Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470991
Identifier: 13470991
GI number: 13470991
Start: 674348
End: 675079
Strand: Direct
Name: 13470991
Synonym: mlr0843
Alternate gene names: NA
Gene position: 674348-675079 (Clockwise)
Preceding gene: 13470990
Following gene: 13470992
Centisome position: 9.58
GC content: 66.8
Gene sequence:
>732_bases ATGACCAAGGCGGATGTCGACAAGCTCGACAAGGGTCTCGCCGCACATGGCGGCCGGCCTCTGCGGCCGCGTGATGCCGC GACCCTGATCCTGCTCGACCGCAAGGGCGATGAGGTGCTGGTGCTGATGGGGCGCCGCCACGCCGGCCACGCCTTCATGC CTGGGAAATTCGTGTTTCCCGGTGGCCGTACCGATCCGGCCGACAGCCGCATCGCGACGGCCACCGCATTGCATCGCGAC GAGGAAGCGAAGCTGCTGGCTGGTCCCGGCCGCACCAGTGCCGCGCGGGCCCGCGCCGTCGCCTTGTCCGCAATTCGCGA GACCTATGAGGAAGCCGGTCTGCTCATCGGCGAGAGGGCCGCCTTTGCCACCGACAAGCGCGACTGGCAAGGTTTCGTCG AACACGGCGTCAGGCCTTCGCTCGAAACGCTGCGTTTCATCGCGCGCGCCATCACGCCGCCCAACCGGGTGCGCCGCTTC GATACGCGCTTCTTCAGCGCCTGGCGCAGCGATGTGGCCGTTGAACTGCCGGGCGGCGGTCCGACCAACGAACTTGAGGA ACTGGTCTGGCTGCCGCTTGCCAAGGCCAGGGAAGCCGACATACCCGACATCACCCGAATGATCCTGGACGAGTTGGAAA AACGCCTTGCCCATGATCCGCTGCTGCGTCCGGGCGGCCCCGTGCCCTTCTACCGGCTTGTCCGCAACCGCTTCACCCGC GAACTTCTGTAG
Upstream 100 bases:
>100_bases TCCCACCACGGCGCCTGATGCGCCACTGGCGCAACACGCCAATCGCTAAGGCCACTTTCGCATGCAAGAAGTTTCCGCTA GGTCCCTGCGCATGGAAGCA
Downstream 100 bases:
>100_bases AGCAATTCCAGGAAGAGTGTGACGCGGTTTTCCGCCCGGAATTGCGTAAGATCAACGAGACAGAGTATTCACTATCCCAT GACGGTCGATACCCAACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Nudix Family; Nudix Hydrolase; Hydrolase NUDIX Family; NUDIX Family Hydrolase; Hydrolase; LOW QUALITY PROTEIN NUDIX Hydrolase; Phosphohydrolase; MutT/Nudix Family Phosphohydrolase; NUDIX Superfamily Hydrolase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTKADVDKLDKGLAAHGGRPLRPRDAATLILLDRKGDEVLVLMGRRHAGHAFMPGKFVFPGGRTDPADSRIATATALHRD EEAKLLAGPGRTSAARARAVALSAIRETYEEAGLLIGERAAFATDKRDWQGFVEHGVRPSLETLRFIARAITPPNRVRRF DTRFFSAWRSDVAVELPGGGPTNELEELVWLPLAKAREADIPDITRMILDELEKRLAHDPLLRPGGPVPFYRLVRNRFTR ELL
Sequences:
>Translated_243_residues MTKADVDKLDKGLAAHGGRPLRPRDAATLILLDRKGDEVLVLMGRRHAGHAFMPGKFVFPGGRTDPADSRIATATALHRD EEAKLLAGPGRTSAARARAVALSAIRETYEEAGLLIGERAAFATDKRDWQGFVEHGVRPSLETLRFIARAITPPNRVRRF DTRFFSAWRSDVAVELPGGGPTNELEELVWLPLAKAREADIPDITRMILDELEKRLAHDPLLRPGGPVPFYRLVRNRFTR ELL >Mature_242_residues TKADVDKLDKGLAAHGGRPLRPRDAATLILLDRKGDEVLVLMGRRHAGHAFMPGKFVFPGGRTDPADSRIATATALHRDE EAKLLAGPGRTSAARARAVALSAIRETYEEAGLLIGERAAFATDKRDWQGFVEHGVRPSLETLRFIARAITPPNRVRRFD TRFFSAWRSDVAVELPGGGPTNELEELVWLPLAKAREADIPDITRMILDELEKRLAHDPLLRPGGPVPFYRLVRNRFTRE LL
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27009; Mature: 26878
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKADVDKLDKGLAAHGGRPLRPRDAATLILLDRKGDEVLVLMGRRHAGHAFMPGKFVFP CCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEECC GGRTDPADSRIATATALHRDEEAKLLAGPGRTSAARARAVALSAIRETYEEAGLLIGERA CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHH AFATDKRDWQGFVEHGVRPSLETLRFIARAITPPNRVRRFDTRFFSAWRSDVAVELPGGG HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCC PTNELEELVWLPLAKAREADIPDITRMILDELEKRLAHDPLLRPGGPVPFYRLVRNRFTR CHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ELL HCC >Mature Secondary Structure TKADVDKLDKGLAAHGGRPLRPRDAATLILLDRKGDEVLVLMGRRHAGHAFMPGKFVFP CCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCEECC GGRTDPADSRIATATALHRDEEAKLLAGPGRTSAARARAVALSAIRETYEEAGLLIGERA CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECHH AFATDKRDWQGFVEHGVRPSLETLRFIARAITPPNRVRRFDTRFFSAWRSDVAVELPGGG HHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCC PTNELEELVWLPLAKAREADIPDITRMILDELEKRLAHDPLLRPGGPVPFYRLVRNRFTR CHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ELL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA