Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358067

GI number: 13358067

Start: 621853

End: 623016

Strand: Direct

Name: Not Available

Synonym: UU504

Alternate gene names: NA

Gene position: 621853-623016 (Clockwise)

Preceding gene: 13358062

Following gene: 13358068

Centisome position: 82.72

GC content: 20.79

Gene sequence:

>1164_bases
ATGAAAAAGAAGGTGATAAAAATGATCAATAATTCACCAAACATTAATTATTATTTACAAGATAAAAAATATATTCCAAA
ATATGCTTACTATGTTAATAAAAAACAAAAACCTATCGAGCTATTTGCACGATATAAAGGACGTCCTGCTCTTTTTATTC
GTGAAAATACCATGATTAATACTTCATTAAATTCAAATGTATTAAATTTAGACTTTGAATTTGAAGTTGCAGGAGATTTT
AAATTACCTATTAATTACTTTTTTATGGATATAAAAAGTGATATAGGTGAATTTCGTAATTTAGAAGTTTATGAAACTAA
ACACTCTTTGTATGAAATCGGAGGAGTGATTTATGACTTATACACTTATAAAACCAATTTAAAAATTAATCTTAATCAAG
CTGGTTTTGTTAATAAGAACACTTTAAGTAAAAAAATTAATTTTGCTTTTTTTCTTCGTATTAATGATGATAAACGAATT
CATGAACAAATTAATTATACATGTGAAAAAAGTTTGTTTTTTGAGGCAGTACAAAAAGAATTTCAAGATCTTAATTTTGA
TTATTTTTACAAAAATACATTTTTATTAAATAAACACGAAAAAGTTAATCCTACTAATTTTTGAGAAACAATTCCATTAT
TTTGAATTCAAGATAAAGAACTTGATAATGAAATAAAAATCAAAAATAATAAGCGTTATATATTTAATACAAAATTTAGT
TTAAATGATGATAATTCATGAAATAATCGTCCTACGAAAGAAACGTTTGAATTGATTAAATACTCCTTAGAATACGTAAA
TTTAGCTAAAGAAAATAAAAAAATTGAATGAATTGAAGATTATCAAAATATTAATATTACATATGATTATTACCAAAGAC
CTATTGATTTTTTATTAAAAATGAAAACAAAATTCTTGTATGATTTTAAAAACGATCAATTATCTATTAATAATAATTAT
GGTTTTAATGGTATTTGATTACCAAATAAACAAATAGCAAAATTAAAAATTACAGTTATTAATAATTATCTAACACCACA
AAAATTTGTAATTAATCAATTAATTAACATCGAAAATGATTTTAATTCTATCAATAAACAAAAAATTAGTGTACAGAAAG
CAATAATTGAAAATTATGAAAATTTTAAATCACTTGAAAATTAA

Upstream 100 bases:

>100_bases
GATGTTTGAGATGAAAAACAATACTTAAAAACTGAGGTAATTAAAGATTTGCAATTTATTAATAAATGAAACATTAATAA
AATTAAAAACTTACATTCTA

Downstream 100 bases:

>100_bases
TTGGCGTAGTCATAAAATAAAGGTGATTGTTGGTGGAATTATTAGTTTATTAATTGTAATTACTGCTATTATTTTAGGTG
TTATTCTATCAACTCAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMINTSLNSNVLNLDFEFEVAGDF
KLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDLYTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRI
HEQINYTCEKSLFFEAVQKEFQDLNFDYFYKNTFLLNKHEKVNPTNFWETIPLFWIQDKELDNEIKIKNNKRYIFNTKFS
LNDDNSWNNRPTKETFELIKYSLEYVNLAKENKKIEWIEDYQNINITYDYYQRPIDFLLKMKTKFLYDFKNDQLSINNNY
GFNGIWLPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSINKQKISVQKAIIENYENFKSLEN

Sequences:

>Translated_387_residues
MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMINTSLNSNVLNLDFEFEVAGDF
KLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDLYTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRI
HEQINYTCEKSLFFEAVQKEFQDLNFDYFYKNTFLLNKHEKVNPTNF*ETIPLF*IQDKELDNEIKIKNNKRYIFNTKFS
LNDDNS*NNRPTKETFELIKYSLEYVNLAKENKKIE*IEDYQNINITYDYYQRPIDFLLKMKTKFLYDFKNDQLSINNNY
GFNGI*LPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSINKQKISVQKAIIENYENFKSLEN
>Mature_387_residues
MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMINTSLNSNVLNLDFEFEVAGDF
KLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDLYTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRI
HEQINYTCEKSLFFEAVQKEFQDLNFDYFYKNTFLLNKHEKVNPTNF*ETIPLF*IQDKELDNEIKIKNNKRYIFNTKFS
LNDDNS*NNRPTKETFELIKYSLEYVNLAKENKKIE*IEDYQNINITYDYYQRPIDFLLKMKTKFLYDFKNDQLSINNNY
GFNGI*LPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSINKQKISVQKAIIENYENFKSLEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45701; Mature: 45701

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMIN
CCCHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCEEEE
TSLNSNVLNLDFEFEVAGDFKLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDL
ECCCCCEEEEEEEEEEECCEECCCEEEEEEHHHHHHHHCCEEEEEHHHHHHHHCCEEEEE
YTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRIHEQINYTCEKSLFFEAVQKE
EEEEEEEEEEECCCCCCCCCHHHCEEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHH
FQDLNFDYFYKNTFLLNKHEKVNPTNFETIPLFIQDKELDNEIKIKNNKRYIFNTKFSLN
HHHCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEC
DDNSNNRPTKETFELIKYSLEYVNLAKENKKIEIEDYQNINITYDYYQRPIDFLLKMKTK
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHCHHHHHHHHHHH
FLYDFKNDQLSINNNYGFNGILPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSIN
HEEEECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHH
KQKISVQKAIIENYENFKSLEN
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMIN
CCCHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCEEEE
TSLNSNVLNLDFEFEVAGDFKLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDL
ECCCCCEEEEEEEEEEECCEECCCEEEEEEHHHHHHHHCCEEEEEHHHHHHHHCCEEEEE
YTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRIHEQINYTCEKSLFFEAVQKE
EEEEEEEEEEECCCCCCCCCHHHCEEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHH
FQDLNFDYFYKNTFLLNKHEKVNPTNFETIPLFIQDKELDNEIKIKNNKRYIFNTKFSLN
HHHCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEC
DDNSNNRPTKETFELIKYSLEYVNLAKENKKIEIEDYQNINITYDYYQRPIDFLLKMKTK
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHCHHHHHHHHHHH
FLYDFKNDQLSINNNYGFNGILPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSIN
HEEEECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHH
KQKISVQKAIIENYENFKSLEN
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA