Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698621
Identifier: 126698621
GI number: 126698621
Start: 1219345
End: 1221258
Strand: Direct
Name: 126698621
Synonym: CD1037
Alternate gene names: NA
Gene position: 1219345-1221258 (Clockwise)
Preceding gene: 126698620
Following gene: 126698622
Centisome position: 28.42
GC content: 23.35
Gene sequence:
>1914_bases ATGGAATATTTATTTGAAAAAAGTAGTTTAAAAGAATATGGAAATGAAGCTTTAGATAAATATAGAGAATTATTAGATAA AACTGGTAATAATTCAAGGTGTATTCTTTTGTTAGTACCAAACAATAACACAAAGATACGATATGAAAGGGCTCTAAGAT TAAATTATAGTGAAGAACTGAAAATAACAACATATATAAGTTTTGTGAAGAAAGAATTAGTTAAATACTGGCCACTAATA ATAGAAAAATGTGATGGAATAAGTACAAAGGTTGTATCTCCAACATTTATATCAAATAGTTTAAGTGAATATTTAATAGT GCAAAAAGTTAAGGAAAAGAGGATACAAGAAGGATATTTTGAAGATATTACAGGAACCAATAAATCCATAGCAAATAGTA TAATGACTAACATAAATAAGTCTGCATTTAATTTAATTGATTTTGATTTTATTGGAGAAAAAATATATTCATCAAAGAAA AATAAAGATAGTATATATAGATTTTCATACACTCAAATGGATGAAATTATATCATATTATATAAATTCCTTACTATCAAA TTCAATTTTAGATAATGCATTAAGCATATATTTATACAATCAATACCTACTTAATGATGATTTTTATTTAAAAAACTTAT TTACAGAAGTGAGATATATAATTGTGGATAGCCTTGAAAGCTCAAGTAATGCAGAAGTTGATTTTATAACAGAAGCATTG GATAATACATTACAAAGTTATATATATTTTGATTATAGTAGGGATTATTCTGTATTTAATAATGTGGATATAGACTATAT AAATGAGAAAATAATATCAAAAATTAAGTCTAAAGAAGAAAATATTAAAAAGAAGGAGATTAGAATAGAAGATTTATACT TATTACCTGCAAATATAGAATTAAATCAATCAAGTCAATTATATAATGAAATGTTAGATTTAATAAGTGAAAAAGTTATA TCTCTTATAGAAGAAGATGTATCTCCAAGAGATATAGCAATTATATCTCCTATAAACAATAGTATATTGGAGCATCAAAT TAGAGATTCTTTGATAGAAAAAAATATAGATGTTTTTAGTACTAAGAAGGATAAAAAAGCTGTGGATTATCCATATGGGA ATGCATTGGTAGTGGCTACATGTATATTTTATGGATATTTAGATTTTATAAAAGAGGATGAATACTTAAGCTTTTTAGAA ACTCTTTTAGAAATAAATAGGATAAAAGCATTTAAGATTTTTAATGAAACAAGACATTTAAGTATTGATGATATAGATGA ACATAGTCAGTATCGTGAGATTTTACAGTATATTGAAGAAAAAAAGAAGAGTGATATAAAAATACATGAATTTTTAACTC AATTTTACATAGATAAAATGTTAAATTTAAAAGAAGGTAAAAAGAATGTTGGGTTATGTAAAAAGATAATAGCTGAAAGT GAGTCTTTTAGTGAAAGTTTAAGTCTACTTGGGATGAAAAAAGAAAAGATATTTGTAGAAGCTTTAAAAAGTACAATAAA CGATTATTACTCTGTTGTCGATATAGAAGAGTTGAAATCCAAAGACAAAATAGTAATAACTACTCCTTATTCATATATAT CATCAAATATAGATAGAAGTATACAAATATGGGTAGATATAGGAAGTAATGCTTGGAATATGAAAATAGAAAAAGATATA AGTAATTTAATTGTACTTAGAAAATCTTTTGAAGAAAAAAAGATTTATACAAATGAAATGGAAGAATATTATAAAAAATA CTATCTATACAATACAGTATATAATTTGTTATTAAATGCAAAGAAAATCTATGCATTTAAAAGTGAATATGCGATTAATG GTTATATCCAAGAGAGTATATTATATAGTATACTTTTAAAAATCTCACATAAAGGAGATAAAAATTATGATTAA
Upstream 100 bases:
>100_bases TTTTTGTAGTTAAATGCAATAATTTGATTGTGTTTTGTAAAATACACAATATGATATAATTAGATAATATACACTTAATT TAATTGAGGAAGGTGATTAT
Downstream 100 bases:
>100_bases TATAAATTATAGAGAAGACCAGATACCAATAATAAATTACGATAATGGTACTATGGCAGTACCAGCAGTACCAGGTGCTG GAAAAACATTTATAATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEELKITTYISFVKKELVKYWPLI IEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYFEDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKK NKDSIYRFSYTQMDEIISYYINSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIELNQSSQLYNEMLDLISEKVI SLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFSTKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLE TLLEINRIKAFKIFNETRHLSIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRSIQIWVDIGSNAWNMKIEKDI SNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNAKKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD
Sequences:
>Translated_637_residues MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEELKITTYISFVKKELVKYWPLI IEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYFEDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKK NKDSIYRFSYTQMDEIISYYINSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIELNQSSQLYNEMLDLISEKVI SLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFSTKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLE TLLEINRIKAFKIFNETRHLSIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRSIQIWVDIGSNAWNMKIEKDI SNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNAKKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD >Mature_637_residues MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEELKITTYISFVKKELVKYWPLI IEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYFEDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKK NKDSIYRFSYTQMDEIISYYINSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIELNQSSQLYNEMLDLISEKVI SLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFSTKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLE TLLEINRIKAFKIFNETRHLSIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRSIQIWVDIGSNAWNMKIEKDI SNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNAKKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74879; Mature: 74879
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEEL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCE KITTYISFVKKELVKYWPLIIEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYF EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH EDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKKNKDSIYRFSYTQMDEIISYY HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH INSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL HHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIE HHHHHHHEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCE LNQSSQLYNEMLDLISEKVISLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFS ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEE TKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLETLLEINRIKAFKIFNETRHL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCC SIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCEEEECCHHHHHCCCCCE IQIWVDIGSNAWNMKIEKDISNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNA EEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD HHHEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEEL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCE KITTYISFVKKELVKYWPLIIEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYF EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH EDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKKNKDSIYRFSYTQMDEIISYY HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH INSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL HHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIE HHHHHHHEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCE LNQSSQLYNEMLDLISEKVISLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFS ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEE TKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLETLLEINRIKAFKIFNETRHL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCC SIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRS HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCEEEECCHHHHHCCCCCE IQIWVDIGSNAWNMKIEKDISNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNA EEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD HHHEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA