| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13358067
GI number: 13358067
Start: 621853
End: 623016
Strand: Direct
Name: Not Available
Synonym: UU504
Alternate gene names: NA
Gene position: 621853-623016 (Clockwise)
Preceding gene: 13358062
Following gene: 13358068
Centisome position: 82.72
GC content: 20.79
Gene sequence:
>1164_bases ATGAAAAAGAAGGTGATAAAAATGATCAATAATTCACCAAACATTAATTATTATTTACAAGATAAAAAATATATTCCAAA ATATGCTTACTATGTTAATAAAAAACAAAAACCTATCGAGCTATTTGCACGATATAAAGGACGTCCTGCTCTTTTTATTC GTGAAAATACCATGATTAATACTTCATTAAATTCAAATGTATTAAATTTAGACTTTGAATTTGAAGTTGCAGGAGATTTT AAATTACCTATTAATTACTTTTTTATGGATATAAAAAGTGATATAGGTGAATTTCGTAATTTAGAAGTTTATGAAACTAA ACACTCTTTGTATGAAATCGGAGGAGTGATTTATGACTTATACACTTATAAAACCAATTTAAAAATTAATCTTAATCAAG CTGGTTTTGTTAATAAGAACACTTTAAGTAAAAAAATTAATTTTGCTTTTTTTCTTCGTATTAATGATGATAAACGAATT CATGAACAAATTAATTATACATGTGAAAAAAGTTTGTTTTTTGAGGCAGTACAAAAAGAATTTCAAGATCTTAATTTTGA TTATTTTTACAAAAATACATTTTTATTAAATAAACACGAAAAAGTTAATCCTACTAATTTTTGAGAAACAATTCCATTAT TTTGAATTCAAGATAAAGAACTTGATAATGAAATAAAAATCAAAAATAATAAGCGTTATATATTTAATACAAAATTTAGT TTAAATGATGATAATTCATGAAATAATCGTCCTACGAAAGAAACGTTTGAATTGATTAAATACTCCTTAGAATACGTAAA TTTAGCTAAAGAAAATAAAAAAATTGAATGAATTGAAGATTATCAAAATATTAATATTACATATGATTATTACCAAAGAC CTATTGATTTTTTATTAAAAATGAAAACAAAATTCTTGTATGATTTTAAAAACGATCAATTATCTATTAATAATAATTAT GGTTTTAATGGTATTTGATTACCAAATAAACAAATAGCAAAATTAAAAATTACAGTTATTAATAATTATCTAACACCACA AAAATTTGTAATTAATCAATTAATTAACATCGAAAATGATTTTAATTCTATCAATAAACAAAAAATTAGTGTACAGAAAG CAATAATTGAAAATTATGAAAATTTTAAATCACTTGAAAATTAA
Upstream 100 bases:
>100_bases GATGTTTGAGATGAAAAACAATACTTAAAAACTGAGGTAATTAAAGATTTGCAATTTATTAATAAATGAAACATTAATAA AATTAAAAACTTACATTCTA
Downstream 100 bases:
>100_bases TTGGCGTAGTCATAAAATAAAGGTGATTGTTGGTGGAATTATTAGTTTATTAATTGTAATTACTGCTATTATTTTAGGTG TTATTCTATCAACTCAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMINTSLNSNVLNLDFEFEVAGDF KLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDLYTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRI HEQINYTCEKSLFFEAVQKEFQDLNFDYFYKNTFLLNKHEKVNPTNFWETIPLFWIQDKELDNEIKIKNNKRYIFNTKFS LNDDNSWNNRPTKETFELIKYSLEYVNLAKENKKIEWIEDYQNINITYDYYQRPIDFLLKMKTKFLYDFKNDQLSINNNY GFNGIWLPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSINKQKISVQKAIIENYENFKSLEN
Sequences:
>Translated_387_residues MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMINTSLNSNVLNLDFEFEVAGDF KLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDLYTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRI HEQINYTCEKSLFFEAVQKEFQDLNFDYFYKNTFLLNKHEKVNPTNF*ETIPLF*IQDKELDNEIKIKNNKRYIFNTKFS LNDDNS*NNRPTKETFELIKYSLEYVNLAKENKKIE*IEDYQNINITYDYYQRPIDFLLKMKTKFLYDFKNDQLSINNNY GFNGI*LPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSINKQKISVQKAIIENYENFKSLEN >Mature_387_residues MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMINTSLNSNVLNLDFEFEVAGDF KLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDLYTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRI HEQINYTCEKSLFFEAVQKEFQDLNFDYFYKNTFLLNKHEKVNPTNF*ETIPLF*IQDKELDNEIKIKNNKRYIFNTKFS LNDDNS*NNRPTKETFELIKYSLEYVNLAKENKKIE*IEDYQNINITYDYYQRPIDFLLKMKTKFLYDFKNDQLSINNNY GFNGI*LPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSINKQKISVQKAIIENYENFKSLEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45701; Mature: 45701
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMIN CCCHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCEEEE TSLNSNVLNLDFEFEVAGDFKLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDL ECCCCCEEEEEEEEEEECCEECCCEEEEEEHHHHHHHHCCEEEEEHHHHHHHHCCEEEEE YTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRIHEQINYTCEKSLFFEAVQKE EEEEEEEEEEECCCCCCCCCHHHCEEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHH FQDLNFDYFYKNTFLLNKHEKVNPTNFETIPLFIQDKELDNEIKIKNNKRYIFNTKFSLN HHHCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEC DDNSNNRPTKETFELIKYSLEYVNLAKENKKIEIEDYQNINITYDYYQRPIDFLLKMKTK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHCHHHHHHHHHHH FLYDFKNDQLSINNNYGFNGILPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSIN HEEEECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHH KQKISVQKAIIENYENFKSLEN HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKKVIKMINNSPNINYYLQDKKYIPKYAYYVNKKQKPIELFARYKGRPALFIRENTMIN CCCHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEEECCEEEE TSLNSNVLNLDFEFEVAGDFKLPINYFFMDIKSDIGEFRNLEVYETKHSLYEIGGVIYDL ECCCCCEEEEEEEEEEECCEECCCEEEEEEHHHHHHHHCCEEEEEHHHHHHHHCCEEEEE YTYKTNLKINLNQAGFVNKNTLSKKINFAFFLRINDDKRIHEQINYTCEKSLFFEAVQKE EEEEEEEEEEECCCCCCCCCHHHCEEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHH FQDLNFDYFYKNTFLLNKHEKVNPTNFETIPLFIQDKELDNEIKIKNNKRYIFNTKFSLN HHHCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEC DDNSNNRPTKETFELIKYSLEYVNLAKENKKIEIEDYQNINITYDYYQRPIDFLLKMKTK CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEHHHHCHHHHHHHHHHH FLYDFKNDQLSINNNYGFNGILPNKQIAKLKITVINNYLTPQKFVINQLINIENDFNSIN HEEEECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHH KQKISVQKAIIENYENFKSLEN HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA