| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471812
Identifier: 13471812
GI number: 13471812
Start: 1569373
End: 1570593
Strand: Reverse
Name: 13471812
Synonym: mll1909
Alternate gene names: NA
Gene position: 1570593-1569373 (Counterclockwise)
Preceding gene: 13471816
Following gene: 13471810
Centisome position: 22.32
GC content: 73.46
Gene sequence:
>1221_bases ATGGACTCGCTGATCACCGCGGCGGCGCTGGCGCTGGCGGCGGGCGATCCGCTCGGCGCGCTCGACCGCGTCGCCTTGCG CGAGGACGCGCCGGCGCTGGCGCTGCGTGGCATCGCCATGGCGCAGCTCGGCGATTTCGATCGCGCCAAGCTTCTGTTGC GGCGGGCCGCGCGCGCCTTCAGCCCGAAAGAGGCTGTCGCGCGCGCCAGATGCGTCGTCGCCGAAGCCGAGATCGCGCTG GTCTCGCGTGATCTGGGCTGGCCGGCCAAGGCGCTCGACGCGGCGCGCACGACGCTGGAAAAGCATGGCGACCGGCTGAA CGCGGCGCATGCCGGCCACCTCAAAGTGCGGCGCCTGCTGCTGATCGGCCGGCTCGACGAGGCCGAGCATGTGCTGGCCG GGCTCGACCCGACGCCGCTGCCGCCGGCCGCGCGGGCCGCGCATGAGCTCGCCGTCGCCGGCATCGCCATGCGGCGCCTG CGGACCCGGCCGGCGCGCGCGGCGTTGGAATGGGCACGCAACGCCGCCCGGCAGGCGGGCATTCCAGGCCTCATGGCCGA GGTCGCCACCGCATCCCTGGCGCTGGAAACGCCGGCGGCGCGGCTGATCACGCAAGGTACGGAGCGGCCGTTGCTGCTCG AAGAGGTCGAGGCGCTGCAGGCATCGCCGGCGCTGGTCGTCGATGCCTTTCGCTACGCCGTGCGTGCAGGGGACAGAACG GTTTCGCTGGCCAGCCGGCCGGTGCTGTTCGCGCTGGCGCGCGCATTTGCTGAAGCCTGGCCCGGGGATGTATCGCGCGA AGAGCTCGTGGCGCGGGCCTTTGGCGGCAAGCATGCCGATGAATCGCACCGCGCCCGGCTGCGCGTCGAGATCGGCCGGC TGCGCGCTGAGCTTGCCGCGCTGGCCGACATCAGCGCCACCAAGCGCGGCTTCACGCTGGCGCCGCGCCTGGCGCGCGCG GTGATGGTGCTGGCGCGGCCGATCGAGGAGCGCCACGCCGCCGTTCTGGCCTTGCTGGCCGATGGCGAAGCCTGGTCGAC CTCGGCGCTCGCGCTGGCGCTCGCAACCGGCCAGCGCAGCGTGCAGCGGGCGCTCGAACCGCTCGCCGAGGCCGGCAAAG TGCAGTCTTTCGGCCATGGCCGGGCGCGTCGCTGGATGACGCCGCCGGTGGCCGGATTCACGACCACCTTGTTACTCCCG GCGCCGCTGCCGAACGGCTAA
Upstream 100 bases:
>100_bases AGGTCTCCATCGGGCCAACGCCGCTTGCTGACCGGCGGTGGTGATTTAAGTTAGGGCGCAAACGTGCCGGGGTGGGAGTT ACAAGTGTGACGGGATTTGA
Downstream 100 bases:
>100_bases GGTGCGGCGATATTCAGGTGAGGCCGGCCTAGCTGCGCCCTGCGTGAGCCCTTGGATGACGACCACGATCGAGGATCAAG ACATGAAACATTCACCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDSLITAAALALAAGDPLGALDRVALREDAPALALRGIAMAQLGDFDRAKLLLRRAARAFSPKEAVARARCVVAEAEIAL VSRDLGWPAKALDAARTTLEKHGDRLNAAHAGHLKVRRLLLIGRLDEAEHVLAGLDPTPLPPAARAAHELAVAGIAMRRL RTRPARAALEWARNAARQAGIPGLMAEVATASLALETPAARLITQGTERPLLLEEVEALQASPALVVDAFRYAVRAGDRT VSLASRPVLFALARAFAEAWPGDVSREELVARAFGGKHADESHRARLRVEIGRLRAELAALADISATKRGFTLAPRLARA VMVLARPIEERHAAVLALLADGEAWSTSALALALATGQRSVQRALEPLAEAGKVQSFGHGRARRWMTPPVAGFTTTLLLP APLPNG
Sequences:
>Translated_406_residues MDSLITAAALALAAGDPLGALDRVALREDAPALALRGIAMAQLGDFDRAKLLLRRAARAFSPKEAVARARCVVAEAEIAL VSRDLGWPAKALDAARTTLEKHGDRLNAAHAGHLKVRRLLLIGRLDEAEHVLAGLDPTPLPPAARAAHELAVAGIAMRRL RTRPARAALEWARNAARQAGIPGLMAEVATASLALETPAARLITQGTERPLLLEEVEALQASPALVVDAFRYAVRAGDRT VSLASRPVLFALARAFAEAWPGDVSREELVARAFGGKHADESHRARLRVEIGRLRAELAALADISATKRGFTLAPRLARA VMVLARPIEERHAAVLALLADGEAWSTSALALALATGQRSVQRALEPLAEAGKVQSFGHGRARRWMTPPVAGFTTTLLLP APLPNG >Mature_406_residues MDSLITAAALALAAGDPLGALDRVALREDAPALALRGIAMAQLGDFDRAKLLLRRAARAFSPKEAVARARCVVAEAEIAL VSRDLGWPAKALDAARTTLEKHGDRLNAAHAGHLKVRRLLLIGRLDEAEHVLAGLDPTPLPPAARAAHELAVAGIAMRRL RTRPARAALEWARNAARQAGIPGLMAEVATASLALETPAARLITQGTERPLLLEEVEALQASPALVVDAFRYAVRAGDRT VSLASRPVLFALARAFAEAWPGDVSREELVARAFGGKHADESHRARLRVEIGRLRAELAALADISATKRGFTLAPRLARA VMVLARPIEERHAAVLALLADGEAWSTSALALALATGQRSVQRALEPLAEAGKVQSFGHGRARRWMTPPVAGFTTTLLLP APLPNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43076; Mature: 43076
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLITAAALALAAGDPLGALDRVALREDAPALALRGIAMAQLGDFDRAKLLLRRAARAF CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC SPKEAVARARCVVAEAEIALVSRDLGWPAKALDAARTTLEKHGDRLNAAHAGHLKVRRLL CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LIGRLDEAEHVLAGLDPTPLPPAARAAHELAVAGIAMRRLRTRPARAALEWARNAARQAG HHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC IPGLMAEVATASLALETPAARLITQGTERPLLLEEVEALQASPALVVDAFRYAVRAGDRT CCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE VSLASRPVLFALARAFAEAWPGDVSREELVARAFGGKHADESHRARLRVEIGRLRAELAA EEHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LADISATKRGFTLAPRLARAVMVLARPIEERHAAVLALLADGEAWSTSALALALATGQRS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCHHH VQRALEPLAEAGKVQSFGHGRARRWMTPPVAGFTTTLLLPAPLPNG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCC >Mature Secondary Structure MDSLITAAALALAAGDPLGALDRVALREDAPALALRGIAMAQLGDFDRAKLLLRRAARAF CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHC SPKEAVARARCVVAEAEIALVSRDLGWPAKALDAARTTLEKHGDRLNAAHAGHLKVRRLL CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH LIGRLDEAEHVLAGLDPTPLPPAARAAHELAVAGIAMRRLRTRPARAALEWARNAARQAG HHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC IPGLMAEVATASLALETPAARLITQGTERPLLLEEVEALQASPALVVDAFRYAVRAGDRT CCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCE VSLASRPVLFALARAFAEAWPGDVSREELVARAFGGKHADESHRARLRVEIGRLRAELAA EEHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LADISATKRGFTLAPRLARAVMVLARPIEERHAAVLALLADGEAWSTSALALALATGQRS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHCHHH VQRALEPLAEAGKVQSFGHGRARRWMTPPVAGFTTTLLLPAPLPNG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA