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The map label for this gene is ugpB [C]

Identifier: 13470998

GI number: 13470998

Start: 680851

End: 682143

Strand: Reverse

Name: ugpB [C]

Synonym: mll0854

Alternate gene names: 13470998

Gene position: 682143-680851 (Counterclockwise)

Preceding gene: 13470999

Following gene: 13470997

Centisome position: 9.69

GC content: 60.48

Gene sequence:

>1293_bases
ATGGGAGTCTTGAACATGAAAAAACTGACCGTCATGCTTGCCACCGTTGCGGGGCTGGCGATTTCCGCCGGGAGCGCGCT
GGCCGATTCGACCCTCAAGATGGTCGAAGTCATCACCAGCCCGCCGCGCACCGAATTCCTGAAAAAACAGATCGCCGAGT
TCGAGGCTGCCAATCCCGGCGTCAAGGTCGAGCTGATCTCGCTGCCCTGGGGCCAAGCCTTCGAAAAGTTCCTGACCATG
GTGCAGGCCGGCGACACGCCCGACGTGGTCGAGATGCCGGAACGCTGGATGGGCCTCTATGCCAACAATGCCCAGCTCGA
GGACCTCGGTCCCTACATGGCCAAATGGGACGACGCCAAGACGCTTGGCGAGCGCGCCAAGCAGTTCGGCTCGACGGTCA
ACAACACCCAGTTCATGATCCCCTACGGCTACTATGTGAATGCGCTGTTCTGGAACAAGAAACTGTTCAAGCAAGCTGGC
CTCGACGGCCCGCCGGCGACGCTCGACGAGTTCGTCGCCGACTCCAAGAAGATCTCCGCCATTCCAGGCAAATACGGCTA
CTGCCTGCGCGGCGGACCCGGCGCCTTCAACGGCATGCACATGTTCATGAACATCGCCCAGGGCAAGGGCGGATACTTCA
ACAAGGACGGCACCTCGACCATCAATGAGGAGGGCTCGGTCAAGGGCCTGCAGATGCTGGCCGACATGTACAAGGACGGC
TTGGCGCCGAAGGATGCGGTGAGCTGGGGTTTCAACGAAACCGTCACCGGCTTCTATTCCGGCACCTGCGCCATGCTCAA
CCAGGATCCGGACGCGTTGCTCGGCATCGCCGACAAGATGAGCGCCGACGATTTCGCCGTGGCGCCGCTGCCGGTTGGCC
CGAGCGGCAAGTCCTATCCGACGCTCGGTTATGCCGGCTGGGCGATGTTCGCCAACTCGCAGCACAAGGACGATGCCTGG
AAGCTGATGGCGACGCTGCTCTCGCCCAAGGACAATCTCGAATGGGCCAAGGAAGTCGGCGTGGTGCCGATCCACAACGG
CGCCGACCAAGATCCGCATTTCAAGACCGAGCAGTTCAAGGGCTGGTTCACCGAGCTCAGCGACACCTCCAAATATGAAA
TGGTGACGCCGCCGACGCATCTGGAAAACCTCGGCAATTTCGTCGACCAGGTGGCGATCAAGAATTTCCAGGAAGTGCTG
CTGGGCCAAAAGACCGCCAAGGACGTCGCCGACCAATGGGCCGCCTTCCTGACCAAGGAACAGCAGGATTGGCTGGCGAA
AAACAAGAAGTAA

Upstream 100 bases:

>100_bases
GAACCATCCGCTTCAATGTCGGATTGGAAAGTGTCGAAGACCTCTGGGCCGACGTCGCCCAGGCCTTCGAAAAAGCCAGA
AAATAACAAGCGGGTTCAAA

Downstream 100 bases:

>100_bases
GCGCCTTCTTCCTTCTCCCCGTTTCACGGGGAGAAGGTGTCACGAAGTGACGGATGAGGGCAGCGCCATGCCCCGATAGG
CTTGCGCTGCCCCTCATCTG

Product: secreted solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MGVLNMKKLTVMLATVAGLAISAGSALADSTLKMVEVITSPPRTEFLKKQIAEFEAANPGVKVELISLPWGQAFEKFLTM
VQAGDTPDVVEMPERWMGLYANNAQLEDLGPYMAKWDDAKTLGERAKQFGSTVNNTQFMIPYGYYVNALFWNKKLFKQAG
LDGPPATLDEFVADSKKISAIPGKYGYCLRGGPGAFNGMHMFMNIAQGKGGYFNKDGTSTINEEGSVKGLQMLADMYKDG
LAPKDAVSWGFNETVTGFYSGTCAMLNQDPDALLGIADKMSADDFAVAPLPVGPSGKSYPTLGYAGWAMFANSQHKDDAW
KLMATLLSPKDNLEWAKEVGVVPIHNGADQDPHFKTEQFKGWFTELSDTSKYEMVTPPTHLENLGNFVDQVAIKNFQEVL
LGQKTAKDVADQWAAFLTKEQQDWLAKNKK

Sequences:

>Translated_430_residues
MGVLNMKKLTVMLATVAGLAISAGSALADSTLKMVEVITSPPRTEFLKKQIAEFEAANPGVKVELISLPWGQAFEKFLTM
VQAGDTPDVVEMPERWMGLYANNAQLEDLGPYMAKWDDAKTLGERAKQFGSTVNNTQFMIPYGYYVNALFWNKKLFKQAG
LDGPPATLDEFVADSKKISAIPGKYGYCLRGGPGAFNGMHMFMNIAQGKGGYFNKDGTSTINEEGSVKGLQMLADMYKDG
LAPKDAVSWGFNETVTGFYSGTCAMLNQDPDALLGIADKMSADDFAVAPLPVGPSGKSYPTLGYAGWAMFANSQHKDDAW
KLMATLLSPKDNLEWAKEVGVVPIHNGADQDPHFKTEQFKGWFTELSDTSKYEMVTPPTHLENLGNFVDQVAIKNFQEVL
LGQKTAKDVADQWAAFLTKEQQDWLAKNKK
>Mature_429_residues
GVLNMKKLTVMLATVAGLAISAGSALADSTLKMVEVITSPPRTEFLKKQIAEFEAANPGVKVELISLPWGQAFEKFLTMV
QAGDTPDVVEMPERWMGLYANNAQLEDLGPYMAKWDDAKTLGERAKQFGSTVNNTQFMIPYGYYVNALFWNKKLFKQAGL
DGPPATLDEFVADSKKISAIPGKYGYCLRGGPGAFNGMHMFMNIAQGKGGYFNKDGTSTINEEGSVKGLQMLADMYKDGL
APKDAVSWGFNETVTGFYSGTCAMLNQDPDALLGIADKMSADDFAVAPLPVGPSGKSYPTLGYAGWAMFANSQHKDDAWK
LMATLLSPKDNLEWAKEVGVVPIHNGADQDPHFKTEQFKGWFTELSDTSKYEMVTPPTHLENLGNFVDQVAIKNFQEVLL
GQKTAKDVADQWAAFLTKEQQDWLAKNKK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=298, Percent_Identity=25.8389261744966, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47146; Mature: 47015

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVLNMKKLTVMLATVAGLAISAGSALADSTLKMVEVITSPPRTEFLKKQIAEFEAANPG
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
VKVELISLPWGQAFEKFLTMVQAGDTPDVVEMPERWMGLYANNAQLEDLGPYMAKWDDAK
CEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHCCCCCHHHCCCHHHHCCHHH
TLGERAKQFGSTVNNTQFMIPYGYYVNALFWNKKLFKQAGLDGPPATLDEFVADSKKISA
HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEC
IPGKYGYCLRGGPGAFNGMHMFMNIAQGKGGYFNKDGTSTINEEGSVKGLQMLADMYKDG
CCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
LAPKDAVSWGFNETVTGFYSGTCAMLNQDPDALLGIADKMSADDFAVAPLPVGPSGKSYP
CCCHHHHHCCCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
TLGYAGWAMFANSQHKDDAWKLMATLLSPKDNLEWAKEVGVVPIHNGADQDPHFKTEQFK
CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCCCCHHHHH
GWFTELSDTSKYEMVTPPTHLENLGNFVDQVAIKNFQEVLLGQKTAKDVADQWAAFLTKE
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QQDWLAKNKK
HHHHHHCCCC
>Mature Secondary Structure 
GVLNMKKLTVMLATVAGLAISAGSALADSTLKMVEVITSPPRTEFLKKQIAEFEAANPG
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
VKVELISLPWGQAFEKFLTMVQAGDTPDVVEMPERWMGLYANNAQLEDLGPYMAKWDDAK
CEEEEEECCCHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHCCCCCHHHCCCHHHHCCHHH
TLGERAKQFGSTVNNTQFMIPYGYYVNALFWNKKLFKQAGLDGPPATLDEFVADSKKISA
HHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEC
IPGKYGYCLRGGPGAFNGMHMFMNIAQGKGGYFNKDGTSTINEEGSVKGLQMLADMYKDG
CCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
LAPKDAVSWGFNETVTGFYSGTCAMLNQDPDALLGIADKMSADDFAVAPLPVGPSGKSYP
CCCHHHHHCCCCCCCCHHCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCC
TLGYAGWAMFANSQHKDDAWKLMATLLSPKDNLEWAKEVGVVPIHNGADQDPHFKTEQFK
CCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCCCCCCCHHHHH
GWFTELSDTSKYEMVTPPTHLENLGNFVDQVAIKNFQEVLLGQKTAKDVADQWAAFLTKE
HHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
QQDWLAKNKK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA