Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357971

GI number: 13357971

Start: 470152

End: 471072

Strand: Reverse

Name: Not Available

Synonym: UU409

Alternate gene names: NA

Gene position: 471072-470152 (Counterclockwise)

Preceding gene: 13357975

Following gene: 13357970

Centisome position: 62.67

GC content: 23.24

Gene sequence:

>921_bases
TTGTCAGCAAATTATTTTTTAATTGGTTTAACTATTTTTTGCATTACTTGTATTGGTTTAGCTAATTTTCTTATTAAACC
AATACAAATTAAAAAACATAATTGGTTAACATGAAATTATTTTATAAACACTAAATGAATTATTAATACTCTAATTAGCA
TAAGTTTTTTAATTTATTTTTGTTGTTTGCGATGAGCACCAAATATTCATGTTTTTTTTATTAATCATATTGAAATAATC
AATGTTTTAAGGGATAAATTTAGTGATGATATTGATTTATATGAAGCATCTATTACAATTTCACGCACATTTTTATTAGA
TTGATGTCCTTGTTTTTCAGTATTAATTTCATGTGTAGCCATTTTTGATAAAAAACAGATTATTATTAATCATTTAGGTT
TTTTGTGCTTTTGTTTTGGTTTGTTAACAATTATTGGTGGACTAATTGGTGATGAACCAATTAGATGAAATCGTTTAATA
ACTTATATTTTTATAGGGGACAAGCCTAATCCCATTTATTTTAGTTTACACTTTTATTTGTGTCTTTTTGGATTTTATTT
ATTTGTAAACACGCGTAAAACCATTAAAATATACTGGATATATATCATCATTCATATTATTCTAATTACTTATATCATTT
ATGTTAACGTGATGATATTAATTTTTAATATTAAGAATAACGCTAGTGGTTTTAGTTTTGGTGATTGATATTCTCCAATT
TATGCACAATATGGTACCGTAGCACAATTCTTACAATTAAATTACCGATTAAACGCTTTAATTATGTGTTTATTTATGTA
TGCAATTTTTATTGTAGGTTATTTAATACGTTATCACTTGCAAAAAATTTACATAAACAAATATAATATAAAGTATAGTC
AAGAGAGGAATTATTTTGCTTATGTCAAAAATTGTCGATAA

Upstream 100 bases:

>100_bases
AAGACTCGTAATAATGTTGTAATATAATTATTAAAGTTAAACATTAATTTGGTTTAATTAATACTTAGAATTATACTAAA
AAATAAGGAGTGCTTGTTAT

Downstream 100 bases:

>100_bases
CATTGATATCAATGCATTAAGAATTAATCATTATGAAGAATGAGAACAAAATCATATTATTAAGGTAATTAATGCTTATC
GTCATCATGAATCAAAAAAA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MSANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLTWNYFINTKWIINTLISISFLIYFCCLRWAPNIHVFFINHIEII
NVLRDKFSDDIDLYEASITISRTFLLDWCPCFSVLISCVAIFDKKQIIINHLGFLCFCFGLLTIIGGLIGDEPIRWNRLI
TYIFIGDKPNPIYFSLHFYLCLFGFYLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGDWYSPI
YAQYGTVAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR

Sequences:

>Translated_306_residues
MSANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLT*NYFINTK*IINTLISISFLIYFCCLR*APNIHVFFINHIEII
NVLRDKFSDDIDLYEASITISRTFLLD*CPCFSVLISCVAIFDKKQIIINHLGFLCFCFGLLTIIGGLIGDEPIR*NRLI
TYIFIGDKPNPIYFSLHFYLCLFGFYLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGD*YSPI
YAQYGTVAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR
>Mature_305_residues
SANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLT*NYFINTK*IINTLISISFLIYFCCLR*APNIHVFFINHIEIIN
VLRDKFSDDIDLYEASITISRTFLLD*CPCFSVLISCVAIFDKKQIIINHLGFLCFCFGLLTIIGGLIGDEPIR*NRLIT
YIFIGDKPNPIYFSLHFYLCLFGFYLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGD*YSPIY
AQYGTVAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35200; Mature: 35068

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLTNYFINTKIINTLISISFLIYFCC
CCCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRAPNIHVFFINHIEIINVLRDKFSDDIDLYEASITISRTFLLDCPCFSVLISCVAIFDK
HCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEEEECCHHHHHHHHHHHHCC
KQIIINHLGFLCFCFGLLTIIGGLIGDEPIRNRLITYIFIGDKPNPIYFSLHFYLCLFGF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCEEEHHHHHHHHHHH
YLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGDYSPIYAQYGT
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHH
VAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
SANYFLIGLTIFCITCIGLANFLIKPIQIKKHNWLTNYFINTKIINTLISISFLIYFCC
CCCEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRAPNIHVFFINHIEIINVLRDKFSDDIDLYEASITISRTFLLDCPCFSVLISCVAIFDK
HCCCCEEEEEEHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEEEECCHHHHHHHHHHHHCC
KQIIINHLGFLCFCFGLLTIIGGLIGDEPIRNRLITYIFIGDKPNPIYFSLHFYLCLFGF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEEECCCCCCEEEHHHHHHHHHHH
YLFVNTRKTIKIYWIYIIIHIILITYIIYVNVMILIFNIKNNASGFSFGDYSPIYAQYGT
HHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHH
VAQFLQLNYRLNALIMCLFMYAIFIVGYLIRYHLQKIYINKYNIKYSQERNYFAYVKNCR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA