Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 13357953

GI number: 13357953

Start: 453792

End: 455576

Strand: Direct

Name: Not Available

Synonym: UU392

Alternate gene names: NA

Gene position: 453792-455576 (Clockwise)

Preceding gene: 13357952

Following gene: 13357959

Centisome position: 60.37

GC content: 21.12

Gene sequence:

>1785_bases
ATGTTAAAAAATTATTTTCAATCAAGTTGATTATATACAACCTTTTTATCACGTTTGGTACTTTTTAAAAAAAGCACATA
TTTTTTAGTAGGAATTAGCTTATTTGTTAATTTAATTTTTATAATTATAAATGGTTTAAATATTGCTAATAATATAAAAA
CGTATTTGATTTTATTTTATCTTTTTACTAGTATTAATTCACTTTTAACAATAGTCTTTAGCACTATTAAAGCTATTAAT
TTATTCAAAGATTTAAAGGATGAAGGAATTGAAATTTTAGTCTTTTCAAAAAGTATTTCACGTAAAAACATTATTTTTAC
TAAAATAGGTTTTTTAATATTAAATATTGTTTTTTGAAGTTTAATAACTTATATTTTAAATATTATTTTTTACGTAGTAA
ATATAAAGAATAATAACGGTATTAATTTTTTTTATTTATATGCTTTTTTTAATTATTATTTCTGTGGATTAATTTTTGCT
AGTATTGCTGCTTTAATTGTTAGTCGTTGATCAAATAAAGTTGCTATGATTATTCCAATTAGTTGTTTTCTCCCCTTTTT
AATTGCTGGTGGTGTTGCTAATTTGTATTCAACATCTAAAATTAATCAAGTAGCCAAATACATGAATATTAATTATGATA
AATATGATAGTAATACAATTTTAGATGTAGAAAAATTTTATTTAAATAATCATAATGATGAAGTTTATTTAATCACTAAA
AATTTAAATAATCCACAATTTAGTAAACGTCAGAATTATTTTTTGAAAGCAGCGTTTGATCACGCAAAAAATGCATCGAC
ATTTTTTCATGTCTTATCTTGATTATCTGTTCCTTATCAATTAAATAATAGTTTTTATAAGAATGATATTGATCCTTTTA
GTGTTAATAGCCAACACGAAAATTATTTAGATAAATATTTTAATTATCATGGTTTAGAATCAAAATTATATGATTATAAA
CTTAACAAACACCCTCATTTACCACAATTTAATATTAATGAAAATCAAAAAGAATATTTTGTTCCTGGAGCTTTAAAAAA
TACGAGTCAATTCCCAACACTTGAGAATCGTAATTTAATTTATGCGAGAGAAAATGTAGATCGTTTTGACGTTAATTTCA
TTGAGGATGATAATTTATTTTCATCAACTAATGATTTTGTTGGTGAATTAAAATGAGCGGTTATTAGAAATACATTAGAA
TCAAAAGTTTTCAATAACTTTGCCAAAAAATTTTATGATAATTTTGATGAAGATATTGATAAACCACAAATTATTGCTGC
TTATAATGATGTAATTAATGAACAATCATCAATAAATTTTTCAACAATCGTTGATGAAAATAGTATTCTATTTGCTAAAA
AGATAAATAATTATTATGTTAAAAATCTTGTTGAAAAGAAAATTTATTTCATTGTAGCTTTAATGTATTATTTATATTTT
AATGAGGAACGTTGAAATCTTTTAGAAAAATTATTAAAAAACGATAAAGTTATTAATTTTTATCGTCCATCATCAATAAG
AATCAATGTAAATAATTATGCATATGATATTGGAGGGATTGGAAGTTATGAATTAATGAAAAAAGTAGTTAATAACAAAA
CTTTATATCGTTACCAACTACAAAAAAGTAATAATTATGTTTTTCAAACAGCAAAAGAAGTTTATTCTATTAAACGTGCT
GATCAAATTGTTAATAAAAATTATTATTGATTAATTTGAATTTTATTTAGTACGATTTTAATTATAAGCTTGGCTTTAAT
TTATTTAAAACGAGATTATAAATAA

Upstream 100 bases:

>100_bases
AAAACCTTTTTTTAGTAATATAAAGTAAAAAAGATTATTTTTATTAATTAGTATTATTCTTATAATTATTATTAAATTTT
TAGAAAGATAGACATTAGCA

Downstream 100 bases:

>100_bases
TTATAATTACTTACTAAAACTTAGTTTATTTAGTTCATATTATTAATTAAACCTACTACAGAAGCAACTATATAAGTTTC
TGTGTATGAAATTGAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MLKNYFQSSWLYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYLFTSINSLLTIVFSTIKAIN
LFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVFWSLITYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFA
SIAALIVSRWSNKVAMIIPISCFLPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITK
NLNNPQFSKRQNYFLKAAFDHAKNASTFFHVLSWLSVPYQLNNSFYKNDIDPFSVNSQHENYLDKYFNYHGLESKLYDYK
LNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARENVDRFDVNFIEDDNLFSSTNDFVGELKWAVIRNTLE
SKVFNNFAKKFYDNFDEDIDKPQIIAAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYF
NEERWNLLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNYVFQTAKEVYSIKRA
DQIVNKNYYWLIWILFSTILIISLALIYLKRDYK

Sequences:

>Translated_594_residues
MLKNYFQSS*LYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYLFTSINSLLTIVFSTIKAIN
LFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVF*SLITYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFA
SIAALIVSR*SNKVAMIIPISCFLPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITK
NLNNPQFSKRQNYFLKAAFDHAKNASTFFHVLS*LSVPYQLNNSFYKNDIDPFSVNSQHENYLDKYFNYHGLESKLYDYK
LNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARENVDRFDVNFIEDDNLFSSTNDFVGELK*AVIRNTLE
SKVFNNFAKKFYDNFDEDIDKPQIIAAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYF
NEER*NLLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNYVFQTAKEVYSIKRA
DQIVNKNYY*LI*ILFSTILIISLALIYLKRDYK
>Mature_594_residues
MLKNYFQSS*LYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYLFTSINSLLTIVFSTIKAIN
LFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVF*SLITYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFA
SIAALIVSR*SNKVAMIIPISCFLPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITK
NLNNPQFSKRQNYFLKAAFDHAKNASTFFHVLS*LSVPYQLNNSFYKNDIDPFSVNSQHENYLDKYFNYHGLESKLYDYK
LNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARENVDRFDVNFIEDDNLFSSTNDFVGELK*AVIRNTLE
SKVFNNFAKKFYDNFDEDIDKPQIIAAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYF
NEER*NLLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNYVFQTAKEVYSIKRA
DQIVNKNYY*LI*ILFSTILIISLALIYLKRDYK

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68612; Mature: 68612

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNYFQSSLYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYL
CCHHHHHHHHHHHHHHHHHHHCCCCHHEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FTSINSLLTIVFSTIKAINLFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVFSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFASIAALIVSRSNKVAMIIPISCF
HHHHHHHEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHH
LPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITKNLN
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEEECCC
NPQFSKRQNYFLKAAFDHAKNASTFFHVLSLSVPYQLNNSFYKNDIDPFSVNSQHENYLD
CCCCHHHHCHHEEEHHHHCCCHHHHHHHHHEECCEEECCCCCCCCCCCCCCCCCHHHHHH
KYFNYHGLESKLYDYKLNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARE
HHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEC
NVDRFDVNFIEDDNLFSSTNDFVGELKAVIRNTLESKVFNNFAKKFYDNFDEDIDKPQII
CCCEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEE
AAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYFNEERN
EHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNY
HHHHHHCCCCEEEEECCCEEEEEECCEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCH
VFQTAKEVYSIKRADQIVNKNYYLIILFSTILIISLALIYLKRDYK
HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKNYFQSSLYTTFLSRLVLFKKSTYFLVGISLFVNLIFIIINGLNIANNIKTYLILFYL
CCHHHHHHHHHHHHHHHHHHHCCCCHHEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FTSINSLLTIVFSTIKAINLFKDLKDEGIEILVFSKSISRKNIIFTKIGFLILNIVFSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TYILNIIFYVVNIKNNNGINFFYLYAFFNYYFCGLIFASIAALIVSRSNKVAMIIPISCF
HHHHHHHEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHH
LPFLIAGGVANLYSTSKINQVAKYMNINYDKYDSNTILDVEKFYLNNHNDEVYLITKNLN
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCEEEEEEECCC
NPQFSKRQNYFLKAAFDHAKNASTFFHVLSLSVPYQLNNSFYKNDIDPFSVNSQHENYLD
CCCCHHHHCHHEEEHHHHCCCHHHHHHHHHEECCEEECCCCCCCCCCCCCCCCCHHHHHH
KYFNYHGLESKLYDYKLNKHPHLPQFNINENQKEYFVPGALKNTSQFPTLENRNLIYARE
HHHCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEC
NVDRFDVNFIEDDNLFSSTNDFVGELKAVIRNTLESKVFNNFAKKFYDNFDEDIDKPQII
CCCEEECEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEE
AAYNDVINEQSSINFSTIVDENSILFAKKINNYYVKNLVEKKIYFIVALMYYLYFNEERN
EHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LLEKLLKNDKVINFYRPSSIRINVNNYAYDIGGIGSYELMKKVVNNKTLYRYQLQKSNNY
HHHHHHCCCCEEEEECCCEEEEEECCEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCH
VFQTAKEVYSIKRADQIVNKNYYLIILFSTILIISLALIYLKRDYK
HHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA