGAGGATGTCGTTGCCGCCCTGCGCGAGCGGTTCGTGGCGGGATTTCGCGCCCGC
ATCCTGAGTGCCATCGAGGCCTGCCCGCCCGATGACTGGACCGGACGCCTGAAGAGTTTCGTCGGCGCCGGCATCGCGGC
CTATCTCGACGATCATCAGCTGCACGACGTCGTCTTCCACGACCATCGCCCCGACCAGCGGCGGATGAAAGGCGACAATC
CGTTGCTCGGCGATCTCTCCGCCCTGCTGGCGGCCGGCACCAAAGCCGGCGCCTGGTCGGTCGATGATCCGGACCTTGCC
GCGATCGTCCTGTTCAACGGGCTGCACGGCGCGGTCGATCATGCCATCGAGTGCGGCGTGCGCGACGGCAGCGAACTCGC
GGCAAACCTTTCCGCGCTGTTCCTGAGGATGGTGCGACCCAAATAG

Upstream 100 bases:

>100_bases
TTGGAATCATTATAAAAAGCTTGTCTCGACCGTTAGAAGCAGGTTAATGAAAATCGATAAGCCAGTGCTGCGGAAAGACC
CGAACGGCGAGCGGAACCCA

Downstream 100 bases:

>100_bases
GCCTGTCGTCCGCGGCTGGTCAGGTCTTAGCTGCCATATTGCTCGCCGGAAACCGCTTCCAGCCAGTCGGCATGGACGCC
GTCGAGCGCTTCCTGCATGG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPVIARKALKPRTKPAEVRRDDILRAATSLFVAKGVGTTTIDEIATRAEVAKGTFYLYFTSKEDVVAALRERFVAGFRAR
ILSAIEACPPDDWTGRLKSFVGAGIAAYLDDHQLHDVVFHDHRPDQRRMKGDNPLLGDLSALLAAGTKAGAWSVDDPDLA
AIVLFNGLHGAVDHAIECGVRDGSELAANLSALFLRMVRPK

Sequences:

>Translated_201_residues
MPVIARKALKPRTKPAEVRRDDILRAATSLFVAKGVGTTTIDEIATRAEVAKGTFYLYFTSKEDVVAALRERFVAGFRAR
ILSAIEACPPDDWTGRLKSFVGAGIAAYLDDHQLHDVVFHDHRPDQRRMKGDNPLLGDLSALLAAGTKAGAWSVDDPDLA
AIVLFNGLHGAVDHAIECGVRDGSELAANLSALFLRMVRPK
>Mature_200_residues
PVIARKALKPRTKPAEVRRDDILRAATSLFVAKGVGTTTIDEIATRAEVAKGTFYLYFTSKEDVVAALRERFVAGFRARI
LSAIEACPPDDWTGRLKSFVGAGIAAYLDDHQLHDVVFHDHRPDQRRMKGDNPLLGDLSALLAAGTKAGAWSVDDPDLAA
IVLFNGLHGAVDHAIECGVRDGSELAANLSALFLRMVRPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21818; Mature: 21687

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVIARKALKPRTKPAEVRRDDILRAATSLFVAKGVGTTTIDEIATRAEVAKGTFYLYFT
CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEE
SKEDVVAALRERFVAGFRARILSAIEACPPDDWTGRLKSFVGAGIAAYLDDHQLHDVVFH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHC
DHRPDQRRMKGDNPLLGDLSALLAAGTKAGAWSVDDPDLAAIVLFNGLHGAVDHAIECGV
CCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHCCC
RDGSELAANLSALFLRMVRPK
CCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVIARKALKPRTKPAEVRRDDILRAATSLFVAKGVGTTTIDEIATRAEVAKGTFYLYFT
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEEE
SKEDVVAALRERFVAGFRARILSAIEACPPDDWTGRLKSFVGAGIAAYLDDHQLHDVVFH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHC
DHRPDQRRMKGDNPLLGDLSALLAAGTKAGAWSVDDPDLAAIVLFNGLHGAVDHAIECGV
CCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHCCC
RDGSELAANLSALFLRMVRPK
CCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA