| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358005
GI number: 13358005
Start: 503066
End: 504316
Strand: Reverse
Name: Not Available
Synonym: UU442
Alternate gene names: NA
Gene position: 504316-503066 (Counterclockwise)
Preceding gene: 13358006
Following gene: 13358004
Centisome position: 67.09
GC content: 22.78
Gene sequence:
>1251_bases ATGAAATTTAAAAAGAAAGCAATATTATTGTCGACAATAAGTTTAAGTTCGATGGTTTTAGGATCGTTTAGTTTGTTAGC AAAAAATAAAAGTCAACAAACAATTAGTTCGAAACTAAACCAACAAGTTAATTTGGTTGACAATCAAAATCAAAACAAAA TTAGTTATAGTGTTATTGAAATTGATGAAAGCAATAAAGATTATTTTAAAGATAAATTAATTATTCGTTTGATTTTTAAT ACAACAAAAGCTTCAAAAACAGAAATTTTTGAGCAACATTTAAAAATTAAAACTTGAATTAAAAATGCAAAAATATCAGG TGTAGATCAATATAATGAATTTGATTATTTACCTTTTATGGATTTAATTATTTTTAATAATAAATTGGACTTAAAACAAC TTGAATCATTATCAAATAGTGATTTTATTAATCAAGTAATTATTAATAAAATTAAATTTATTTTATTTAATAAAAAGATT GATCAAAAACCAATGGCTGTATTTGGTGAGTGTAAAAATTTAGTTTTAAAAAATGAATGAGGATTTGATCAAGATGTTGG AGAATTTTGTCAAATCGATTCAAGTAGTGGAACAAGTTTTGAACCAGTTTATTCAAAAGATTTGCTTGAATTAAGAGAAG AATTTATTGAAAATGTAGAAGATCGTTTAAGTGATGAGTTTTTTGCAGATTTTTATGATAATACTAATTTATTTGAACAA ACTCCAACGCCCAATGATCATTTATTAATTAAAACCAATCCTATAAAAGATGATTTTGAAAGTTTGTTATCAAAAAAATC TGGATTACAGTATAAAATAATGCGATTAGTGTATCAACATGAACATGGTAAAGTAATTAAAACATTACCTGTTAATGCCC TAACATTCTTAAATCATGAAGATTTAAAATTTGAAGAATTGTATTCAGGGAATTATCGATTTACTGGTATTGAGTATTGA GATAAAGAAAATAAAATTTGAGTTTTTGAGGAATTAATCAATCATAATGAACAATATTATCAAATGCAAGTAGTTTTTAA TAACAACATTACTGTTCATGATTTAATTTCAAAAGTTTATTTTGATGCTCATTTTAATAAACCACAAGAAGAAAGTACTT CACAAAGTTTAACTTTATCATTAAATCCTAATTTTAATAATATAAATAAAGATGAATCAATTGAAATAAAGTTAATGAAT TTAAATGATCGTGAAAATTGAGAAAGTCCATCTTTATTCACTAGATATTAA
Upstream 100 bases:
>100_bases ATTTGAATTTCACTAAATTGAGAAAAGTATTAGTTTTATTTGACTAATACTTTTTTTAACACCTATTTTAAAAATTTAAT AATTTTAAGGATAAAATAAT
Downstream 100 bases:
>100_bases TGCAAAGGATGAAACATCAGAAAATAGTCATATTAAAATTTGAAAAGAGTTAGATTGATTAATACAAAATGACGTAAAAA TTATTAACCATAGTTATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKFKKKAILLSTISLSSMVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRLIFN TTKASKTEIFEQHLKIKTWIKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKI DQKPMAVFGECKNLVLKNEWGFDQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQ TPTPNDHLLIKTNPIKDDFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEYW DKENKIWVFEELINHNEQYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMN LNDRENWESPSLFTRY
Sequences:
>Translated_416_residues MKFKKKAILLSTISLSSMVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRLIFN TTKASKTEIFEQHLKIKT*IKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKI DQKPMAVFGECKNLVLKNE*GFDQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQ TPTPNDHLLIKTNPIKDDFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEY* DKENKI*VFEELINHNEQYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMN LNDREN*ESPSLFTRY >Mature_416_residues MKFKKKAILLSTISLSSMVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIEIDESNKDYFKDKLIIRLIFN TTKASKTEIFEQHLKIKT*IKNAKISGVDQYNEFDYLPFMDLIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKI DQKPMAVFGECKNLVLKNE*GFDQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQ TPTPNDHLLIKTNPIKDDFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDLKFEELYSGNYRFTGIEY* DKENKI*VFEELINHNEQYYQMQVVFNNNITVHDLISKVYFDAHFNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMN LNDREN*ESPSLFTRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47900; Mature: 47900
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKKKAILLSTISLSSMVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIE CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCEEEEEEEE IDESNKDYFKDKLIIRLIFNTTKASKTEIFEQHLKIKTIKNAKISGVDQYNEFDYLPFMD EECCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEE LIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKIDQKPMAVFGECKNLVLKNEGF EEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHEECCCCC DQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQTP CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC TPNDHLLIKTNPIKDDFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDL CCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCC KFEELYSGNYRFTGIEYDKENKIVFEELINHNEQYYQMQVVFNNNITVHDLISKVYFDAH CHHHHHCCCEEEEEEEECCCCCCHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHC FNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMNLNDRENESPSLFTRY CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECC >Mature Secondary Structure MKFKKKAILLSTISLSSMVLGSFSLLAKNKSQQTISSKLNQQVNLVDNQNQNKISYSVIE CCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCEEEEEEEE IDESNKDYFKDKLIIRLIFNTTKASKTEIFEQHLKIKTIKNAKISGVDQYNEFDYLPFMD EECCCCHHHHHHEEEEEEECCCCCHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEE LIIFNNKLDLKQLESLSNSDFINQVIINKIKFILFNKKIDQKPMAVFGECKNLVLKNEGF EEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHEECCCCC DQDVGEFCQIDSSSGTSFEPVYSKDLLELREEFIENVEDRLSDEFFADFYDNTNLFEQTP CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC TPNDHLLIKTNPIKDDFESLLSKKSGLQYKIMRLVYQHEHGKVIKTLPVNALTFLNHEDL CCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCC KFEELYSGNYRFTGIEYDKENKIVFEELINHNEQYYQMQVVFNNNITVHDLISKVYFDAH CHHHHHCCCEEEEEEEECCCCCCHHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHC FNKPQEESTSQSLTLSLNPNFNNINKDESIEIKLMNLNDRENESPSLFTRY CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA