| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357970
GI number: 13357970
Start: 469722
End: 470171
Strand: Reverse
Name: Not Available
Synonym: UU408
Alternate gene names: NA
Gene position: 470171-469722 (Counterclockwise)
Preceding gene: 13357971
Following gene: 13357969
Centisome position: 62.55
GC content: 22.22
Gene sequence:
>450_bases ATGTCAAAAATTGTCGATAACATTGATATCAATGCATTAAGAATTAATCATTATGAAGAATGAGAACAAAATCATATTAT TAAGGTAATTAATGCTTATCGTCATCATGAATCAAAAAAAGAAAAATTTAAAATGATTCATGAATTGATTAAAAACCACC AAATGCATTTAACGAAATTAATTCCGTTGTTTGATGTATCAATTTCTGGTTATTATAAATGACTAGAAGACTTAAAAATA GATCAAGTTTGTCCAATTAAAAAAAGAAATATGGATTTAATTGAAAAAATTTGTAAAAGTCATAAGCATTATATTGGTTG TCGTAAAATTCAAAAAATTCTTGAAACACAATATAATGTTAAATTAAATTACAAAACAATTAATTTATATATGAATAAAA TGGATTTATGCAAACCTTGTCATCATGAACATCATGAAAAAAAGGAATAA
Upstream 100 bases:
>100_bases GCAATTTTTATTGTAGGTTATTTAATACGTTATCACTTGCAAAAAATTTACATAAACAAATATAATATAAAGTATAGTCA AGAGAGGAATTATTTTGCTT
Downstream 100 bases:
>100_bases CGTTGTCTATTTTTTCATAATTAATTATGATTATTTTTAGCAATCAGATATGATGATTGCTAATTTTTATTATTTTAGGT TATAATATATCATTGTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSKIVDNIDINALRINHYEEWEQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLIPLFDVSISGYYKWLEDLKI DQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKLNYKTINLYMNKMDLCKPCHHEHHEKKE
Sequences:
>Translated_149_residues MSKIVDNIDINALRINHYEE*EQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLIPLFDVSISGYYK*LEDLKI DQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKLNYKTINLYMNKMDLCKPCHHEHHEKKE >Mature_148_residues SKIVDNIDINALRINHYEE*EQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLIPLFDVSISGYYK*LEDLKID QVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKLNYKTINLYMNKMDLCKPCHHEHHEKKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17781; Mature: 17650
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIVDNIDINALRINHYEEEQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLI CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH PLFDVSISGYYKLEDLKIDQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKL HHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE NYKTINLYMNKMDLCKPCHHEHHEKKE EEEEEEEEECHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKIVDNIDINALRINHYEEEQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLI CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH PLFDVSISGYYKLEDLKIDQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKL HHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE NYKTINLYMNKMDLCKPCHHEHHEKKE EEEEEEEEECHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA