| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358111
GI number: 13358111
Start: 680986
End: 682002
Strand: Reverse
Name: Not Available
Synonym: UU547
Alternate gene names: NA
Gene position: 682002-680986 (Counterclockwise)
Preceding gene: 13358112
Following gene: 13358110
Centisome position: 90.73
GC content: 27.04
Gene sequence:
>1017_bases ATGAGTGTATTACATACAACTAATACTTCACAAGGTAATGGAATTAATTCATGACAATCAATTTTAATTTTTTTAGCATT TTTGATTGTTTTTATTATCTTTACAGTTATTAAAAAAATCTATTATTCAATTCGTTTTCAAAAGCGTTTTTATATTATTC CTAAAACTTCGGTTAAAGGGATTTCAAATATTGCTATGGTGATTTCGATTTCTGTTGCAGTGATTATATTATTAACAGTT TTATCAGCTAACACAGCTTCTGTAATTTTTCGTGCTTGACCAGGTACACGTGTTACTTTAGAAGGGATTCTTATTAAAAT TGGAGGTTTATTATTTGGTCCAATTTTAGGTATTTTTATTGGTGCAATGACTGATTTATTATCTGTGGCTATGACTGCTG GTGTATTTCATTATGGTTATTTAATTGCTGCTATGGCTTATGGATTAATTGGAGGACTAATTCGAATTATTCTAACTACT TCCAAAAAAAAGGATTTACCATTTGCAATTTATAGTTCAATGGCAACTATTTTAATTGGTGTAGGAATTGCCTTATTTTT ATATTTTGCTCCAGGAATTGGTGATAAGGGTTTTAATATTCAATTATTTGGTTTTGATATTAAAATTGCACGAACATTGA TGATTGGCATTATTTTAGGTTTTTTCTTATTATCAATTATCGTTGTTTGGTTTAGTTTATTGATAAAATATTGATTCAAT AAAAAAAATAAAGCTAAAACCAAAACAAATTGATTCATTATATTTGCCCCTGTTTTAGTAACAATTTTACTAACTGAAGC AGTGGTTAATGTACTAATGATGCCATCGTTTGATGCTGAATTATCAAGTCTAAAATATACACAATGATTATCAATTCGTG CTGTTTTATTTATTCCAATGGTGGTTTTAAACTTATTGATTATTTATCCAATTTTTAAAATTGTTGTTCCTTTAATTCGT TATGATTATGAAGATGATATTGTTGAGGATAAACATATTCCAATTCATGTTGACTAA
Upstream 100 bases:
>100_bases AACATTTTAGTAAATGCAATGATTATTTAATTAAACATTTACGCACTCCAATAAAATGATAAAATTTATTAATTAGTGAG GTGAATCTGTGACAAATATA
Downstream 100 bases:
>100_bases TAAAGAAAAGAGAAATTAAGATGAGTTATAATTTACAAAAATTAATGTCATCATGCATGTTTATATTAACTGATGATGAA ATTAAACAGGTTGAAAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSVLHTTNTSQGNGINSWQSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGISNIAMVISISVAVIILLTV LSANTASVIFRAWPGTRVTLEGILIKIGGLLFGPILGIFIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRIILTT SKKKDLPFAIYSSMATILIGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKYWFN KKNKAKTKTNWFIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQWLSIRAVLFIPMVVLNLLIIYPIFKIVVPLIR YDYEDDIVEDKHIPIHVD
Sequences:
>Translated_338_residues MSVLHTTNTSQGNGINS*QSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGISNIAMVISISVAVIILLTV LSANTASVIFRA*PGTRVTLEGILIKIGGLLFGPILGIFIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRIILTT SKKKDLPFAIYSSMATILIGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKY*FN KKNKAKTKTN*FIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQ*LSIRAVLFIPMVVLNLLIIYPIFKIVVPLIR YDYEDDIVEDKHIPIHVD >Mature_337_residues SVLHTTNTSQGNGINS*QSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGISNIAMVISISVAVIILLTVL SANTASVIFRA*PGTRVTLEGILIKIGGLLFGPILGIFIGAMTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRIILTTS KKKDLPFAIYSSMATILIGVGIALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKY*FNK KNKAKTKTN*FIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQ*LSIRAVLFIPMVVLNLLIIYPIFKIVVPLIRY DYEDDIVEDKHIPIHVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the gatC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003837 [H]
Pfam domain/function: PF02686 Glu-tRNAGln [H]
EC number: NA
Molecular weight: Translated: 36729; Mature: 36598
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLHTTNTSQGNGINSQSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGI CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHH SNIAMVISISVAVIILLTVLSANTASVIFRAPGTRVTLEGILIKIGGLLFGPILGIFIGA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHH MTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRIILTTSKKKDLPFAIYSSMATILIGVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKYFNKKN HHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KAKTKTNFIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQLSIRAVLFIPMVVLNL CCCHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIIYPIFKIVVPLIRYDYEDDIVEDKHIPIHVD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC >Mature Secondary Structure SVLHTTNTSQGNGINSQSILIFLAFLIVFIIFTVIKKIYYSIRFQKRFYIIPKTSVKGI CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCHH SNIAMVISISVAVIILLTVLSANTASVIFRAPGTRVTLEGILIKIGGLLFGPILGIFIGA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHH MTDLLSVAMTAGVFHYGYLIAAMAYGLIGGLIRIILTTSKKKDLPFAIYSSMATILIGVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH IALFLYFAPGIGDKGFNIQLFGFDIKIARTLMIGIILGFFLLSIIVVWFSLLIKYFNKKN HHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KAKTKTNFIIFAPVLVTILLTEAVVNVLMMPSFDAELSSLKYTQLSIRAVLFIPMVVLNL CCCHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIIYPIFKIVVPLIRYDYEDDIVEDKHIPIHVD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]