Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358110

GI number: 13358110

Start: 680681

End: 680965

Strand: Reverse

Name: Not Available

Synonym: UU546

Alternate gene names: NA

Gene position: 680965-680681 (Counterclockwise)

Preceding gene: 13358111

Following gene: 13358109

Centisome position: 90.59

GC content: 21.05

Gene sequence:

>285_bases
ATGAGTTATAATTTACAAAAATTAATGTCATCATGCATGTTTATATTAACTGATGATGAAATTAAACAGGTTGAAAATCG
TTTAAATAATTTATTTAATGAAATTAAAGTTTTTGAGCTTTTTAATTTACAAAATATAACACCTTTTGAAATTATTAATA
AATCCTTTGATAATTTTTTACGAGAAGATGAAATTAATTCTTGTGTAGGTAATAATAGCGAAGAAGTTCTAAATAATTGC
CTAAAAGTAATCGATCATTATGGGGTATTAAAAAATGAAAAATAA

Upstream 100 bases:

>100_bases
AAATTGTTGTTCCTTTAATTCGTTATGATTATGAAGATGATATTGTTGAGGATAAACATATTCCAATTCATGTTGACTAA
TAAAGAAAAGAGAAATTAAG

Downstream 100 bases:

>100_bases
AACTATTTTAGCGCTTCATAATCAAATTAAAAAACGTGAAGTTAAAATTTATGATTTGATTAAAAAATCGATTGATCATG
ATTTAAAGATTAAAAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSYNLQKLMSSCMFILTDDEIKQVENRLNNLFNEIKVFELFNLQNITPFEIINKSFDNFLREDEINSCVGNNSEEVLNNC
LKVIDHYGVLKNEK

Sequences:

>Translated_94_residues
MSYNLQKLMSSCMFILTDDEIKQVENRLNNLFNEIKVFELFNLQNITPFEIINKSFDNFLREDEINSCVGNNSEEVLNNC
LKVIDHYGVLKNEK
>Mature_93_residues
SYNLQKLMSSCMFILTDDEIKQVENRLNNLFNEIKVFELFNLQNITPFEIINKSFDNFLREDEINSCVGNNSEEVLNNCL
KVIDHYGVLKNEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11068; Mature: 10937

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYNLQKLMSSCMFILTDDEIKQVENRLNNLFNEIKVFELFNLQNITPFEIINKSFDNFL
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
REDEINSCVGNNSEEVLNNCLKVIDHYGVLKNEK
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SYNLQKLMSSCMFILTDDEIKQVENRLNNLFNEIKVFELFNLQNITPFEIINKSFDNFL
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
REDEINSCVGNNSEEVLNNCLKVIDHYGVLKNEK
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA