Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is sam [H]

Identifier: 13471009

GI number: 13471009

Start: 693663

End: 694544

Strand: Direct

Name: sam [H]

Synonym: mlr0868

Alternate gene names: 13471009

Gene position: 693663-694544 (Clockwise)

Preceding gene: 13471007

Following gene: 13471013

Centisome position: 9.86

GC content: 64.63

Gene sequence:

>882_bases
ATGGCACCCACCCCCTCGATCCCCAAGGCCGCGTTCTGGATGGCGCTGTCGATTAGCTCTTTCCTGGCGATGTCGGTCGC
CGGCCGCGCCACCACAGCCGAACTCAACGTCTTCCAGGTGCTGGAACTGCGCTCGGTGATCGGCTTCTTCATCCTCTTGC
CGCTGGTGCTGACGAGCGGCGGCTTCGCGGCGATGCGCACGCAGCGTCCCCTCGCCCATATCGCCCGCAACGTCGTCCAC
TATAGTGGGCAGGCGGCATGGCTCTACGCCTTGACGCTGATCCCGCTGGCGGTGCTCATCTCGATCGAATTCACCACGCC
GATCTGGACGGCGATCCTGGCGGTGACTTTTCTTGGCGAAAGGCTGAGCCGGCCGAAACTGGCGGCTGTCGGGCTCGGGC
TGATCGGCGTGGTGGTCATCGTCCGTCCAGGCGTCGACGCGGTCGATCCCGGACATCTGGTCGTGCTGGGCGCCGCGGTC
TGTTTCGGCATCTCGCTGGTGCTGGTCAAATCGCTGACGCGCACCGACAGCGTCGTGCGCATCATCTTCTGGATGCTGAT
CATCCAGTCGGCGCTCGGCCTCGTCCCCGCGCTCTACGTGTGGCGCACGCCATCGCTCGAACTGTGGCCCTGGATCCTGC
TGATCGCATTCACCGGCATGTCGTCGCATTTCTGCATGGCCCGCGCGCTCACCTATGCCGACGCCACCGTCATCTCGCCA
ATGGATTTCCTGCGGGTGCCCTTGTCGGCGCTGGTCGGCTGGCTGCTTTATCACGAGCAGATCGACGCTTTCACCGCTGG
CGGCGCGCTGCTGATCCTGATGGGCAATCTCCTCAATCTGCAGCGCAAACCGGTGCAGCCGGCTGAAGTGGCGGCATCGT
AG

Upstream 100 bases:

>100_bases
GCAACATGGCCGTCTTGCAACATCACGCCATTGCAACTGGCCCAGAAGAATGGAGCGACTAGCGATTGCGGCAAAAGCCC
CGGCCTGCGAGATAGCTGCC

Downstream 100 bases:

>100_bases
CGCCCGTTAGGTGTATTGAGATTCAGGTCAACCGAGTCGAGAACGGTAGGTTCCGAGAACCGGAACGGAGCGTACATTTT
GGTACGTGAGTACAGTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAPTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSGGFAAMRTQRPLAHIARNVVH
YSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAV
CFGISLVLVKSLTRTDSVVRIIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP
MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS

Sequences:

>Translated_293_residues
MAPTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSGGFAAMRTQRPLAHIARNVVH
YSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAV
CFGISLVLVKSLTRTDSVVRIIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP
MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS
>Mature_292_residues
APTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSGGFAAMRTQRPLAHIARNVVHY
SGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGERLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAVC
FGISLVLVKSLTRTDSVVRIIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISPM
DFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31598; Mature: 31467

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFAAMRTQRPLAHIARNVVHYSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGE
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAVCFGISLVLVKSLTRTDSVVR
HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH
MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure 
APTPSIPKAAFWMALSISSFLAMSVAGRATTAELNVFQVLELRSVIGFFILLPLVLTSG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GFAAMRTQRPLAHIARNVVHYSGQAAWLYALTLIPLAVLISIEFTTPIWTAILAVTFLGE
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RLSRPKLAAVGLGLIGVVVIVRPGVDAVDPGHLVVLGAAVCFGISLVLVKSLTRTDSVVR
HHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIFWMLIIQSALGLVPALYVWRTPSLELWPWILLIAFTGMSSHFCMARALTYADATVISP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCH
MDFLRVPLSALVGWLLYHEQIDAFTAGGALLILMGNLLNLQRKPVQPAEVAAS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]