Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470990

Identifier: 13470990

GI number: 13470990

Start: 673813

End: 674265

Strand: Direct

Name: 13470990

Synonym: mlr0842

Alternate gene names: NA

Gene position: 673813-674265 (Clockwise)

Preceding gene: 13470989

Following gene: 13470991

Centisome position: 9.58

GC content: 59.82

Gene sequence:

>453_bases
ATGCCAAAGGAATTAGGGATACAAGAACAGGTTTTCGGCGGTGAACATCACACTGGCCGGGTTGCCCGCCCCTTGTGGAC
GGCGATGAAGCGCGGCCTTTTGGGCCGCTGCCCGAACTGCGGCGAAGGCAAGCTGTTTCGCGGCTTCACCAAGACCGTCG
ACACCTGCAGCGTCTGTGGCGAGGAAATCCATCACCATCGCGCCGATGACCTGCCGGCCTATCTGGTCATTGTCATCGTC
GGCCACATCGTTCTCGGTGCGTTCATGGGCGTGGAAGCGACATCGACGCTCTCAACCTGGCAGCACATCCTCATCTGGGT
GCCTCTGACCATCATTTTGTCGGTTGCGCTGCTGCAGCCTGTCAAAGGTGCCGTCATAGGACTGCAATGGGCGTTCTATA
TGCACGGATTCGGTGGCGAAAAGGATGGGGCGGGCTCCCACCACGGCGCCTGA

Upstream 100 bases:

>100_bases
ACCCGAAGCCCCTGCCAGGCTCCACCAGGTCGTTTCACAAGGCCAAGGGCCGCGCCCGTGCGTCGCAATCGCGACCGGGT
TCGCGCGGCAGGAGACGATA

Downstream 100 bases:

>100_bases
TGCGCCACTGGCGCAACACGCCAATCGCTAAGGCCACTTTCGCATGCAAGAAGTTTCCGCTAGGTCCCTGCGCATGGAAG
CAATGACCAAGGCGGATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit III

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPKELGIQEQVFGGEHHTGRVARPLWTAMKRGLLGRCPNCGEGKLFRGFTKTVDTCSVCGEEIHHHRADDLPAYLVIVIV
GHIVLGAFMGVEATSTLSTWQHILIWVPLTIILSVALLQPVKGAVIGLQWAFYMHGFGGEKDGAGSHHGA

Sequences:

>Translated_150_residues
MPKELGIQEQVFGGEHHTGRVARPLWTAMKRGLLGRCPNCGEGKLFRGFTKTVDTCSVCGEEIHHHRADDLPAYLVIVIV
GHIVLGAFMGVEATSTLSTWQHILIWVPLTIILSVALLQPVKGAVIGLQWAFYMHGFGGEKDGAGSHHGA
>Mature_149_residues
PKELGIQEQVFGGEHHTGRVARPLWTAMKRGLLGRCPNCGEGKLFRGFTKTVDTCSVCGEEIHHHRADDLPAYLVIVIVG
HIVLGAFMGVEATSTLSTWQHILIWVPLTIILSVALLQPVKGAVIGLQWAFYMHGFGGEKDGAGSHHGA

Specific function: Unknown

COG id: COG5349

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16261; Mature: 16130

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKELGIQEQVFGGEHHTGRVARPLWTAMKRGLLGRCPNCGEGKLFRGFTKTVDTCSVCG
CCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EEIHHHRADDLPAYLVIVIVGHIVLGAFMGVEATSTLSTWQHILIWVPLTIILSVALLQP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGAVIGLQWAFYMHGFGGEKDGAGSHHGA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKELGIQEQVFGGEHHTGRVARPLWTAMKRGLLGRCPNCGEGKLFRGFTKTVDTCSVCG
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
EEIHHHRADDLPAYLVIVIVGHIVLGAFMGVEATSTLSTWQHILIWVPLTIILSVALLQP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGAVIGLQWAFYMHGFGGEKDGAGSHHGA
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA