| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13357971
GI number: 13357971
Start: 470152
End: 471072
Strand: Reverse
Name: Not Available
Synonym: UU409
Alternate gene names: NA
Gene position: 471072-470152 (Counterclockwise)
Preceding gene: 13357975
Following gene: 13357970
Centisome position: 62.67
GC content: 23.24
Gene sequence:
>921_bases TTGTCAGCAAATTATTTTTTAATTGGTTTAACTATTTTTTGCATTACTTGTATTGGTTTAGCTAATTTTCTTATTAAACC AATACAAATTAAAAAACATAATTGGTTAACATGAAATTATTTTATAAACACTAAATGAATTATTAATACTCTAATTAGCA TAAGTTTTTTAATTTATTTTTGTTGTTTGCGATGAGCACCAAATATTCATGTTTTTTTTATTAATCATATTGAAATAATC AATGTTTTAAGGGATAAATTTAGTGATGATATTGATTTATATGAAGCATCTATTACAATTTCACGCACATTTTTATTAGA TTGATGTCCTTGTTTTTCAGTATTAATTTCATGTGTAGCCATTTTTGATAAAAAACAGATTATTATTAATCATTTAGGTT TTTTGTGCTTTTGTTTTGGTTTGTTAACAATTATTGGTGGACTAATTGGTGATGAACCAATTAGATGAAATCGTTTAATA ACTTATATTTTTATAGGGGACAAGCCTAATCCCATTTATTTTAGTTTACACTTTTATTTGTGTCTTTTTGGATTTTATTT ATTTGTAAACACGCGTAAAACCATTAAAATATACTGGATATATATCATCATTCATATTATTCTAATTACTTATATCATTT ATGTTAACGTGATGATATTAATTTTTAATATTAAGAATAACGCTAGTGGTTTTAGTTTTGGTGATTGATATTCTCCAATT TATGCACAATATGGTACCGTAGCACAATTCTTACAATTAAATTACCGATTAAACGCTTTAATTATGTGTTTATTTATGTA TGCAATTTTTATTGTAGGTTATTTAATACGTTATCACTTGCAAAAAATTTACATAAACAAATATAATATAAAGTATAGTC AAGAGAGGAATTATTTTGCTTATGTCAAAAATTGTCGATAA
Upstream 100 bases:
>100_bases AAGACTCGTAATAATGTTGTAATATAATTATTAAAGTTAAACATTAATTTGGTTTAATTAATACTTAGAATTATACTAAA AAATAAGGAGTGCTTGTTAT
Downstream 100 bases:
>100_bases CATTGATATCAATGCATTAAGAATTAATCATTATGAAGAATGAGAACAAAATCATATTATTAAGGTAATTAATGCTTATC GTCATCATGAATCAAAAAAA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLTWNYFINTKWIINTLISISFLIYFCCLRWAPNIHVFFINHIEII NVLRDKFSDDIDLYEASITISRTFLLDWCPCFSVLISCVAIFDKKQIIINHLGFLCFCFGLLTIIGGLIGDEPIRWNRLI TYIFIGDKPNPIYFSLHFYLCLFGFYLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGDWYSPI YAQYGTVAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR
Sequences:
>Translated_306_residues MSANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLT*NYFINTK*IINTLISISFLIYFCCLR*APNIHVFFINHIEII NVLRDKFSDDIDLYEASITISRTFLLD*CPCFSVLISCVAIFDKKQIIINHLGFLCFCFGLLTIIGGLIGDEPIR*NRLI TYIFIGDKPNPIYFSLHFYLCLFGFYLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGD*YSPI YAQYGTVAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR >Mature_305_residues SANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLT*NYFINTK*IINTLISISFLIYFCCLR*APNIHVFFINHIEIIN VLRDKFSDDIDLYEASITISRTFLLD*CPCFSVLISCVAIFDKKQIIINHLGFLCFCFGLLTIIGGLIGDEPIR*NRLIT YIFIGDKPNPIYFSLHFYLCLFGFYLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGD*YSPIY AQYGTVAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35200; Mature: 35068
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLTNYFINTKIINTLISISFLIYFCC CCCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRAPNIHVFFINHIEIINVLRDKFSDDIDLYEASITISRTFLLDCPCFSVLISCVAIFDK HCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEEEECCHHHHHHHHHHHHCC KQIIINHLGFLCFCFGLLTIIGGLIGDEPIRNRLITYIFIGDKPNPIYFSLHFYLCLFGF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCEEEHHHHHHHHHHH YLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGDYSPIYAQYGT HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHH VAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCC >Mature Secondary Structure SANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLTNYFINTKIINTLISISFLIYFCC CCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRAPNIHVFFINHIEIINVLRDKFSDDIDLYEASITISRTFLLDCPCFSVLISCVAIFDK HCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEEEECCHHHHHHHHHHHHCC KQIIINHLGFLCFCFGLLTIIGGLIGDEPIRNRLITYIFIGDKPNPIYFSLHFYLCLFGF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCEEEHHHHHHHHHHH YLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGDYSPIYAQYGT HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHH VAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA