Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471889
Identifier: 13471889
GI number: 13471889
Start: 1648219
End: 1649982
Strand: Reverse
Name: 13471889
Synonym: mll2008
Alternate gene names: NA
Gene position: 1649982-1648219 (Counterclockwise)
Preceding gene: 13471891
Following gene: 13471888
Centisome position: 23.45
GC content: 62.13
Gene sequence:
>1764_bases ATGGCGATGGCATCGTCGTGCCCAGGGTCGCAGTCCAGGATGATCTTTTCCATGGTGGGCACCTCCCTTGTTGGCCGAAC CTATGGGCACAAGAGGCTGGCACGCGCGGGCAGTCAAGGTTTTGGTGCTCGACCACTCCAGAGCCAGCTTCCCGCTTGGG TCCGGATGGCCAAGTCTCTTATCGAGGCCACCCGCCGGTGCATCACCGTTGCTGATTCAAACGGAGCCGTCTTTGCAGCA TGGAGCAGAGGAAAACTCCATTCGTTCGTTCGAATGACAACAAGCAGCGAAATAGGAGGTAGCGTCCAGGTGACGCGGCA TCCAGCGCCGTGGCTCGAACTGAGTGGAGAATACGATCGCGGTGAGGGTCGCGCCAGGTGGAGTCAAGTGATGAATCATT TGCAGGGTACCAGGTCCAAATGTCTGCGCCTTGACTTCACCTTTACCAAACGACGGCCTTCGATCTTCCTTCACGGGATA TCTGGCAGCGGGTGGAACGCTGTGCCGTCCCTCGTTTCGTCAATCCTCGTTCTGCTGTTGGCATCTCCGGCAAACAGCCA GCTGGCGCCGGATGCGTCCGCGACTGCAGCCAATGACCGTTCGCCGGTCGCGGTTTCGGAGCGCACCGATATTGCGAGAG GCGATGATGAGCAGGCCTTACGTCGCGAACTGGCCGCGGCACGGGCTGAATTGGCCAGGCAAGCGCAGGCCCTGAAAGAG CAGAAGCTGACGGACGAATCGCTCACGCTCAATCTGGAGACGGCGCAGCGAGCCATCGAAAATTTCAGGGCGGAAGCCAG TCTCTGGGACAGCAAGAAAGGCGCGAAGCCTGAAGCACCCCCGGATGCCTCCCAGGCCGCCGCGAAGCAGGCGCCGGATG AGGAGCGGCATAAAGTGGAGCGCCTGGAACAGGAACTCGCCACGGCCCGCCAGACGATCGATGCTCTCAAGACAGGCGCA AATCTGGCCGTCTCTGAGCAGGCCAAGGTCGTGAAGGACCAGCAAACGGCCGACGCCGCCGCGAAGCAGGCGCTGGATGA GGAGCGCCGTAAAGTCGAGCTCCTGGAACAGGAACTCGCCACGGCTCGTCAGACGATCGAAGCTTTCAAGACAGGCGCAA ATCTGGCTGCAGCGGAGCAGGCCAAGGTGGTGAAGGACCAGCAAGCGGCCGACGCCGCCGCGACGCAGGCGCTGGATGGG GAGCGCCATAAAGTCGAGCTCAAGGAACAGGAACTCGCCACGGCTCGCCAGACGATCGATGCGCTCAAGACAGGCGCAAA TCTGGCCGCAGCGGAGCAGGCCAAGGCCGTGAAGGACAGGCAAGTGGCCGACGCCGCTGCAAACCAGGCTCGAAATGCGC TCGAACTGGAACGTCAACGGGCAGATACAGCCATGCGTGACCTCGATAGTGCGCATAGGGAAAGCGACGCCTTGAAACAG AGCTCGATGGACTTGAGCGCGGCGCTGGACCAGGAGCGTGAAAGGGCCAACGGCCTGGCACGCAGCCTCAGTGCCGCGCG CGAGGAAATCGACAGCGCCAAGATCGACGGCACCAAGGAAAAACGTCGGACCGCGGCCGTGGTGCGCGCGCCCAAGGCCT CCAAGACCGCGCTTGCAAGTTCGCCGTCGCGTCCGGTCGCGGCCCGTAAACCGGGCGTGCCGAAAAAACGGAAGGTGAAG GGTCCAAGGTCACCGCAACCTGTCCTGCTGGCAACCTTCGCTCTTCCCCCCGCATTGCTGCCAACCCGACCACTTTCGCA GTGA
Upstream 100 bases:
>100_bases CACGGAAAGCGCATTGCGCGTGGTGTTCTCGACATTGTGGTTGCCCGAAACCGTGGTGATGCCGAGGAGGTCGATCTTCG GGTTTCCGGCCGCGAGCAGA
Downstream 100 bases:
>100_bases AAGACAGGTGAGCGAAATGCATGGCGCAGGGAGGATGATGACAGTGAAAAAATGCGTCGCGGCCGCATTGACGATCGGCA TCGCGATCGGGCCTGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MAMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSLIEATRRCITVADSNGAVFAA WSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDRGEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGI SGSGWNAVPSLVSSILVLLLASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVERLEQELATARQTIDALKTGA NLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELATARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDG ERHKVELKEQELATARQTIDALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALASSPSRPVAARKPGVPKKRKVK GPRSPQPVLLATFALPPALLPTRPLSQ
Sequences:
>Translated_587_residues MAMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSLIEATRRCITVADSNGAVFAA WSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDRGEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGI SGSGWNAVPSLVSSILVLLLASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVERLEQELATARQTIDALKTGA NLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELATARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDG ERHKVELKEQELATARQTIDALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALASSPSRPVAARKPGVPKKRKVK GPRSPQPVLLATFALPPALLPTRPLSQ >Mature_586_residues AMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSLIEATRRCITVADSNGAVFAAW SRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDRGEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGIS GSGWNAVPSLVSSILVLLLASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKEQ KLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVERLEQELATARQTIDALKTGAN LAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELATARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDGE RHKVELKEQELATARQTIDALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQS SMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALASSPSRPVAARKPGVPKKRKVKG PRSPQPVLLATFALPPALLPTRPLSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63280; Mature: 63149
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHH IEATRRCITVADSNGAVFAAWSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDR HHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC GEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGISGSGWNAVPSLVSSILVLLL CCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH ASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVE HHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH RLEQELATARQTIDALKTGANLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELA HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDGERHKVELKEQELATARQTID HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHH ALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALAS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCC SPSRPVAARKPGVPKKRKVKGPRSPQPVLLATFALPPALLPTRPLSQ CCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHH IEATRRCITVADSNGAVFAAWSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDR HHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC GEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGISGSGWNAVPSLVSSILVLLL CCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH ASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVE HHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH RLEQELATARQTIDALKTGANLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELA HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDGERHKVELKEQELATARQTID HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHH ALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALAS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCC SPSRPVAARKPGVPKKRKVKGPRSPQPVLLATFALPPALLPTRPLSQ CCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA