Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471889

Identifier: 13471889

GI number: 13471889

Start: 1648219

End: 1649982

Strand: Reverse

Name: 13471889

Synonym: mll2008

Alternate gene names: NA

Gene position: 1649982-1648219 (Counterclockwise)

Preceding gene: 13471891

Following gene: 13471888

Centisome position: 23.45

GC content: 62.13

Gene sequence:

>1764_bases
ATGGCGATGGCATCGTCGTGCCCAGGGTCGCAGTCCAGGATGATCTTTTCCATGGTGGGCACCTCCCTTGTTGGCCGAAC
CTATGGGCACAAGAGGCTGGCACGCGCGGGCAGTCAAGGTTTTGGTGCTCGACCACTCCAGAGCCAGCTTCCCGCTTGGG
TCCGGATGGCCAAGTCTCTTATCGAGGCCACCCGCCGGTGCATCACCGTTGCTGATTCAAACGGAGCCGTCTTTGCAGCA
TGGAGCAGAGGAAAACTCCATTCGTTCGTTCGAATGACAACAAGCAGCGAAATAGGAGGTAGCGTCCAGGTGACGCGGCA
TCCAGCGCCGTGGCTCGAACTGAGTGGAGAATACGATCGCGGTGAGGGTCGCGCCAGGTGGAGTCAAGTGATGAATCATT
TGCAGGGTACCAGGTCCAAATGTCTGCGCCTTGACTTCACCTTTACCAAACGACGGCCTTCGATCTTCCTTCACGGGATA
TCTGGCAGCGGGTGGAACGCTGTGCCGTCCCTCGTTTCGTCAATCCTCGTTCTGCTGTTGGCATCTCCGGCAAACAGCCA
GCTGGCGCCGGATGCGTCCGCGACTGCAGCCAATGACCGTTCGCCGGTCGCGGTTTCGGAGCGCACCGATATTGCGAGAG
GCGATGATGAGCAGGCCTTACGTCGCGAACTGGCCGCGGCACGGGCTGAATTGGCCAGGCAAGCGCAGGCCCTGAAAGAG
CAGAAGCTGACGGACGAATCGCTCACGCTCAATCTGGAGACGGCGCAGCGAGCCATCGAAAATTTCAGGGCGGAAGCCAG
TCTCTGGGACAGCAAGAAAGGCGCGAAGCCTGAAGCACCCCCGGATGCCTCCCAGGCCGCCGCGAAGCAGGCGCCGGATG
AGGAGCGGCATAAAGTGGAGCGCCTGGAACAGGAACTCGCCACGGCCCGCCAGACGATCGATGCTCTCAAGACAGGCGCA
AATCTGGCCGTCTCTGAGCAGGCCAAGGTCGTGAAGGACCAGCAAACGGCCGACGCCGCCGCGAAGCAGGCGCTGGATGA
GGAGCGCCGTAAAGTCGAGCTCCTGGAACAGGAACTCGCCACGGCTCGTCAGACGATCGAAGCTTTCAAGACAGGCGCAA
ATCTGGCTGCAGCGGAGCAGGCCAAGGTGGTGAAGGACCAGCAAGCGGCCGACGCCGCCGCGACGCAGGCGCTGGATGGG
GAGCGCCATAAAGTCGAGCTCAAGGAACAGGAACTCGCCACGGCTCGCCAGACGATCGATGCGCTCAAGACAGGCGCAAA
TCTGGCCGCAGCGGAGCAGGCCAAGGCCGTGAAGGACAGGCAAGTGGCCGACGCCGCTGCAAACCAGGCTCGAAATGCGC
TCGAACTGGAACGTCAACGGGCAGATACAGCCATGCGTGACCTCGATAGTGCGCATAGGGAAAGCGACGCCTTGAAACAG
AGCTCGATGGACTTGAGCGCGGCGCTGGACCAGGAGCGTGAAAGGGCCAACGGCCTGGCACGCAGCCTCAGTGCCGCGCG
CGAGGAAATCGACAGCGCCAAGATCGACGGCACCAAGGAAAAACGTCGGACCGCGGCCGTGGTGCGCGCGCCCAAGGCCT
CCAAGACCGCGCTTGCAAGTTCGCCGTCGCGTCCGGTCGCGGCCCGTAAACCGGGCGTGCCGAAAAAACGGAAGGTGAAG
GGTCCAAGGTCACCGCAACCTGTCCTGCTGGCAACCTTCGCTCTTCCCCCCGCATTGCTGCCAACCCGACCACTTTCGCA
GTGA

Upstream 100 bases:

>100_bases
CACGGAAAGCGCATTGCGCGTGGTGTTCTCGACATTGTGGTTGCCCGAAACCGTGGTGATGCCGAGGAGGTCGATCTTCG
GGTTTCCGGCCGCGAGCAGA

Downstream 100 bases:

>100_bases
AAGACAGGTGAGCGAAATGCATGGCGCAGGGAGGATGATGACAGTGAAAAAATGCGTCGCGGCCGCATTGACGATCGGCA
TCGCGATCGGGCCTGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 586

Protein sequence:

>587_residues
MAMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSLIEATRRCITVADSNGAVFAA
WSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDRGEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGI
SGSGWNAVPSLVSSILVLLLASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE
QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVERLEQELATARQTIDALKTGA
NLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELATARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDG
ERHKVELKEQELATARQTIDALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ
SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALASSPSRPVAARKPGVPKKRKVK
GPRSPQPVLLATFALPPALLPTRPLSQ

Sequences:

>Translated_587_residues
MAMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSLIEATRRCITVADSNGAVFAA
WSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDRGEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGI
SGSGWNAVPSLVSSILVLLLASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE
QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVERLEQELATARQTIDALKTGA
NLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELATARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDG
ERHKVELKEQELATARQTIDALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ
SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALASSPSRPVAARKPGVPKKRKVK
GPRSPQPVLLATFALPPALLPTRPLSQ
>Mature_586_residues
AMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSLIEATRRCITVADSNGAVFAAW
SRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDRGEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGIS
GSGWNAVPSLVSSILVLLLASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKEQ
KLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVERLEQELATARQTIDALKTGAN
LAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELATARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDGE
RHKVELKEQELATARQTIDALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQS
SMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALASSPSRPVAARKPGVPKKRKVKG
PRSPQPVLLATFALPPALLPTRPLSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63280; Mature: 63149

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHH
IEATRRCITVADSNGAVFAAWSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDR
HHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC
GEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGISGSGWNAVPSLVSSILVLLL
CCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
ASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVE
HHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH
RLEQELATARQTIDALKTGANLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELA
HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDGERHKVELKEQELATARQTID
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHH
ALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALAS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCC
SPSRPVAARKPGVPKKRKVKGPRSPQPVLLATFALPPALLPTRPLSQ
CCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AMASSCPGSQSRMIFSMVGTSLVGRTYGHKRLARAGSQGFGARPLQSQLPAWVRMAKSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHH
IEATRRCITVADSNGAVFAAWSRGKLHSFVRMTTSSEIGGSVQVTRHPAPWLELSGEYDR
HHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC
GEGRARWSQVMNHLQGTRSKCLRLDFTFTKRRPSIFLHGISGSGWNAVPSLVSSILVLLL
CCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
ASPANSQLAPDASATAANDRSPVAVSERTDIARGDDEQALRRELAAARAELARQAQALKE
CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKLTDESLTLNLETAQRAIENFRAEASLWDSKKGAKPEAPPDASQAAAKQAPDEERHKVE
HHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH
RLEQELATARQTIDALKTGANLAVSEQAKVVKDQQTADAAAKQALDEERRKVELLEQELA
HHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TARQTIEAFKTGANLAAAEQAKVVKDQQAADAAATQALDGERHKVELKEQELATARQTID
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHH
ALKTGANLAAAEQAKAVKDRQVADAAANQARNALELERQRADTAMRDLDSAHRESDALKQ
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMDLSAALDQERERANGLARSLSAAREEIDSAKIDGTKEKRRTAAVVRAPKASKTALAS
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHCC
SPSRPVAARKPGVPKKRKVKGPRSPQPVLLATFALPPALLPTRPLSQ
CCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA