Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13472260
Identifier: 13472260
GI number: 13472260
Start: 2025133
End: 2027394
Strand: Direct
Name: 13472260
Synonym: mlr2494
Alternate gene names: NA
Gene position: 2025133-2027394 (Clockwise)
Preceding gene: 13472256
Following gene: 13472262
Centisome position: 28.78
GC content: 64.24
Gene sequence:
>2262_bases ATGGCAACTCCCCGTGATAAACTTCCTCGTTGCTCCGGCAAGGCCGGCTCAACCCAACAAACAATTATCCCAATGGTTGC GCCAAGTCACAGTGTTTTTCGATGGCCAGGGCGATGCCGGCATGACCTCTCGCCGCTCTGGCCGGAACCTTGGAAGGCTT GTAGCATCGCCCGTGACGGAGGAAGCGAGGGGCGGTTGCGAACGATCGGTCAAATATTGTTGGTGTTGGCATTGAGCTGC CTGGGCTTGCGGGGTGCCAACGCTGTAACGCTCGACTCCAGCGTCGCCGTCACCGATCCCGCCACATTGCAGGCGCTGGA GCGCGGCGGCCTGTCGATCAGCCGCCTGCTCGGACCCGCGCTCGGCCTCACCCGCGATGTCGACAATCGCGGCCTGTTTT CCGTGCCGGCGCTGGCCACGGTGCGCGACACGGTCAAGCAGGAGATATCGGACGAGCCGAAGACCAGCCCCGACCCCTAT GTCGCCGCCATGGCCAAATCGAACGACGCCAGCCAGAAATTCAATCCGAAATACATCGACGATGACGGCTCGACGCTGGA CCTGACCGGCGTCGTCAACCGCATGGATCGCGGCTATCTCGGCCACACCGAATGCGGCGAGATCAGGCTGATCTACCGCT TCCACTATTCGGTCACCGAAAAGCCGGCCAAGGGCAAGGTGGCGCAGCGCATCTCCTCGCGCCTGCCGCTGACCATGAGC CTGGTCTTCAATGCCAAGCCGACGCGGGTGCAGGCGCGTGCCTCGAAGGATCTGCCTGCTGCCACTGACGTGTCCTGCGC CGACGTCGCCCAACGCTGGCTCGCCGCCGGCCAGAAAGAACTGCCGCCCGAGCAATTGGCCGCCTGGCTGCGCTCCGACG AAGGCCCGCTGTCCGGCGCAATGCTCAATTCCTCGCAGATCATGCGGCTTGAGCTCAACATGCAGGTGCTGCGCCTGTCG GCCTCGACGCGGCGCGACTTCGGCGGCCATGCCGAATATCTCCTGAAGATCTTCAAATGGGATCCGGCGACCGCGAGCTT CCATGAATCGAAAATGGAGAACCAGATCGACCGGGCGACGGTGCTGGCCGACAAGCCGTCCTTCGCCAAATGGCTGCTCA CCGACCGCAACATCTACGATCTCGACCATGGCCGGCTGGTCATCGACGAAAAGTTCCTCGCCAAAAGTGCCGTTTCCGTC GCGCCCGGCGGCCTGAGCCGCTCGCAGAACAACATCGCCTATGGGCTGGTCGACGATGCCGATATCGACAAGGCGCTGAA GGATTACGTCGCCAGGGGCAACACGCTCGCCACCATCAGGTCGGTTGCCGGTTTCAATTTGCGGCTGAACGAAATGAGCT GCACCGGCTGCCATCAGACCCGTGGCATTGCCGGCTTCCACTACACCGGCGCCGACCCGGCCAGCGAACCGCGCCGCAAC GCCGTCTTCGTGCCGGGCTCGGCGGTGTTCTTCGCCGACCTGCCGCGCCGCCGCGCCATCGTCGAGCAGTTCGCCGCCGG CGGCCATCCGGATTTCACCAGAGGGTTCGCCGCCCGCCCGGACCAGAAATACGCCGAAGCGCTGAACGGCACCGATCTCT ACAATGGCTGGGGCTCGATCTGTTATCGCGGTGACGACGCAAGCTTCAAGGACTGGACATGCGGCTCGGGCCTGCGCTGC GCCGGCGTCCACGAAAGCGCCATCCATCCGGGATTCGGCACCTGCGTCAGCGACAAGGGCACCGCGGTCGGCGACCCCGT CGAGTTCGGCGAGATCAAAATGTCGACATGGGGCAACGACCAGTATTGCCGCCTGTCGCCGGCCACCGCAAAGGCCTGCG CCATTGACCCCGCGCGCGACAAGAAGCCGGTGGTGAAACTCGCCGGCTATGGCGCGGCACGCCAGCGCTACGACAATCCC GAGCAGAAGACCGGCGGCTTTCCCGGCGGCATGCTGCGCAAGGCAAGCTGCGACAAGCTTCCCGACGAGGCGACATGCGG CCGTCTCGCCAAGACCGGCTTCAACGACTGCATCGCGTCGGGCAAGGACCACAAATTCTGCACCAGGGAGTTCACCAAGA CCGCGGGCCTGCGCGCCTGCGACAAGGCGCATCCCTGCCGCGAGGACTATATCTGCACCGCCGGCTATGACGATTTACCC CAGGCCAAGCCTGGCGAAGGCACCTGCATCCCGCCCTATTTCATCTTCCAGTTCCGCGTCGACGGCCACCCTAGAAGCTG GGTGCAGGATGTCCGCGAGTGA
Upstream 100 bases:
>100_bases GATAGGAATTTGGAACCCGCCGCCGCCGCCGATCCCACCGCCGCCGCTGTCGCTGCGGTCGTCCTCGATATTGTCACTCT GACGACGGCCTCTCCAGAGC
Downstream 100 bases:
>100_bases GGGAACGGTTTGCCGCAGGCAAATTGAAAGGTCCACTGGACCTTTCAAAGGGCTAGAGCATCCGGAGCCGTAGCGGAGGG CAACCGGCCGCTGAACAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MATPRDKLPRCSGKAGSTQQTIIPMVAPSHSVFRWPGRCRHDLSPLWPEPWKACSIARDGGSEGRLRTIGQILLVLALSC LGLRGANAVTLDSSVAVTDPATLQALERGGLSISRLLGPALGLTRDVDNRGLFSVPALATVRDTVKQEISDEPKTSPDPY VAAMAKSNDASQKFNPKYIDDDGSTLDLTGVVNRMDRGYLGHTECGEIRLIYRFHYSVTEKPAKGKVAQRISSRLPLTMS LVFNAKPTRVQARASKDLPAATDVSCADVAQRWLAAGQKELPPEQLAAWLRSDEGPLSGAMLNSSQIMRLELNMQVLRLS ASTRRDFGGHAEYLLKIFKWDPATASFHESKMENQIDRATVLADKPSFAKWLLTDRNIYDLDHGRLVIDEKFLAKSAVSV APGGLSRSQNNIAYGLVDDADIDKALKDYVARGNTLATIRSVAGFNLRLNEMSCTGCHQTRGIAGFHYTGADPASEPRRN AVFVPGSAVFFADLPRRRAIVEQFAAGGHPDFTRGFAARPDQKYAEALNGTDLYNGWGSICYRGDDASFKDWTCGSGLRC AGVHESAIHPGFGTCVSDKGTAVGDPVEFGEIKMSTWGNDQYCRLSPATAKACAIDPARDKKPVVKLAGYGAARQRYDNP EQKTGGFPGGMLRKASCDKLPDEATCGRLAKTGFNDCIASGKDHKFCTREFTKTAGLRACDKAHPCREDYICTAGYDDLP QAKPGEGTCIPPYFIFQFRVDGHPRSWVQDVRE
Sequences:
>Translated_753_residues MATPRDKLPRCSGKAGSTQQTIIPMVAPSHSVFRWPGRCRHDLSPLWPEPWKACSIARDGGSEGRLRTIGQILLVLALSC LGLRGANAVTLDSSVAVTDPATLQALERGGLSISRLLGPALGLTRDVDNRGLFSVPALATVRDTVKQEISDEPKTSPDPY VAAMAKSNDASQKFNPKYIDDDGSTLDLTGVVNRMDRGYLGHTECGEIRLIYRFHYSVTEKPAKGKVAQRISSRLPLTMS LVFNAKPTRVQARASKDLPAATDVSCADVAQRWLAAGQKELPPEQLAAWLRSDEGPLSGAMLNSSQIMRLELNMQVLRLS ASTRRDFGGHAEYLLKIFKWDPATASFHESKMENQIDRATVLADKPSFAKWLLTDRNIYDLDHGRLVIDEKFLAKSAVSV APGGLSRSQNNIAYGLVDDADIDKALKDYVARGNTLATIRSVAGFNLRLNEMSCTGCHQTRGIAGFHYTGADPASEPRRN AVFVPGSAVFFADLPRRRAIVEQFAAGGHPDFTRGFAARPDQKYAEALNGTDLYNGWGSICYRGDDASFKDWTCGSGLRC AGVHESAIHPGFGTCVSDKGTAVGDPVEFGEIKMSTWGNDQYCRLSPATAKACAIDPARDKKPVVKLAGYGAARQRYDNP EQKTGGFPGGMLRKASCDKLPDEATCGRLAKTGFNDCIASGKDHKFCTREFTKTAGLRACDKAHPCREDYICTAGYDDLP QAKPGEGTCIPPYFIFQFRVDGHPRSWVQDVRE >Mature_752_residues ATPRDKLPRCSGKAGSTQQTIIPMVAPSHSVFRWPGRCRHDLSPLWPEPWKACSIARDGGSEGRLRTIGQILLVLALSCL GLRGANAVTLDSSVAVTDPATLQALERGGLSISRLLGPALGLTRDVDNRGLFSVPALATVRDTVKQEISDEPKTSPDPYV AAMAKSNDASQKFNPKYIDDDGSTLDLTGVVNRMDRGYLGHTECGEIRLIYRFHYSVTEKPAKGKVAQRISSRLPLTMSL VFNAKPTRVQARASKDLPAATDVSCADVAQRWLAAGQKELPPEQLAAWLRSDEGPLSGAMLNSSQIMRLELNMQVLRLSA STRRDFGGHAEYLLKIFKWDPATASFHESKMENQIDRATVLADKPSFAKWLLTDRNIYDLDHGRLVIDEKFLAKSAVSVA PGGLSRSQNNIAYGLVDDADIDKALKDYVARGNTLATIRSVAGFNLRLNEMSCTGCHQTRGIAGFHYTGADPASEPRRNA VFVPGSAVFFADLPRRRAIVEQFAAGGHPDFTRGFAARPDQKYAEALNGTDLYNGWGSICYRGDDASFKDWTCGSGLRCA GVHESAIHPGFGTCVSDKGTAVGDPVEFGEIKMSTWGNDQYCRLSPATAKACAIDPARDKKPVVKLAGYGAARQRYDNPE QKTGGFPGGMLRKASCDKLPDEATCGRLAKTGFNDCIASGKDHKFCTREFTKTAGLRACDKAHPCREDYICTAGYDDLPQ AKPGEGTCIPPYFIFQFRVDGHPRSWVQDVRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82022; Mature: 81890
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPRDKLPRCSGKAGSTQQTIIPMVAPSHSVFRWPGRCRHDLSPLWPEPWKACSIARDG CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHEEECCC GSEGRLRTIGQILLVLALSCLGLRGANAVTLDSSVAVTDPATLQALERGGLSISRLLGPA CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHCCCCHHHHHHHH LGLTRDVDNRGLFSVPALATVRDTVKQEISDEPKTSPDPYVAAMAKSNDASQKFNPKYID HCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEC DDGSTLDLTGVVNRMDRGYLGHTECGEIRLIYRFHYSVTEKPAKGKVAQRISSRLPLTMS CCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEE LVFNAKPTRVQARASKDLPAATDVSCADVAQRWLAAGQKELPPEQLAAWLRSDEGPLSGA EEECCCCCEEEHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCE MLNSSQIMRLELNMQVLRLSASTRRDFGGHAEYLLKIFKWDPATASFHESKMENQIDRAT EECCCEEEEEEECEEEEEECHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHE VLADKPSFAKWLLTDRNIYDLDHGRLVIDEKFLAKSAVSVAPGGLSRSQNNIAYGLVDDA EEECCCCHHHHEECCCCEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCH DIDKALKDYVARGNTLATIRSVAGFNLRLNEMSCTGCHQTRGIAGFHYTGADPASEPRRN HHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCHHHCCCCEEEECCCCCCCCCCCC AVFVPGSAVFFADLPRRRAIVEQFAAGGHPDFTRGFAARPDQKYAEALNGTDLYNGWGSI EEECCCCEEEEECCCHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHCCCCCHHCCCCCE CYRGDDASFKDWTCGSGLRCAGVHESAIHPGFGTCVSDKGTAVGDPVEFGEIKMSTWGND EEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCC QYCRLSPATAKACAIDPARDKKPVVKLAGYGAARQRYDNPEQKTGGFPGGMLRKASCDKL CEEEECCCCCHHEECCCCCCCCCEEEEECCCHHHHHCCCCHHHCCCCCCCCCCCCHHCCC PDEATCGRLAKTGFNDCIASGKDHKFCTREFTKTAGLRACDKAHPCREDYICTAGYDDLP CCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCCCC QAKPGEGTCIPPYFIFQFRVDGHPRSWVQDVRE CCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCC >Mature Secondary Structure ATPRDKLPRCSGKAGSTQQTIIPMVAPSHSVFRWPGRCRHDLSPLWPEPWKACSIARDG CCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHEEECCC GSEGRLRTIGQILLVLALSCLGLRGANAVTLDSSVAVTDPATLQALERGGLSISRLLGPA CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEECCCHHHHHHHHCCCCHHHHHHHH LGLTRDVDNRGLFSVPALATVRDTVKQEISDEPKTSPDPYVAAMAKSNDASQKFNPKYID HCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEC DDGSTLDLTGVVNRMDRGYLGHTECGEIRLIYRFHYSVTEKPAKGKVAQRISSRLPLTMS CCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCEEEE LVFNAKPTRVQARASKDLPAATDVSCADVAQRWLAAGQKELPPEQLAAWLRSDEGPLSGA EEECCCCCEEEHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCE MLNSSQIMRLELNMQVLRLSASTRRDFGGHAEYLLKIFKWDPATASFHESKMENQIDRAT EECCCEEEEEEECEEEEEECHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHE VLADKPSFAKWLLTDRNIYDLDHGRLVIDEKFLAKSAVSVAPGGLSRSQNNIAYGLVDDA EEECCCCHHHHEECCCCEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCH DIDKALKDYVARGNTLATIRSVAGFNLRLNEMSCTGCHQTRGIAGFHYTGADPASEPRRN HHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCHHHCCCCEEEECCCCCCCCCCCC AVFVPGSAVFFADLPRRRAIVEQFAAGGHPDFTRGFAARPDQKYAEALNGTDLYNGWGSI EEECCCCEEEEECCCHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHCCCCCHHCCCCCE CYRGDDASFKDWTCGSGLRCAGVHESAIHPGFGTCVSDKGTAVGDPVEFGEIKMSTWGND EEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCC QYCRLSPATAKACAIDPARDKKPVVKLAGYGAARQRYDNPEQKTGGFPGGMLRKASCDKL CEEEECCCCCHHEECCCCCCCCCEEEEECCCHHHHHCCCCHHHCCCCCCCCCCCCHHCCC PDEATCGRLAKTGFNDCIASGKDHKFCTREFTKTAGLRACDKAHPCREDYICTAGYDDLP CCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCEEEECCCCCCC QAKPGEGTCIPPYFIFQFRVDGHPRSWVQDVRE CCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA