Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472262

Identifier: 13472262

GI number: 13472262

Start: 2028980

End: 2029279

Strand: Direct

Name: 13472262

Synonym: msr2497

Alternate gene names: NA

Gene position: 2028980-2029279 (Clockwise)

Preceding gene: 13472260

Following gene: 13472264

Centisome position: 28.84

GC content: 60.33

Gene sequence:

>300_bases
ATGCATCTGTCGAACGAGAGCATCATTGTCATATTGGTTGTCGGCCTTGTTGCCGGATGGTTGGCCGGGAAGATCGTGCG
GGGGGCTGGCTTTGGCCTAATCGGGGACATAGCAATCGGGATCATCGGCGCGTTCATCGGTGACTGGCTACTGCCTCGCC
TAGGCATCCATCTTGGGAGCGGAACGATCAGCTTGATCGTCAACGCCACCGTCGGTGCGATCGTACTTCTCCTCATCATC
CGGTTGGTTGCCGGTGGCGGTCGCTTCGGCGGCGGATGGGGTGGTCGTCGGTGGCGCTAG

Upstream 100 bases:

>100_bases
ACCCAGGCGATAGCGGGGATGGAGGATCGGCTATGGAGTTAGCGCGCTAATTTACGGGCACCAATCACACAGCAAAGAAA
GGGAGCCCGGGAGGATCACC

Downstream 100 bases:

>100_bases
CCCGCGGTTGCGAACCCATCGTCCCCAACGACGGGCGCAATCGCGTTTTCGCACAACCTCGTTCGAACGGTCATTAGAAC
GATTGGGTCTGACCCTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MHLSNESIIVILVVGLVAGWLAGKIVRGAGFGLIGDIAIGIIGAFIGDWLLPRLGIHLGSGTISLIVNATVGAIVLLLII
RLVAGGGRFGGGWGGRRWR

Sequences:

>Translated_99_residues
MHLSNESIIVILVVGLVAGWLAGKIVRGAGFGLIGDIAIGIIGAFIGDWLLPRLGIHLGSGTISLIVNATVGAIVLLLII
RLVAGGGRFGGGWGGRRWR
>Mature_99_residues
MHLSNESIIVILVVGLVAGWLAGKIVRGAGFGLIGDIAIGIIGAFIGDWLLPRLGIHLGSGTISLIVNATVGAIVLLLII
RLVAGGGRFGGGWGGRRWR

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10177; Mature: 10177

Theoretical pI: Translated: 12.38; Mature: 12.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSNESIIVILVVGLVAGWLAGKIVRGAGFGLIGDIAIGIIGAFIGDWLLPRLGIHLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTISLIVNATVGAIVLLLIIRLVAGGGRFGGGWGGRRWR
CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHLSNESIIVILVVGLVAGWLAGKIVRGAGFGLIGDIAIGIIGAFIGDWLLPRLGIHLGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GTISLIVNATVGAIVLLLIIRLVAGGGRFGGGWGGRRWR
CEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA