Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357964

GI number: 13357964

Start: 463541

End: 464437

Strand: Direct

Name: Not Available

Synonym: UU403

Alternate gene names: NA

Gene position: 463541-464437 (Clockwise)

Preceding gene: 13357959

Following gene: 13357967

Centisome position: 61.66

GC content: 24.75

Gene sequence:

>897_bases
ATGAAAAAAGCAATTTTGATTTCCATTTCTTCATTAATTGGGATTAGTGCGATTGTCGCAACTAGTACTTTTTTGTCATT
ATCAGCCAAAACAAATATTTATGCAAAATTAATAAAATCAAGCGATCTTAATCAAAGTTTAAATTACACTAATTTATCAG
ATGCTAATATTGGAATTAAAGAAATGCTTTTAGGTACTAATAAAATTAATAATGGAAATTATGTTTTATATATTGGAACA
CAATCAAACCTTGATAATTTAAATTTTGTTTATGATAATCAAACTAACCATATTAATTCGATTAGTGATTTAAAATATAA
TGATAATTTGAAGTTTAATGGATCATTAGCAAAATCAATTAATAATGTCAAAAATTATGCAGATAAAGGTGTTTATGAGC
ATGTCCCAGAATTCTATAGTTTTATTGATTTAATGGATACTAATGTTTTTAAACAAAAACAAGATTATGAAAATTTAATT
AAACAAAATAAATCAAGCACTATTAAAGAAGATCAAAATTGAGCTAACAATGCACCAACAGATTATTCTTTTGATGTTAA
TAAAAAGTATAAAGATAAAAGTGGAAGAGAAGTTTATTTTCGTAACGACACTCAAGCTGTTAAATTTCGTGAAATTTTAA
ATTTTTTAAAAAAATATTTATCAAAAGAAAAACTAATTGAATTAAGTACATCACAAACTCCTGGAATTGTTTTGTTTTAT
TCTCAAGACAATCTTAGCAAGGGTCCACAAGTTTATGCTAGTTCAAAAATATATGACAAATCAAAAAATGAACGTAAAGA
ATCATATGTTTCTGGGGACAACGTCTATAATTCATCACGTTTTGAATTTGGTGGAGATTTAAACGCTGCTATTTATAGTG
TCTATGGTAAAAAATAA

Upstream 100 bases:

>100_bases
GAAATCACCATCTTTAATTATTATAATATTATATAATTTTTTAATAGTGAATTCTTGATGCGTGAATTTATTTATAATAT
TAATTTAAGAGGTATATTAA

Downstream 100 bases:

>100_bases
TCAAATATAAAAACTATTGGTCCTTTTTCATACTTAATTACAAGTGTTCATATTTAAAAATATTTTTAATAATTAAAAAT
AAATTCAAAAAAAATAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIKEMLLGTNKINNGNYVLYIGT
QSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSINNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLI
KQNKSSTIKEDQNWANNAPTDYSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFY
SQDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK

Sequences:

>Translated_298_residues
MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIKEMLLGTNKINNGNYVLYIGT
QSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSINNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLI
KQNKSSTIKEDQN*ANNAPTDYSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFY
SQDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK
>Mature_298_residues
MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIKEMLLGTNKINNGNYVLYIGT
QSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSINNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLI
KQNKSSTIKEDQN*ANNAPTDYSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFY
SQDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33647; Mature: 33647

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIK
CCCEEEEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
EMLLGTNKINNGNYVLYIGTQSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSI
HHHHCCCEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHCCEECCCEEECCHHHHHH
NNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLIKQNKSSTIKEDQNANNAPTD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFYS
CEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCEEEEEC
QDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK
CCCCCCCCCEEECCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCC
>Mature Secondary Structure
MKKAILISISSLIGISAIVATSTFLSLSAKTNIYAKLIKSSDLNQSLNYTNLSDANIGIK
CCCEEEEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
EMLLGTNKINNGNYVLYIGTQSNLDNLNFVYDNQTNHINSISDLKYNDNLKFNGSLAKSI
HHHHCCCEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCHHCCEECCCEEECCHHHHHH
NNVKNYADKGVYEHVPEFYSFIDLMDTNVFKQKQDYENLIKQNKSSTIKEDQNANNAPTD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YSFDVNKKYKDKSGREVYFRNDTQAVKFREILNFLKKYLSKEKLIELSTSQTPGIVLFYS
CEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCEEEEEC
QDNLSKGPQVYASSKIYDKSKNERKESYVSGDNVYNSSRFEFGGDLNAAIYSVYGKK
CCCCCCCCCEEECCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA