| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13358068
GI number: 13358068
Start: 622988
End: 623848
Strand: Direct
Name: Not Available
Synonym: UU505
Alternate gene names: NA
Gene position: 622988-623848 (Clockwise)
Preceding gene: 13358067
Following gene: 13358069
Centisome position: 82.88
GC content: 18.35
Gene sequence:
>861_bases ATGAAAATTTTAAATCACTTGAAAATTAATTGGCGTAGTCATAAAATAAAGGTGATTGTTGGTGGAATTATTAGTTTATT AATTGTAATTACTGCTATTATTTTAGGTGTTATTCTATCAACTCAAAATACAAATAAAATTAGTAAAAAAGAACCCTTAA CTCAAATTGAAGATAATATTAATAATAAAAAACAAGATGCACATAAGGTTAATGAAAATATAACAATTATTGATAAAAAA GGTGGTATAATCCATAAAAAGACAGACATTACAAAAATTAACCAAATAAATCAACAAAAAGAAATTTTAAAGGATTATTT AAAAAATAAAGAAGAAAAAAATAAGGATCAAATAAATAATACTAACGAAAATCTAAATAAACCAATAATTAATGTTAAAA ATGTAGATGATAAAAACAAACAAGAAAATTCAACTAAATTAAAAAATAATGATTTTATTTCTAATAATGATAAAAACAAT AAAATCAACGAAAATAATAATATAAGTTATGAAGAAAAACCTTTTAAACTAAAACGCTTCAATATTATTAATGTAATTGC GAAAAATAAAGATTTATACCAATTATTAGATTTCAAAACTTATTTTTCTAATGAAAACATTAATAATGATATTAAATTTA ATGAAAAGTTGTTTATTAAAAATATCTATGAAATAGTCAAATCTGCTATAAGTAGTTTTCAAGAATTTTGTAATATCATG CAGTATATTAAAATTGATATCAAATATAAATTTAATAAAGATGCAAAAAACATAATTGTTATTGCTAATTGATTATTCGA TAATTATAATATTAAAAATGAAACAAGATATTATGAAGAGTTTGTTTTAAGTATTAATTAA
Upstream 100 bases:
>100_bases CCACAAAAATTTGTAATTAATCAATTAATTAACATCGAAAATGATTTTAATTCTATCAATAAACAAAAAATTAGTGTACA GAAAGCAATAATTGAAAATT
Downstream 100 bases:
>100_bases AAGAAAGATTAATTATATGTCTATTAATATTAAAGATTTAATCATGAAAATCGCTAAGGAAAATAAAATTGCTTTAAATA TGGATAATTTAAATATCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKILNHLKINWRSHKIKVIVGGIISLLIVITAIILGVILSTQNTNKISKKEPLTQIEDNINNKKQDAHKVNENITIIDKK GGIIHKKTDITKINQINQQKEILKDYLKNKEEKNKDQINNTNENLNKPIINVKNVDDKNKQENSTKLKNNDFISNNDKNN KINENNNISYEEKPFKLKRFNIINVIAKNKDLYQLLDFKTYFSNENINNDIKFNEKLFIKNIYEIVKSAISSFQEFCNIM QYIKIDIKYKFNKDAKNIIVIANWLFDNYNIKNETRYYEEFVLSIN
Sequences:
>Translated_286_residues MKILNHLKINWRSHKIKVIVGGIISLLIVITAIILGVILSTQNTNKISKKEPLTQIEDNINNKKQDAHKVNENITIIDKK GGIIHKKTDITKINQINQQKEILKDYLKNKEEKNKDQINNTNENLNKPIINVKNVDDKNKQENSTKLKNNDFISNNDKNN KINENNNISYEEKPFKLKRFNIINVIAKNKDLYQLLDFKTYFSNENINNDIKFNEKLFIKNIYEIVKSAISSFQEFCNIM QYIKIDIKYKFNKDAKNIIVIAN*LFDNYNIKNETRYYEEFVLSIN >Mature_286_residues MKILNHLKINWRSHKIKVIVGGIISLLIVITAIILGVILSTQNTNKISKKEPLTQIEDNINNKKQDAHKVNENITIIDKK GGIIHKKTDITKINQINQQKEILKDYLKNKEEKNKDQINNTNENLNKPIINVKNVDDKNKQENSTKLKNNDFISNNDKNN KINENNNISYEEKPFKLKRFNIINVIAKNKDLYQLLDFKTYFSNENINNDIKFNEKLFIKNIYEIVKSAISSFQEFCNIM QYIKIDIKYKFNKDAKNIIVIAN*LFDNYNIKNETRYYEEFVLSIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33507; Mature: 33507
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILNHLKINWRSHKIKVIVGGIISLLIVITAIILGVILSTQNTNKISKKEPLTQIEDNI CCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCC NNKKQDAHKVNENITIIDKKGGIIHKKTDITKINQINQQKEILKDYLKNKEEKNKDQINN CCHHHHHHHHCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHCCC TNENLNKPIINVKNVDDKNKQENSTKLKNNDFISNNDKNNKINENNNISYEEKPFKLKRF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHE NIINVIAKNKDLYQLLDFKTYFSNENINNDIKFNEKLFIKNIYEIVKSAISSFQEFCNIM EEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QYIKIDIKYKFNKDAKNIIVIANLFDNYNIKNETRYYEEFVLSIN HHHEEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHEECC >Mature Secondary Structure MKILNHLKINWRSHKIKVIVGGIISLLIVITAIILGVILSTQNTNKISKKEPLTQIEDNI CCCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCC NNKKQDAHKVNENITIIDKKGGIIHKKTDITKINQINQQKEILKDYLKNKEEKNKDQINN CCHHHHHHHHCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHHCCC TNENLNKPIINVKNVDDKNKQENSTKLKNNDFISNNDKNNKINENNNISYEEKPFKLKRF CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHE NIINVIAKNKDLYQLLDFKTYFSNENINNDIKFNEKLFIKNIYEIVKSAISSFQEFCNIM EEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QYIKIDIKYKFNKDAKNIIVIANLFDNYNIKNETRYYEEFVLSIN HHHEEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA