| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is hmuU-2
Identifier: 13357960
GI number: 13357960
Start: 458667
End: 459713
Strand: Reverse
Name: hmuU-2
Synonym: UU399
Alternate gene names: NA
Gene position: 459713-458667 (Counterclockwise)
Preceding gene: 13357961
Following gene: 13357958
Centisome position: 61.15
GC content: 26.46
Gene sequence:
>1047_bases ATGAAAATGAAATTTAATTTTTTTAAAGATAAACAAAATATATTAGGACAAAATCACATCTTAGAATTAAATAAAAAAAG TTTTATTCCATATCATTTTAAACCTTTGTTAATAACAATAACTTTATTGATTGCTTTATTAGTTGTCATTATTTTAATTT TTTCTGTTACCTTATCTAATAAGTTAGGCTTTAGTGAATTAGCTAAAGTAATATGACAAGAGGTTGTACAATTAATTATT ACTGGAGTTGCTTTAGGTGTAAGTAGTTATGTCTTACAACGCATCACACGAAACCGTTTTGCAGATGTATCAATAATGGG TATTGGGACAATTAATTTAATTTTATTATGTGCTTTAAGTATCCCAGTTGATTTTACAAGTGCAAACGAATTAAGCATCT TACAAAAAAAAGAACCATGAATTTTTATGTTTATGAGTTGTTGTTTAATGGTTTTATATTTCTTTGTTTCACGTCAAAAA GAAAACTTTAATTACAAAAAACTAATTTTAATAGGAGTTATTTTAACATTCTTTTTAATTGCAATTGCACAAAGTATTCG TGGTTGATTAAATTATCACGCTAATGATTATGTTGTTGGCCATATTGTAGGGTCAGTACAAAAAGCACCATTAAATTCAT TAATTATTGCAGCAAGCTTTGTTATTTTAGGCTTATTATGATTATTATTTAACTCATACAAACTAAACATTATTGCTACT AACCAACAAGTAGCAAAACAATTAGGAATAAAAATTAATTTTCAAATTTTTATTGCTCTAATCTTTGTTGGTATAATGGT AGGTGCAAGTTATTCAATATCAGGCGATTTTGTTTATGTTGGTCTATTAGCGGGTAATGCAGCAATGCGTCGTCGTAATA ATAGTTTCACATACGGAATATTAAATTCAGGGATATATGGAATGTTGTCAACATTAATTACTTATTGAATTGGTATTTCA TTGATCGGAATGAGTGTTTATCACGTTGGTGCTATATTACCATTATTAATTGGTCCATATTTCATTTATAAAGTTTTAAG ATCATAA
Upstream 100 bases:
>100_bases ATAATCAATTTGATATTAATTTATTCTCAGCTATCGCTGCCTTACCAGTCTTTGCATATATTTTTGTTTCAAAACAATAC CGTCGGAATGTGGAATAACT
Downstream 100 bases:
>100_bases CATACAAAAGAATATCAAATTATAAAAACCCTTAGATTATTTATGAATCCAAGGGTTTTTATAATGCAACTGTATCTTAA TTATTTGTTTTATTATGAAG
Product: hemin permease
Products: NA
Alternate protein names: Hemin Permease; Iron Compound ABC Transporter Permease Protein; Ferrichrome ABC Transporter Permease; Ferrichrome Transport Permease; Ferric Anguibactin Transport System Permerase Protein
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKMKFNFFKDKQNILGQNHILELNKKSFIPYHFKPLLITITLLIALLVVIILIFSVTLSNKLGFSELAKVIWQEVVQLII TGVALGVSSYVLQRITRNRFADVSIMGIGTINLILLCALSIPVDFTSANELSILQKKEPWIFMFMSCCLMVLYFFVSRQK ENFNYKKLILIGVILTFFLIAIAQSIRGWLNYHANDYVVGHIVGSVQKAPLNSLIIAASFVILGLLWLLFNSYKLNIIAT NQQVAKQLGIKINFQIFIALIFVGIMVGASYSISGDFVYVGLLAGNAAMRRRNNSFTYGILNSGIYGMLSTLITYWIGIS LIGMSVYHVGAILPLLIGPYFIYKVLRS
Sequences:
>Translated_348_residues MKMKFNFFKDKQNILGQNHILELNKKSFIPYHFKPLLITITLLIALLVVIILIFSVTLSNKLGFSELAKVI*QEVVQLII TGVALGVSSYVLQRITRNRFADVSIMGIGTINLILLCALSIPVDFTSANELSILQKKEP*IFMFMSCCLMVLYFFVSRQK ENFNYKKLILIGVILTFFLIAIAQSIRG*LNYHANDYVVGHIVGSVQKAPLNSLIIAASFVILGLL*LLFNSYKLNIIAT NQQVAKQLGIKINFQIFIALIFVGIMVGASYSISGDFVYVGLLAGNAAMRRRNNSFTYGILNSGIYGMLSTLITY*IGIS LIGMSVYHVGAILPLLIGPYFIYKVLRS >Mature_348_residues MKMKFNFFKDKQNILGQNHILELNKKSFIPYHFKPLLITITLLIALLVVIILIFSVTLSNKLGFSELAKVI*QEVVQLII TGVALGVSSYVLQRITRNRFADVSIMGIGTINLILLCALSIPVDFTSANELSILQKKEP*IFMFMSCCLMVLYFFVSRQK ENFNYKKLILIGVILTFFLIAIAQSIRG*LNYHANDYVVGHIVGSVQKAPLNSLIIAASFVILGLL*LLFNSYKLNIIAT NQQVAKQLGIKINFQIFIALIFVGIMVGASYSISGDFVYVGLLAGNAAMRRRNNSFTYGILNSGIYGMLSTLITY*IGIS LIGMSVYHVGAILPLLIGPYFIYKVLRS
Specific function: Unknown
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38070; Mature: 38070
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKFNFFKDKQNILGQNHILELNKKSFIPYHFKPLLITITLLIALLVVIILIFSVTLSN CCCCCCHHHCHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KLGFSELAKVIQEVVQLIITGVALGVSSYVLQRITRNRFADVSIMGIGTINLILLCALSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHC PVDFTSANELSILQKKEPIFMFMSCCLMVLYFFVSRQKENFNYKKLILIGVILTFFLIAI CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AQSIRGLNYHANDYVVGHIVGSVQKAPLNSLIIAASFVILGLLLLFNSYKLNIIATNQQV HHHHCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH AKQLGIKINFQIFIALIFVGIMVGASYSISGDFVYVGLLAGNAAMRRRNNSFTYGILNSG HHHHCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHCCCCCEEEHHHCC IYGMLSTLITYIGISLIGMSVYHVGAILPLLIGPYFIYKVLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKMKFNFFKDKQNILGQNHILELNKKSFIPYHFKPLLITITLLIALLVVIILIFSVTLSN CCCCCCHHHCHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KLGFSELAKVIQEVVQLIITGVALGVSSYVLQRITRNRFADVSIMGIGTINLILLCALSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHC PVDFTSANELSILQKKEPIFMFMSCCLMVLYFFVSRQKENFNYKKLILIGVILTFFLIAI CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH AQSIRGLNYHANDYVVGHIVGSVQKAPLNSLIIAASFVILGLLLLFNSYKLNIIATNQQV HHHHCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH AKQLGIKINFQIFIALIFVGIMVGASYSISGDFVYVGLLAGNAAMRRRNNSFTYGILNSG HHHHCCEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHCCCCCEEEHHHCC IYGMLSTLITYIGISLIGMSVYHVGAILPLLIGPYFIYKVLRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA