| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13358004
GI number: 13358004
Start: 501760
End: 503112
Strand: Reverse
Name: Not Available
Synonym: UU441
Alternate gene names: NA
Gene position: 503112-501760 (Counterclockwise)
Preceding gene: 13358005
Following gene: 13358003
Centisome position: 66.93
GC content: 22.25
Gene sequence:
>1353_bases ATGATCGTGAAAATTGAGAAAGTCCATCTTTATTCACTAGATATTAATGCAAAGGATGAAACATCAGAAAATAGTCATAT TAAAATTTGAAAAGAGTTAGATTGATTAATACAAAATGACGTAAAAATTATTAACCATAGTTATGGATGAAGTCCAAATG ATTTTTTAAATATTGGTTTTTATAATTTTATTAATGGTAAAGAAATAAACGATGATAAAGATTTTAAAAGAGAGTTAAAA AAATATATAGATACATTGAATAAGGATGATATTGTTAATAATACTATTAATAAATATAAATTTAAAAATTATATTTATGA TTTCATATCATATTATTTTGATATTATAAATATTTTTTCAGCTGGAAATTCTTATAATGATGAAATACGATATAGAAATA AAAATGGACATATTTTAGAAATTAATTGATTTGATATATCTAAATATAGTTTTATGGATAGATTTAATCAAAATTCAATA TATGTAGGATCTACTAATAAAAATAATGAAAAAGTAAGTAATTTTTCAGATCGACATCACTTGAATGATGTTAAAAATAA ATATGGAGATTTATTGATGCCATTTTTAGTTGCTCCTGGAGAAGGTATTTATGACACTTCAATAATTACAAAGTTTATTA AAAATAAAGGAGATAAAAATATAAATCTAGGTACTAGTTTTTCTGCGCCTATTGTCACTGGTGCGATTAGTTTATTGCAA TCTTATTATATGGTTAATAACGCTAATAAAACAATTCCACTAACACATATTCGCTCAATTTTAGCTGCTTCATCAATTCC TTTAAAAAATAATGAAAATTATGATTTTTATAAAAATAGTTTTAGTCATTTATATGGTGCTGGTCATTTAGATTTTAAAA GAGCAATAGAAGCATATAAAAACGCAAAACAAACAAAAATTTTAACGAAACACAAAGATAAACAACTAGTTAAAGAAATG GATATAAGTATTGATAATGATCAAACTAATTTCAATTTTGCTTTATCATGATTATTTAAGCCAACATCAAATAGTTTTTC AAAAAAACATGATTATAATAGTGTATACAACGAATATAAAAAACTAACATATTTTAAAAATGACAATTATGATATCTATT TAGTTAAAAATGAAGATCTAAAAAATATTGATTATCAAAATTTTGATAACTTTGGCGAAATTTTAAGAACTATAAACATT TATCGTTCAGAATCAGATTCGAATGTTGAATTAATTAGAGCACCAAATCTAAATAAAGGCGAATACAAAATTTTAGTTTA TCAAAAAGGAGAAGTAAGAAATGAACAAACGTCATTTAGTTACACATTCATTAAAGAAAAAGCTATTCATTAA
Upstream 100 bases:
>100_bases CAAGAAGAAAGTACTTCACAAAGTTTAACTTTATCATTAAATCCTAATTTTAATAATATAAATAAAGATGAATCAATTGA AATAAAGTTAATGAATTTAA
Downstream 100 bases:
>100_bases AACTAGCTTATTATCATTATTTTTAATTGCACCTTTGATTATTGGTTGTACAACTAATAAATCAAAATCCAATAATTCTA ATAAATTGTCAAAGCAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MIVKIEKVHLYSLDINAKDETSENSHIKIWKELDWLIQNDVKIINHSYGWSPNDFLNIGFYNFINGKEINDDKDFKRELK KYIDTLNKDDIVNNTINKYKFKNYIYDFISYYFDIINIFSAGNSYNDEIRYRNKNGHILEINWFDISKYSFMDRFNQNSI YVGSTNKNNEKVSNFSDRHHLNDVKNKYGDLLMPFLVAPGEGIYDTSIITKFIKNKGDKNINLGTSFSAPIVTGAISLLQ SYYMVNNANKTIPLTHIRSILAASSIPLKNNENYDFYKNSFSHLYGAGHLDFKRAIEAYKNAKQTKILTKHKDKQLVKEM DISIDNDQTNFNFALSWLFKPTSNSFSKKHDYNSVYNEYKKLTYFKNDNYDIYLVKNEDLKNIDYQNFDNFGEILRTINI YRSESDSNVELIRAPNLNKGEYKILVYQKGEVRNEQTSFSYTFIKEKAIH
Sequences:
>Translated_450_residues MIVKIEKVHLYSLDINAKDETSENSHIKI*KELD*LIQNDVKIINHSYG*SPNDFLNIGFYNFINGKEINDDKDFKRELK KYIDTLNKDDIVNNTINKYKFKNYIYDFISYYFDIINIFSAGNSYNDEIRYRNKNGHILEIN*FDISKYSFMDRFNQNSI YVGSTNKNNEKVSNFSDRHHLNDVKNKYGDLLMPFLVAPGEGIYDTSIITKFIKNKGDKNINLGTSFSAPIVTGAISLLQ SYYMVNNANKTIPLTHIRSILAASSIPLKNNENYDFYKNSFSHLYGAGHLDFKRAIEAYKNAKQTKILTKHKDKQLVKEM DISIDNDQTNFNFALS*LFKPTSNSFSKKHDYNSVYNEYKKLTYFKNDNYDIYLVKNEDLKNIDYQNFDNFGEILRTINI YRSESDSNVELIRAPNLNKGEYKILVYQKGEVRNEQTSFSYTFIKEKAIH >Mature_450_residues MIVKIEKVHLYSLDINAKDETSENSHIKI*KELD*LIQNDVKIINHSYG*SPNDFLNIGFYNFINGKEINDDKDFKRELK KYIDTLNKDDIVNNTINKYKFKNYIYDFISYYFDIINIFSAGNSYNDEIRYRNKNGHILEIN*FDISKYSFMDRFNQNSI YVGSTNKNNEKVSNFSDRHHLNDVKNKYGDLLMPFLVAPGEGIYDTSIITKFIKNKGDKNINLGTSFSAPIVTGAISLLQ SYYMVNNANKTIPLTHIRSILAASSIPLKNNENYDFYKNSFSHLYGAGHLDFKRAIEAYKNAKQTKILTKHKDKQLVKEM DISIDNDQTNFNFALS*LFKPTSNSFSKKHDYNSVYNEYKKLTYFKNDNYDIYLVKNEDLKNIDYQNFDNFGEILRTINI YRSESDSNVELIRAPNLNKGEYKILVYQKGEVRNEQTSFSYTFIKEKAIH
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51927; Mature: 51927
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKIEKVHLYSLDINAKDETSENSHIKIKELDLIQNDVKIINHSYGSPNDFLNIGFYNF CEEEEEEEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHEECCCCCCCCEEEECEEEC INGKEINDDKDFKRELKKYIDTLNKDDIVNNTINKYKFKNYIYDFISYYFDIINIFSAGN CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYNDEIRYRNKNGHILEINFDISKYSFMDRFNQNSIYVGSTNKNNEKVSNFSDRHHLNDV CCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHH KNKYGDLLMPFLVAPGEGIYDTSIITKFIKNKGDKNINLGTSFSAPIVTGAISLLQSYYM HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VNNANKTIPLTHIRSILAASSIPLKNNENYDFYKNSFSHLYGAGHLDFKRAIEAYKNAKQ CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHH TKILTKHKDKQLVKEMDISIDNDQTNFNFALSLFKPTSNSFSKKHDYNSVYNEYKKLTYF HHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEEECCCCCCCHHHCCHHHHHHHHHHEEEE KNDNYDIYLVKNEDLKNIDYQNFDNFGEILRTINIYRSESDSNVELIRAPNLNKGEYKIL ECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEE VYQKGEVRNEQTSFSYTFIKEKAIH EEECCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MIVKIEKVHLYSLDINAKDETSENSHIKIKELDLIQNDVKIINHSYGSPNDFLNIGFYNF CEEEEEEEEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHEECCCCCCCCEEEECEEEC INGKEINDDKDFKRELKKYIDTLNKDDIVNNTINKYKFKNYIYDFISYYFDIINIFSAGN CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYNDEIRYRNKNGHILEINFDISKYSFMDRFNQNSIYVGSTNKNNEKVSNFSDRHHLNDV CCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCEEEEECCCCCCCHHHCCHHHHHHHHH KNKYGDLLMPFLVAPGEGIYDTSIITKFIKNKGDKNINLGTSFSAPIVTGAISLLQSYYM HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VNNANKTIPLTHIRSILAASSIPLKNNENYDFYKNSFSHLYGAGHLDFKRAIEAYKNAKQ CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHH TKILTKHKDKQLVKEMDISIDNDQTNFNFALSLFKPTSNSFSKKHDYNSVYNEYKKLTYF HHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEEECCCCCCCHHHCCHHHHHHHHHHEEEE KNDNYDIYLVKNEDLKNIDYQNFDNFGEILRTINIYRSESDSNVELIRAPNLNKGEYKIL ECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEE VYQKGEVRNEQTSFSYTFIKEKAIH EEECCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA