Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357970

GI number: 13357970

Start: 469722

End: 470171

Strand: Reverse

Name: Not Available

Synonym: UU408

Alternate gene names: NA

Gene position: 470171-469722 (Counterclockwise)

Preceding gene: 13357971

Following gene: 13357969

Centisome position: 62.55

GC content: 22.22

Gene sequence:

>450_bases
ATGTCAAAAATTGTCGATAACATTGATATCAATGCATTAAGAATTAATCATTATGAAGAATGAGAACAAAATCATATTAT
TAAGGTAATTAATGCTTATCGTCATCATGAATCAAAAAAAGAAAAATTTAAAATGATTCATGAATTGATTAAAAACCACC
AAATGCATTTAACGAAATTAATTCCGTTGTTTGATGTATCAATTTCTGGTTATTATAAATGACTAGAAGACTTAAAAATA
GATCAAGTTTGTCCAATTAAAAAAAGAAATATGGATTTAATTGAAAAAATTTGTAAAAGTCATAAGCATTATATTGGTTG
TCGTAAAATTCAAAAAATTCTTGAAACACAATATAATGTTAAATTAAATTACAAAACAATTAATTTATATATGAATAAAA
TGGATTTATGCAAACCTTGTCATCATGAACATCATGAAAAAAAGGAATAA

Upstream 100 bases:

>100_bases
GCAATTTTTATTGTAGGTTATTTAATACGTTATCACTTGCAAAAAATTTACATAAACAAATATAATATAAAGTATAGTCA
AGAGAGGAATTATTTTGCTT

Downstream 100 bases:

>100_bases
CGTTGTCTATTTTTTCATAATTAATTATGATTATTTTTAGCAATCAGATATGATGATTGCTAATTTTTATTATTTTAGGT
TATAATATATCATTGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSKIVDNIDINALRINHYEEWEQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLIPLFDVSISGYYKWLEDLKI
DQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKLNYKTINLYMNKMDLCKPCHHEHHEKKE

Sequences:

>Translated_149_residues
MSKIVDNIDINALRINHYEE*EQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLIPLFDVSISGYYK*LEDLKI
DQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKLNYKTINLYMNKMDLCKPCHHEHHEKKE
>Mature_148_residues
SKIVDNIDINALRINHYEE*EQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLIPLFDVSISGYYK*LEDLKID
QVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKLNYKTINLYMNKMDLCKPCHHEHHEKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17781; Mature: 17650

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVDNIDINALRINHYEEEQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLI
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
PLFDVSISGYYKLEDLKIDQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKL
HHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
NYKTINLYMNKMDLCKPCHHEHHEKKE
EEEEEEEEECHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKIVDNIDINALRINHYEEEQNHIIKVINAYRHHESKKEKFKMIHELIKNHQMHLTKLI
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHH
PLFDVSISGYYKLEDLKIDQVCPIKKRNMDLIEKICKSHKHYIGCRKIQKILETQYNVKL
HHHCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
NYKTINLYMNKMDLCKPCHHEHHEKKE
EEEEEEEEECHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA