Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471888
Identifier: 13471888
GI number: 13471888
Start: 1647342
End: 1648211
Strand: Reverse
Name: 13471888
Synonym: mll2007
Alternate gene names: NA
Gene position: 1648211-1647342 (Counterclockwise)
Preceding gene: 13471889
Following gene: 13471886
Centisome position: 23.43
GC content: 69.08
Gene sequence:
>870_bases GTGAGCGAAATGCATGGCGCAGGGAGGATGATGACAGTGAAAAAATGCGTCGCGGCCGCATTGACGATCGGCATCGCGAT CGGGCCTGCGTCGGCTCTCGATGCAGGCGTAGGCGGCAAGGTCGGCGGCCTCGGGCTCGGTGCTGGAGTGAGCGCCGGCT CGAAAGGCGCATCCGTAGGGGTGGGCGCGAGCGTCGGCGGTGTCGGCGGAGCAAACGTCGGCGCTTCGGTCGGCGCAGGC AACGCAGGCGTCGACGCCAGCGGCAATGTTGGCAACGCAGGCGTCAGTGCCAGCGGCAATGTCGGCTCCGCAGGCGTCAG TGCCGGCGGCAACGTTGGCGCCACAGGCGGAGGCCTTTCGACAGGTGTCGGCCTGGGCGCCGATCCGTCCGCCGAAACCG GATCGGTGGCCGCTTCCGGTGGTTCGGCCGCCGCCGCGACAGCCAGCGGTTCTGCCACGACAGGCTCTGCCGCGACAGGC TCTGCCGCGACGGCCACTGCCACGACTGCCACTGCCAAGACCGCCAGGCAATCGATCGCCCTGCCGACCGTCCTCAGGCC CACCAAAGCCGGTCAGGGCGACCTCGCCAGGGGATATCCCTTTGCACCCCTGGAAGCGCTGAAAGCCAAACCCGGCACGC CAGCCGCGGTCGTGCTGGCCTGTCGCGCCGCGATCATGTCCGCCGCCAAGCCGCTTGGCGCCGTTCGTGTCCGCGCGGTC AGCGCAGGTGCCTTGCGTCGACGTGGGGGTGCGCTGACGGCGCCGATCCAGGTGCGAATAGACTATGCAGGACGCGGTGG CATCGAAGTCCGGCAAGCGCAGGTCGGTTGTCGCCTCGACGCTGCGGGCAGGGTCACAGCGATTAGATAG
Upstream 100 bases:
>100_bases AAGGTGAAGGGTCCAAGGTCACCGCAACCTGTCCTGCTGGCAACCTTCGCTCTTCCCCCCGCATTGCTGCCAACCCGACC ACTTTCGCAGTGAAAGACAG
Downstream 100 bases:
>100_bases CGCCAAACCTGCACCACGGCATACGGCGCTGCACCAACGTCGTCGCCCGGGTTGGTCCGGTATGAGCGGCCCGCTACCCC TTCCGCTTCTCCACCTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSEMHGAGRMMTVKKCVAAALTIGIAIGPASALDAGVGGKVGGLGLGAGVSAGSKGASVGVGASVGGVGGANVGASVGAG NAGVDASGNVGNAGVSASGNVGSAGVSAGGNVGATGGGLSTGVGLGADPSAETGSVAASGGSAAAATASGSATTGSAATG SAATATATTATAKTARQSIALPTVLRPTKAGQGDLARGYPFAPLEALKAKPGTPAAVVLACRAAIMSAAKPLGAVRVRAV SAGALRRRGGALTAPIQVRIDYAGRGGIEVRQAQVGCRLDAAGRVTAIR
Sequences:
>Translated_289_residues MSEMHGAGRMMTVKKCVAAALTIGIAIGPASALDAGVGGKVGGLGLGAGVSAGSKGASVGVGASVGGVGGANVGASVGAG NAGVDASGNVGNAGVSASGNVGSAGVSAGGNVGATGGGLSTGVGLGADPSAETGSVAASGGSAAAATASGSATTGSAATG SAATATATTATAKTARQSIALPTVLRPTKAGQGDLARGYPFAPLEALKAKPGTPAAVVLACRAAIMSAAKPLGAVRVRAV SAGALRRRGGALTAPIQVRIDYAGRGGIEVRQAQVGCRLDAAGRVTAIR >Mature_288_residues SEMHGAGRMMTVKKCVAAALTIGIAIGPASALDAGVGGKVGGLGLGAGVSAGSKGASVGVGASVGGVGGANVGASVGAGN AGVDASGNVGNAGVSASGNVGSAGVSAGGNVGATGGGLSTGVGLGADPSAETGSVAASGGSAAAATASGSATTGSAATGS AATATATTATAKTARQSIALPTVLRPTKAGQGDLARGYPFAPLEALKAKPGTPAAVVLACRAAIMSAAKPLGAVRVRAVS AGALRRRGGALTAPIQVRIDYAGRGGIEVRQAQVGCRLDAAGRVTAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26495; Mature: 26364
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMHGAGRMMTVKKCVAAALTIGIAIGPASALDAGVGGKVGGLGLGAGVSAGSKGASVG CCCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC VGASVGGVGGANVGASVGAGNAGVDASGNVGNAGVSASGNVGSAGVSAGGNVGATGGGLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGVGLGADPSAETGSVAASGGSAAAATASGSATTGSAATGSAATATATTATAKTARQSIA CCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC LPTVLRPTKAGQGDLARGYPFAPLEALKAKPGTPAAVVLACRAAIMSAAKPLGAVRVRAV CCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE SAGALRRRGGALTAPIQVRIDYAGRGGIEVRQAQVGCRLDAAGRVTAIR CHHHHHHCCCCEECEEEEEEEECCCCCCEEEEEECCEEECCCCCEEEEC >Mature Secondary Structure SEMHGAGRMMTVKKCVAAALTIGIAIGPASALDAGVGGKVGGLGLGAGVSAGSKGASVG CCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC VGASVGGVGGANVGASVGAGNAGVDASGNVGNAGVSASGNVGSAGVSAGGNVGATGGGLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGVGLGADPSAETGSVAASGGSAAAATASGSATTGSAATGSAATATATTATAKTARQSIA CCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC LPTVLRPTKAGQGDLARGYPFAPLEALKAKPGTPAAVVLACRAAIMSAAKPLGAVRVRAV CCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE SAGALRRRGGALTAPIQVRIDYAGRGGIEVRQAQVGCRLDAAGRVTAIR CHHHHHHCCCCEECEEEEEEEECCCCCCEEEEEECCEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA