| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yqhE [C]
Identifier: 13471810
GI number: 13471810
Start: 1567687
End: 1568517
Strand: Reverse
Name: yqhE [C]
Synonym: mll1906
Alternate gene names: 13471810
Gene position: 1568517-1567687 (Counterclockwise)
Preceding gene: 13471812
Following gene: 13471808
Centisome position: 22.29
GC content: 63.78
Gene sequence:
>831_bases ATGCCCGAACTGATCACGCTGAACGACGGCGCCGCCATTCCCCAGCTAGGCCTTGGCGTGTGGCAGGTCGATCACGGCAT CACCGCCGATGTCGTGGGCTGGGCGATCAAGGCCGGCTACCGGCTGATCGACACCGCGCAGGGTTACCAGAACGAGGAAG GCGTCGGCGAGGCGATCCGCGCCGCCGATGTGGCGAGAAGCGAGCTGTACATCACCTCGAAGCTGCGCAACGGCGCGCAC GAGCGCGACGCGGCCCTGCGCGCTTTCGACGACACGATGGAAAAGCTCGGCATCGAGCAGATCGACCTGTTCCTGATCCA CTGGCCGGTGCCCAGCCGCGACAAATATGTCGAGGCCTGGAAGACCCTCATCGAACTGAAGCAGGCCGGCCGCATCAAGT CGATCGGCGTTTCGAATTTCAACAGGGACCATCTGGAGCGCATCATCGGCGAGACCGGCGTGGTTCCGGTGGCCAACCAG ATCGAGCTGCATCCGCGCTTCCAGCAGCGCGAGCTCAGGGAATTTCATGCCGGGCATAACATCCAAACGGAGAGCTGGAG CCCGCTCGGCAGCGGCCGGCTGCTCGGCGACCCGACGATCGCCGGCATTGCCAAGAAGCACGGCAAGTCGGCCGCGCAGA CGATCATCCGCTGGCATCTCCAGCAAGGGCTGATCGTCATTCCCAAATCGGTCCGCCAGGACCGCATCGCGGCCAATTTC GATGTCTTCGACTTCGAACTGGACGCGCAGGACCTGAAGACGATCGCGGGCATGGATTCGGCTGATGGCCGCGACGGCCC GAACCCGGCGACGGCGGCTTTTTTGTTTTAA
Upstream 100 bases:
>100_bases CGGCGAATTTATCCGCCGGCGACTGGCCGTCGTCCCGGCGCGTGCCTAGATAGGCTGGGTCGGGCGACCGCCCGGACATT TCTTCGTAAAGGACCCGACC
Downstream 100 bases:
>100_bases AGAGCCGGCGATGAAGCCGCCGATCTCCCCCCTCGTGGGGGTTGAGGAGTGGTCCGCATAGCGGACAGAAAGCCAATTGC TTGGCTTTCTGAACGACGAA
Product: oxidoreductase
Products: 2-keto-L-gulonate; NADP [C]
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPELITLNDGAAIPQLGLGVWQVDHGITADVVGWAIKAGYRLIDTAQGYQNEEGVGEAIRAADVARSELYITSKLRNGAH ERDAALRAFDDTMEKLGIEQIDLFLIHWPVPSRDKYVEAWKTLIELKQAGRIKSIGVSNFNRDHLERIIGETGVVPVANQ IELHPRFQQRELREFHAGHNIQTESWSPLGSGRLLGDPTIAGIAKKHGKSAAQTIIRWHLQQGLIVIPKSVRQDRIAANF DVFDFELDAQDLKTIAGMDSADGRDGPNPATAAFLF
Sequences:
>Translated_276_residues MPELITLNDGAAIPQLGLGVWQVDHGITADVVGWAIKAGYRLIDTAQGYQNEEGVGEAIRAADVARSELYITSKLRNGAH ERDAALRAFDDTMEKLGIEQIDLFLIHWPVPSRDKYVEAWKTLIELKQAGRIKSIGVSNFNRDHLERIIGETGVVPVANQ IELHPRFQQRELREFHAGHNIQTESWSPLGSGRLLGDPTIAGIAKKHGKSAAQTIIRWHLQQGLIVIPKSVRQDRIAANF DVFDFELDAQDLKTIAGMDSADGRDGPNPATAAFLF >Mature_275_residues PELITLNDGAAIPQLGLGVWQVDHGITADVVGWAIKAGYRLIDTAQGYQNEEGVGEAIRAADVARSELYITSKLRNGAHE RDAALRAFDDTMEKLGIEQIDLFLIHWPVPSRDKYVEAWKTLIELKQAGRIKSIGVSNFNRDHLERIIGETGVVPVANQI ELHPRFQQRELREFHAGHNIQTESWSPLGSGRLLGDPTIAGIAKKHGKSAAQTIIRWHLQQGLIVIPKSVRQDRIAANFD VFDFELDAQDLKTIAGMDSADGRDGPNPATAAFLF
Specific function: Reduction [C]
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Homo sapiens, GI223468663, Length=293, Percent_Identity=38.2252559726962, Blast_Score=195, Evalue=3e-50, Organism=Homo sapiens, GI4502049, Length=293, Percent_Identity=39.9317406143345, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI310109922, Length=277, Percent_Identity=37.1841155234657, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI5453543, Length=295, Percent_Identity=35.2542372881356, Blast_Score=184, Evalue=9e-47, Organism=Homo sapiens, GI24497583, Length=295, Percent_Identity=35.9322033898305, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI310109920, Length=295, Percent_Identity=34.9152542372881, Blast_Score=181, Evalue=5e-46, Organism=Homo sapiens, GI45446745, Length=295, Percent_Identity=34.9152542372881, Blast_Score=181, Evalue=6e-46, Organism=Homo sapiens, GI4503285, Length=295, Percent_Identity=34.9152542372881, Blast_Score=181, Evalue=6e-46, Organism=Homo sapiens, GI5174695, Length=294, Percent_Identity=35.3741496598639, Blast_Score=174, Evalue=6e-44, Organism=Homo sapiens, GI24497577, Length=289, Percent_Identity=32.5259515570934, Blast_Score=174, Evalue=8e-44, Organism=Homo sapiens, GI5174391, Length=289, Percent_Identity=32.5259515570934, Blast_Score=174, Evalue=8e-44, Organism=Homo sapiens, GI93277124, Length=294, Percent_Identity=33.3333333333333, Blast_Score=173, Evalue=1e-43, Organism=Homo sapiens, GI24497585, Length=293, Percent_Identity=34.1296928327645, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI291291012, Length=268, Percent_Identity=36.5671641791045, Blast_Score=169, Evalue=2e-42, Organism=Homo sapiens, GI300116273, Length=277, Percent_Identity=35.7400722021661, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI300116271, Length=274, Percent_Identity=31.3868613138686, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI310109924, Length=148, Percent_Identity=40.5405405405405, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI310109926, Length=119, Percent_Identity=35.2941176470588, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI207028673, Length=119, Percent_Identity=35.2941176470588, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI87082198, Length=270, Percent_Identity=54.0740740740741, Blast_Score=285, Evalue=2e-78, Organism=Escherichia coli, GI1786400, Length=258, Percent_Identity=37.984496124031, Blast_Score=178, Evalue=4e-46, Organism=Escherichia coli, GI1788081, Length=272, Percent_Identity=26.4705882352941, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI48994888, Length=204, Percent_Identity=28.921568627451, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1788070, Length=221, Percent_Identity=25.3393665158371, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17537077, Length=308, Percent_Identity=38.6363636363636, Blast_Score=191, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17537075, Length=302, Percent_Identity=38.4105960264901, Blast_Score=187, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17564128, Length=294, Percent_Identity=33.6734693877551, Blast_Score=171, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71998625, Length=265, Percent_Identity=34.7169811320755, Blast_Score=170, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17561298, Length=269, Percent_Identity=33.457249070632, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17550248, Length=288, Percent_Identity=36.4583333333333, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17552492, Length=263, Percent_Identity=32.319391634981, Blast_Score=154, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17537079, Length=299, Percent_Identity=29.7658862876254, Blast_Score=152, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17538386, Length=273, Percent_Identity=31.8681318681319, Blast_Score=149, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17566692, Length=285, Percent_Identity=30.1754385964912, Blast_Score=143, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17561300, Length=272, Percent_Identity=30.1470588235294, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17562292, Length=286, Percent_Identity=28.6713286713287, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324694, Length=291, Percent_Identity=36.0824742268041, Blast_Score=193, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320576, Length=290, Percent_Identity=37.9310344827586, Blast_Score=189, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6321896, Length=308, Percent_Identity=33.1168831168831, Blast_Score=171, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322556, Length=276, Percent_Identity=31.1594202898551, Blast_Score=154, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6319625, Length=275, Percent_Identity=35.2727272727273, Blast_Score=153, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320079, Length=282, Percent_Identity=29.7872340425532, Blast_Score=122, Evalue=6e-29, Organism=Drosophila melanogaster, GI24662781, Length=275, Percent_Identity=40.3636363636364, Blast_Score=177, Evalue=6e-45, Organism=Drosophila melanogaster, GI24662785, Length=278, Percent_Identity=40.6474820143885, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI24662789, Length=293, Percent_Identity=35.4948805460751, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI20129731, Length=281, Percent_Identity=35.9430604982206, Blast_Score=174, Evalue=5e-44, Organism=Drosophila melanogaster, GI24663317, Length=289, Percent_Identity=33.2179930795848, Blast_Score=174, Evalue=6e-44, Organism=Drosophila melanogaster, GI24657054, Length=275, Percent_Identity=35.6363636363636, Blast_Score=171, Evalue=6e-43, Organism=Drosophila melanogaster, GI24644950, Length=300, Percent_Identity=32.3333333333333, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI21356425, Length=297, Percent_Identity=32.996632996633, Blast_Score=164, Evalue=6e-41, Organism=Drosophila melanogaster, GI221378297, Length=320, Percent_Identity=30.3125, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI45553081, Length=286, Percent_Identity=30.0699300699301, Blast_Score=153, Evalue=9e-38, Organism=Drosophila melanogaster, GI281366140, Length=252, Percent_Identity=30.1587301587302, Blast_Score=134, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30513; Mature: 30382
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00798 ALDOKETO_REDUCTASE_1 ; PS00062 ALDOKETO_REDUCTASE_2 ; PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELITLNDGAAIPQLGLGVWQVDHGITADVVGWAIKAGYRLIDTAQGYQNEEGVGEAIR CCCEEECCCCCCCCHHCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHH AADVARSELYITSKLRNGAHERDAALRAFDDTMEKLGIEQIDLFLIHWPVPSRDKYVEAW HHHHHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHH KTLIELKQAGRIKSIGVSNFNRDHLERIIGETGVVPVANQIELHPRFQQRELREFHAGHN HHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCC IQTESWSPLGSGRLLGDPTIAGIAKKHGKSAAQTIIRWHLQQGLIVIPKSVRQDRIAANF CCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCC DVFDFELDAQDLKTIAGMDSADGRDGPNPATAAFLF CEEEEEECHHHHHHHHCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure PELITLNDGAAIPQLGLGVWQVDHGITADVVGWAIKAGYRLIDTAQGYQNEEGVGEAIR CCEEECCCCCCCCHHCCCEEEECCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHH AADVARSELYITSKLRNGAHERDAALRAFDDTMEKLGIEQIDLFLIHWPVPSRDKYVEAW HHHHHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHH KTLIELKQAGRIKSIGVSNFNRDHLERIIGETGVVPVANQIELHPRFQQRELREFHAGHN HHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCC IQTESWSPLGSGRLLGDPTIAGIAKKHGKSAAQTIIRWHLQQGLIVIPKSVRQDRIAANF CCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCC DVFDFELDAQDLKTIAGMDSADGRDGPNPATAAFLF CEEEEEECHHHHHHHHCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2,5-diketo-D-gluconate; NADPH [C]
Specific reaction: 2,5-diketo-D-gluconate + NADPH = 2-keto-L-gulonate + NADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA