Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 13471173

GI number: 13471173

Start: 897904

End: 898245

Strand: Reverse

Name: yajC [H]

Synonym: mll1072

Alternate gene names: 13471173

Gene position: 898245-897904 (Counterclockwise)

Preceding gene: 13471175

Following gene: 13471172

Centisome position: 12.77

GC content: 61.4

Gene sequence:

>342_bases
ATGTTCGTGACACCGGCATACGCCCAAGGCATTGGCGGCGCCTCTCCCGATATGTTCATCAGCATTTTGCCGTTTGTCCT
GATTTTCGTGATCATGTATTTTCTCATCATCCGCCCGCAGCGCACGCAGCTGAAGAAGCGCGGCGAGATGCTGGCGGCGG
TCCGCCGCGGCGACACGGTCGTCACCGGCGGCGGTTTCGTCGGCAAGGTGACGAAGGTGATCGACGACAACGAGCTCGAG
ATCGACCTCGGCGGTGGCACCAAGGTGACGGCGCTGCGCTCGACGATCGCCGATGTGCGCGTCAAGGGCGAACCGGTGGC
CAACCAGAACGCCAAGAAATAA

Upstream 100 bases:

>100_bases
TGACAACTTTACCGACTATATTCCGGCCAAATTTCACGGAGCCGCCAAATTTCATAGCACTCGGTTTGGCGGCTGTTTTT
CAAAATTCAGGAGTACCTCG

Downstream 100 bases:

>100_bases
CCCAATTCAAGGCGGAGCGATCCGCGGACACGCTCTGACGGACGACGCCATATGCTGTATTTTTCGCGCTTCAAGATGAT
CCTGATTTGGGTGGCCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MFVTPAYAQGIGGASPDMFISILPFVLIFVIMYFLIIRPQRTQLKKRGEMLAAVRRGDTVVTGGGFVGKVTKVIDDNELE
IDLGGGTKVTALRSTIADVRVKGEPVANQNAKK

Sequences:

>Translated_113_residues
MFVTPAYAQGIGGASPDMFISILPFVLIFVIMYFLIIRPQRTQLKKRGEMLAAVRRGDTVVTGGGFVGKVTKVIDDNELE
IDLGGGTKVTALRSTIADVRVKGEPVANQNAKK
>Mature_113_residues
MFVTPAYAQGIGGASPDMFISILPFVLIFVIMYFLIIRPQRTQLKKRGEMLAAVRRGDTVVTGGGFVGKVTKVIDDNELE
IDLGGGTKVTALRSTIADVRVKGEPVANQNAKK

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=82, Percent_Identity=39.0243902439024, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12196; Mature: 12196

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVTPAYAQGIGGASPDMFISILPFVLIFVIMYFLIIRPQRTQLKKRGEMLAAVRRGDTV
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEE
VTGGGFVGKVTKVIDDNELEIDLGGGTKVTALRSTIADVRVKGEPVANQNAKK
EECCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MFVTPAYAQGIGGASPDMFISILPFVLIFVIMYFLIIRPQRTQLKKRGEMLAAVRRGDTV
CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEE
VTGGGFVGKVTKVIDDNELEIDLGGGTKVTALRSTIADVRVKGEPVANQNAKK
EECCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]