Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470869
Identifier: 13470869
GI number: 13470869
Start: 533394
End: 533942
Strand: Direct
Name: 13470869
Synonym: mlr0682
Alternate gene names: NA
Gene position: 533394-533942 (Clockwise)
Preceding gene: 13470868
Following gene: 13470872
Centisome position: 7.58
GC content: 63.75
Gene sequence:
>549_bases GTGCCGGCAAGATCGATTCGGCGGCCGCGGCCTTTATTCTGCAGGGAGTCTTGGACCGGCTTCAGTCGCTCGATTCAGCC GCTCGAACGGAATTGGGCGGTCGAACGGAGCCGGGCCCGACCGACGCCGCTTGACCCAGTCCAGAATTTCGCGGCGGCGG CGAAAAGCCCATATCGCCATCAGCAGAAACCCGTCGAAGATACAGGCCTTTCCCACCATCCCCGGGATGATGGCCGGATC GATGCCGAGCATCTGGCCGTAAAGCTGGAACACGAAATCGTGCAGCTGCCGGGTCAGCATCACATAGCCGAAATTCATGT CGTTGAGCGACAGGTAGAACCAGCCCCAGAACAGCGCCATCGGGGCCGCCCACAATGCGAAGATATAGCGCATCAGCGGC CTCCCCTCCCGTTCGGCCCGGCCCGGCCCGATATCAGGGAAAGCAGCGAATTATGGGCCGCCGCCTTCGCCATGCTGTGC GCCGTGGCGCGAAAATCGGCGTCATCCGACGCGGCCGCGGAGCGCCGCTCGGCGAGCATCGCGACATAG
Upstream 100 bases:
>100_bases GCGCAGCTGAGCGACCTGCCCTTCGTGTTCTGGGATGAACGGCTGTCGACGGTGGCGGCCGAGAGGACGCTGATCGAAAT GGATTTCTCGCGCGCCAAAC
Downstream 100 bases:
>100_bases GAGGCCAGAAGCGCCGCCAATTGCACCGCAACGACCATGAACAGCCCGTTGATGCCTTGCGCGGCGCCACCGATCAGGAT CATCGACAGGACGCCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MPARSIRRPRPLFCRESWTGFSRSIQPLERNWAVERSRARPTPLDPVQNFAAAAKSPYRHQQKPVEDTGLSHHPRDDGRI DAEHLAVKLEHEIVQLPGQHHIAEIHVVERQVEPAPEQRHRGRPQCEDIAHQRPPLPFGPARPDIRESSELWAAAFAMLC AVARKSASSDAAAERRSASIAT
Sequences:
>Translated_182_residues MPARSIRRPRPLFCRESWTGFSRSIQPLERNWAVERSRARPTPLDPVQNFAAAAKSPYRHQQKPVEDTGLSHHPRDDGRI DAEHLAVKLEHEIVQLPGQHHIAEIHVVERQVEPAPEQRHRGRPQCEDIAHQRPPLPFGPARPDIRESSELWAAAFAMLC AVARKSASSDAAAERRSASIAT >Mature_181_residues PARSIRRPRPLFCRESWTGFSRSIQPLERNWAVERSRARPTPLDPVQNFAAAAKSPYRHQQKPVEDTGLSHHPRDDGRID AEHLAVKLEHEIVQLPGQHHIAEIHVVERQVEPAPEQRHRGRPQCEDIAHQRPPLPFGPARPDIRESSELWAAAFAMLCA VARKSASSDAAAERRSASIAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20521; Mature: 20390
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARSIRRPRPLFCRESWTGFSRSIQPLERNWAVERSRARPTPLDPVQNFAAAAKSPYRH CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH QQKPVEDTGLSHHPRDDGRIDAEHLAVKLEHEIVQLPGQHHIAEIHVVERQVEPAPEQRH HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH RGRPQCEDIAHQRPPLPFGPARPDIRESSELWAAAFAMLCAVARKSASSDAAAERRSASI CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC AT CC >Mature Secondary Structure PARSIRRPRPLFCRESWTGFSRSIQPLERNWAVERSRARPTPLDPVQNFAAAAKSPYRH CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHH QQKPVEDTGLSHHPRDDGRIDAEHLAVKLEHEIVQLPGQHHIAEIHVVERQVEPAPEQRH HCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHH RGRPQCEDIAHQRPPLPFGPARPDIRESSELWAAAFAMLCAVARKSASSDAAAERRSASI CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC AT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA