Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is folE
Identifier: 13471052
GI number: 13471052
Start: 744830
End: 745423
Strand: Direct
Name: folE
Synonym: mlr0922
Alternate gene names: 13471052
Gene position: 744830-745423 (Clockwise)
Preceding gene: 13471050
Following gene: 13471053
Centisome position: 10.59
GC content: 63.8
Gene sequence:
>594_bases ATGGAAAAGCCGGTCACCGACCGACCGAGCGAAGCCGAGGTCGAGGCGGCCGTGCGCACATTGCTGCGCTGGACCGGCGA CAATCCGGACCGCGAGGGGCTGATCGATACGCCCAAGCGCGTGGCCAAGGCCTTCCGCGAAATGTTCGGCGGCTACGACA TGTGCCCGGCCGAGGAGCTCGGCCGCACCTTCGAGGAGGTCGCCGGCTACGACGATCTCGTCATAGTGAAGGATATTCAC TTCCATTCGCATTGCGAGCACCACATGGTGCCGATCATCGGCAAGGCGCATGTCGGCTATCTGCCGGATGGCAAGGTCGT CGGCCTGTCGAAGATCGCGCGCGTCGTCGATATCTTCGCCCATCGCCTGCAGACGCAGGAAGCACTGACCGCGCAAATCG CCGGCGTCATCCAGGATGTGCTCAATCCGCGCGGCGTCGCCGTCATGATTGAGGCCGAGCACATGTGCATGGCCATGCGC GGCATCCGCAAGCAGGGCTCCACCACCCTCACCTCCACCTTCACCGGCGTTTTCAAGGATACGCCCGAGGAGCAGGTTCG TTTCGTCACCATGGTTCGCGGCGGCGGGGCATAA
Upstream 100 bases:
>100_bases AGGTCGTGGTCCGTTCAACTCGTTCCTCCTTGGAGAGGAACTACGGGAGACGCCTTTTATGGATGCCGTCATAAAGAAAC TCATGCCCCAGTCCGCCTAC
Downstream 100 bases:
>100_bases CGTCTAGGCCGATATCGCTAGGCCATGATCCCGAAAAACGCGGACCGGTTTTCTCTGGACAAACGAAAACGTTTGTCCAG AGATCATGGTCAAATAGGAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MEKPVTDRPSEAEVEAAVRTLLRWTGDNPDREGLIDTPKRVAKAFREMFGGYDMCPAEELGRTFEEVAGYDDLVIVKDIH FHSHCEHHMVPIIGKAHVGYLPDGKVVGLSKIARVVDIFAHRLQTQEALTAQIAGVIQDVLNPRGVAVMIEAEHMCMAMR GIRKQGSTTLTSTFTGVFKDTPEEQVRFVTMVRGGGA
Sequences:
>Translated_197_residues MEKPVTDRPSEAEVEAAVRTLLRWTGDNPDREGLIDTPKRVAKAFREMFGGYDMCPAEELGRTFEEVAGYDDLVIVKDIH FHSHCEHHMVPIIGKAHVGYLPDGKVVGLSKIARVVDIFAHRLQTQEALTAQIAGVIQDVLNPRGVAVMIEAEHMCMAMR GIRKQGSTTLTSTFTGVFKDTPEEQVRFVTMVRGGGA >Mature_197_residues MEKPVTDRPSEAEVEAAVRTLLRWTGDNPDREGLIDTPKRVAKAFREMFGGYDMCPAEELGRTFEEVAGYDDLVIVKDIH FHSHCEHHMVPIIGKAHVGYLPDGKVVGLSKIARVVDIFAHRLQTQEALTAQIAGVIQDVLNPRGVAVMIEAEHMCMAMR GIRKQGSTTLTSTFTGVFKDTPEEQVRFVTMVRGGGA
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=197, Percent_Identity=45.6852791878173, Blast_Score=180, Evalue=7e-46, Organism=Homo sapiens, GI4503949, Length=197, Percent_Identity=45.6852791878173, Blast_Score=180, Evalue=7e-46, Organism=Homo sapiens, GI66932970, Length=184, Percent_Identity=41.304347826087, Blast_Score=134, Evalue=5e-32, Organism=Homo sapiens, GI66932972, Length=155, Percent_Identity=45.1612903225806, Blast_Score=132, Evalue=1e-31, Organism=Escherichia coli, GI1788476, Length=163, Percent_Identity=42.3312883435583, Blast_Score=117, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17560486, Length=177, Percent_Identity=46.8926553672316, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321706, Length=183, Percent_Identity=47.5409836065574, Blast_Score=171, Evalue=5e-44, Organism=Drosophila melanogaster, GI24656782, Length=193, Percent_Identity=47.6683937823834, Blast_Score=170, Evalue=6e-43, Organism=Drosophila melanogaster, GI24656796, Length=193, Percent_Identity=47.6683937823834, Blast_Score=169, Evalue=9e-43, Organism=Drosophila melanogaster, GI24656791, Length=193, Percent_Identity=47.6683937823834, Blast_Score=169, Evalue=1e-42,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_RHILO (Q98LQ6)
Other databases:
- EMBL: BA000012 - RefSeq: NP_102621.1 - ProteinModelPortal: Q98LQ6 - SMR: Q98LQ6 - GeneID: 1225284 - GenomeReviews: BA000012_GR - KEGG: mlo:mlr0922 - NMPDR: fig|266835.1.peg.726 - HOGENOM: HBG370191 - OMA: LTTTFTG - ProtClustDB: PRK09347 - BRENDA: 3.5.4.16 - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 21774; Mature: 21774
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPVTDRPSEAEVEAAVRTLLRWTGDNPDREGLIDTPKRVAKAFREMFGGYDMCPAEEL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH GRTFEEVAGYDDLVIVKDIHFHSHCEHHMVPIIGKAHVGYLPDGKVVGLSKIARVVDIFA HHHHHHHCCCCCEEEEEECCHHHCCCCCCCEEECCCCCCCCCCCCEECHHHHHHHHHHHH HRLQTQEALTAQIAGVIQDVLNPRGVAVMIEAEHMCMAMRGIRKQGSTTLTSTFTGVFKD HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCC TPEEQVRFVTMVRGGGA CHHHHHEEHEEECCCCC >Mature Secondary Structure MEKPVTDRPSEAEVEAAVRTLLRWTGDNPDREGLIDTPKRVAKAFREMFGGYDMCPAEEL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH GRTFEEVAGYDDLVIVKDIHFHSHCEHHMVPIIGKAHVGYLPDGKVVGLSKIARVVDIFA HHHHHHHCCCCCEEEEEECCHHHCCCCCCCEEECCCCCCCCCCCCEECHHHHHHHHHHHH HRLQTQEALTAQIAGVIQDVLNPRGVAVMIEAEHMCMAMRGIRKQGSTTLTSTFTGVFKD HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCC TPEEQVRFVTMVRGGGA CHHHHHEEHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968