Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is yhjG [H]
Identifier: 13471001
GI number: 13471001
Start: 684236
End: 685786
Strand: Reverse
Name: yhjG [H]
Synonym: mll0858
Alternate gene names: 13471001
Gene position: 685786-684236 (Counterclockwise)
Preceding gene: 161621454
Following gene: 13471000
Centisome position: 9.75
GC content: 63.83
Gene sequence:
>1551_bases ATGGCGTACAAGGGGCTTGCGGCAAGACCCGGCTCCTCCCGTAAAACCCACGCAAATCAGGCGCGAAAACGGGAGTGGCG ATTGACGATTTCAGAGCATGCGGTGGTGATCGCCGGGGGCGGTCCGACAGGATTGATGCTGGCGGGGGAACTCGCTTTGG CGGGCATCGACGTTGCCATTGTCGAGCGGCGCCCGGACCAGCAGCTGATCGGGTTGCGCGCGGGTGGCCTGCACGCACGT ACCATCGAAATTCTCGATCAGCGCGGAATTGCCGACCGGTTTCTCTCGCAGGGGCAGAGCTTCCCGACCGTCGGTTTCCA CATGATCCGGTTGGATATCAGCGACTTTCCCAGCCGGCACAACTATCTGCTGGCGCTGCGACAAAACCACATCGAGCGGA TATTGGTCGACTGGATCGACGAGTTGGGGGTGCCGATCTATCGCGGACAGGACGTCACCGGCTTCGCGCAGGATGATGAT GGTGTCGACCTGGATCTGTCCGGAGGCCAACGGCTGCGGGCGCAATACCTCATCGGCTGCGATGGAGGGCGCAGCACGAT CCGCAAGGCGGCGGGCATTGAGTTCCCCGGATGGGATCCGACGATGAGTTGGATGATCGCCGAGGTCGAGATGTCTGGGG AGCCGGCATTGGGCTTTCGCAGCGATGCCTACGGGATTCATGCGATAGGCAAGATCGAGGAAAACGGCCGGGTGGGTGTC GTGCTTACCGAGAGGCAATTGACCATTGGCGGCGAACCGACGCTGGCCGATCTGCGTGAAGCACTTGTCGCTGTCTATGG CACCGATTACGGGGTCCACAGTCCAACCTGGATTTCCCGCTTCACCGACATGACACGCCAGGCCGCCGCCTACCGCGACA GACGCGTCCTCCTGGCCGGCGACGCCGCGCACATCCATCCGCCGATGGGCGGGCAGGGGCTTAATATCGGCGTCCAGGAC GCGGTCAATCTGGGGTGGAAGCTGGCCCAGGTGGTCAAGCTGATATCACCGGAAAGCCTTCTCGACAGCTATCACGCCGA GCGTCATCCGATCGCCGCGCGCGTGCTGCGCAACGCGAAGGCACAGGTTGCCCTTCGTCGTATCGATGCCAGCACCAAGG CATTGAACGACACCCTTACCGAGCTGCTTGGCATGGATGAACCGCGCAAACGGATCGCCGCGGAGATGTCCGGTCTGGGC ATCCATTACGATCTCGGCGCGGGACATCCACTGCTTGGGCGGCGGATGCCCGACCTCGACCTGGCCACGGCCAGCGGTCC AGTGCGGGTCTTCAGCCTGCTGCATGACGCCCGGCCGGTGCTTCTCAACCTCGGTGAACCAGGCGGACTGGACATTGCGC CCTGGGCGAATCGGGTCCGGCAGATCGAGGCAGGATATAATGGCACATGGGAGCTGCCGGTCCTCGGGACGGTCGCCCCG GCCGCTGCCGTGCTGATCCGGCCCGATGGCTATGTGGCCTGGGTCGGGATCGGAACCCAACACGGGCTGGCTGAGGCGCT GACCACCTGGTTCGGGCCGCCCGCCACTTAG
Upstream 100 bases:
>100_bases ATTTTTTGCCTGCAAGCAATCCGGGCTCCGGTCTTCGATCCACCGCCGTTGGCCGGCCGAAGCGATCCGCGCCGGAGAGC ACCCCTTCCATTTCATACAT
Downstream 100 bases:
>100_bases CCGATAGATCGAGGCGGACCACGCGATGTCCTCAAACGCATCGCGTGGCAGCTTGCGACAAGGCAAAAGCCGACTGCTCT CCTGACAATCGGTTGACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MAYKGLAARPGSSRKTHANQARKREWRLTISEHAVVIAGGGPTGLMLAGELALAGIDVAIVERRPDQQLIGLRAGGLHAR TIEILDQRGIADRFLSQGQSFPTVGFHMIRLDISDFPSRHNYLLALRQNHIERILVDWIDELGVPIYRGQDVTGFAQDDD GVDLDLSGGQRLRAQYLIGCDGGRSTIRKAAGIEFPGWDPTMSWMIAEVEMSGEPALGFRSDAYGIHAIGKIEENGRVGV VLTERQLTIGGEPTLADLREALVAVYGTDYGVHSPTWISRFTDMTRQAAAYRDRRVLLAGDAAHIHPPMGGQGLNIGVQD AVNLGWKLAQVVKLISPESLLDSYHAERHPIAARVLRNAKAQVALRRIDASTKALNDTLTELLGMDEPRKRIAAEMSGLG IHYDLGAGHPLLGRRMPDLDLATASGPVRVFSLLHDARPVLLNLGEPGGLDIAPWANRVRQIEAGYNGTWELPVLGTVAP AAAVLIRPDGYVAWVGIGTQHGLAEALTTWFGPPAT
Sequences:
>Translated_516_residues MAYKGLAARPGSSRKTHANQARKREWRLTISEHAVVIAGGGPTGLMLAGELALAGIDVAIVERRPDQQLIGLRAGGLHAR TIEILDQRGIADRFLSQGQSFPTVGFHMIRLDISDFPSRHNYLLALRQNHIERILVDWIDELGVPIYRGQDVTGFAQDDD GVDLDLSGGQRLRAQYLIGCDGGRSTIRKAAGIEFPGWDPTMSWMIAEVEMSGEPALGFRSDAYGIHAIGKIEENGRVGV VLTERQLTIGGEPTLADLREALVAVYGTDYGVHSPTWISRFTDMTRQAAAYRDRRVLLAGDAAHIHPPMGGQGLNIGVQD AVNLGWKLAQVVKLISPESLLDSYHAERHPIAARVLRNAKAQVALRRIDASTKALNDTLTELLGMDEPRKRIAAEMSGLG IHYDLGAGHPLLGRRMPDLDLATASGPVRVFSLLHDARPVLLNLGEPGGLDIAPWANRVRQIEAGYNGTWELPVLGTVAP AAAVLIRPDGYVAWVGIGTQHGLAEALTTWFGPPAT >Mature_515_residues AYKGLAARPGSSRKTHANQARKREWRLTISEHAVVIAGGGPTGLMLAGELALAGIDVAIVERRPDQQLIGLRAGGLHART IEILDQRGIADRFLSQGQSFPTVGFHMIRLDISDFPSRHNYLLALRQNHIERILVDWIDELGVPIYRGQDVTGFAQDDDG VDLDLSGGQRLRAQYLIGCDGGRSTIRKAAGIEFPGWDPTMSWMIAEVEMSGEPALGFRSDAYGIHAIGKIEENGRVGVV LTERQLTIGGEPTLADLREALVAVYGTDYGVHSPTWISRFTDMTRQAAAYRDRRVLLAGDAAHIHPPMGGQGLNIGVQDA VNLGWKLAQVVKLISPESLLDSYHAERHPIAARVLRNAKAQVALRRIDASTKALNDTLTELLGMDEPRKRIAAEMSGLGI HYDLGAGHPLLGRRMPDLDLATASGPVRVFSLLHDARPVLLNLGEPGGLDIAPWANRVRQIEAGYNGTWELPVLGTVAPA AAVLIRPDGYVAWVGIGTQHGLAEALTTWFGPPAT
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786543, Length=401, Percent_Identity=30.6733167082294, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: 1.14.13.-
Molecular weight: Translated: 55886; Mature: 55754
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYKGLAARPGSSRKTHANQARKREWRLTISEHAVVIAGGGPTGLMLAGELALAGIDVAI CCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCEEEEECCCCCCEEEECCCHHCCCEEEE VERRPDQQLIGLRAGGLHARTIEILDQRGIADRFLSQGQSFPTVGFHMIRLDISDFPSRH EECCCCHHEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCC NYLLALRQNHIERILVDWIDELGVPIYRGQDVTGFAQDDDGVDLDLSGGQRLRAQYLIGC CEEEEEHHHHHHHHHHHHHHHHCCCEECCCCCCEECCCCCCCEEECCCCCEEEEEEEEEC DGGRSTIRKAAGIEFPGWDPTMSWMIAEVEMSGEPALGFRSDAYGIHAIGKIEENGRVGV CCCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEE VLTERQLTIGGEPTLADLREALVAVYGTDYGVHSPTWISRFTDMTRQAAAYRDRRVLLAG EEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC DAAHIHPPMGGQGLNIGVQDAVNLGWKLAQVVKLISPESLLDSYHAERHPIAARVLRNAK CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHH AQVALRRIDASTKALNDTLTELLGMDEPRKRIAAEMSGLGIHYDLGAGHPLLGRRMPDLD HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCCCCCC LATASGPVRVFSLLHDARPVLLNLGEPGGLDIAPWANRVRQIEAGYNGTWELPVLGTVAP EECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEECCCEEECCCC AAAVLIRPDGYVAWVGIGTQHGLAEALTTWFGPPAT CEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure AYKGLAARPGSSRKTHANQARKREWRLTISEHAVVIAGGGPTGLMLAGELALAGIDVAI CCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCEEEEECCCCCCEEEECCCHHCCCEEEE VERRPDQQLIGLRAGGLHARTIEILDQRGIADRFLSQGQSFPTVGFHMIRLDISDFPSRH EECCCCHHEEEEECCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCC NYLLALRQNHIERILVDWIDELGVPIYRGQDVTGFAQDDDGVDLDLSGGQRLRAQYLIGC CEEEEEHHHHHHHHHHHHHHHHCCCEECCCCCCEECCCCCCCEEECCCCCEEEEEEEEEC DGGRSTIRKAAGIEFPGWDPTMSWMIAEVEMSGEPALGFRSDAYGIHAIGKIEENGRVGV CCCHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEE VLTERQLTIGGEPTLADLREALVAVYGTDYGVHSPTWISRFTDMTRQAAAYRDRRVLLAG EEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEC DAAHIHPPMGGQGLNIGVQDAVNLGWKLAQVVKLISPESLLDSYHAERHPIAARVLRNAK CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHH AQVALRRIDASTKALNDTLTELLGMDEPRKRIAAEMSGLGIHYDLGAGHPLLGRRMPDLD HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCHHCCCCCCCC LATASGPVRVFSLLHDARPVLLNLGEPGGLDIAPWANRVRQIEAGYNGTWELPVLGTVAP EECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEECCCEEECCCC AAAVLIRPDGYVAWVGIGTQHGLAEALTTWFGPPAT CEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]