Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698621

Identifier: 126698621

GI number: 126698621

Start: 1219345

End: 1221258

Strand: Direct

Name: 126698621

Synonym: CD1037

Alternate gene names: NA

Gene position: 1219345-1221258 (Clockwise)

Preceding gene: 126698620

Following gene: 126698622

Centisome position: 28.42

GC content: 23.35

Gene sequence:

>1914_bases
ATGGAATATTTATTTGAAAAAAGTAGTTTAAAAGAATATGGAAATGAAGCTTTAGATAAATATAGAGAATTATTAGATAA
AACTGGTAATAATTCAAGGTGTATTCTTTTGTTAGTACCAAACAATAACACAAAGATACGATATGAAAGGGCTCTAAGAT
TAAATTATAGTGAAGAACTGAAAATAACAACATATATAAGTTTTGTGAAGAAAGAATTAGTTAAATACTGGCCACTAATA
ATAGAAAAATGTGATGGAATAAGTACAAAGGTTGTATCTCCAACATTTATATCAAATAGTTTAAGTGAATATTTAATAGT
GCAAAAAGTTAAGGAAAAGAGGATACAAGAAGGATATTTTGAAGATATTACAGGAACCAATAAATCCATAGCAAATAGTA
TAATGACTAACATAAATAAGTCTGCATTTAATTTAATTGATTTTGATTTTATTGGAGAAAAAATATATTCATCAAAGAAA
AATAAAGATAGTATATATAGATTTTCATACACTCAAATGGATGAAATTATATCATATTATATAAATTCCTTACTATCAAA
TTCAATTTTAGATAATGCATTAAGCATATATTTATACAATCAATACCTACTTAATGATGATTTTTATTTAAAAAACTTAT
TTACAGAAGTGAGATATATAATTGTGGATAGCCTTGAAAGCTCAAGTAATGCAGAAGTTGATTTTATAACAGAAGCATTG
GATAATACATTACAAAGTTATATATATTTTGATTATAGTAGGGATTATTCTGTATTTAATAATGTGGATATAGACTATAT
AAATGAGAAAATAATATCAAAAATTAAGTCTAAAGAAGAAAATATTAAAAAGAAGGAGATTAGAATAGAAGATTTATACT
TATTACCTGCAAATATAGAATTAAATCAATCAAGTCAATTATATAATGAAATGTTAGATTTAATAAGTGAAAAAGTTATA
TCTCTTATAGAAGAAGATGTATCTCCAAGAGATATAGCAATTATATCTCCTATAAACAATAGTATATTGGAGCATCAAAT
TAGAGATTCTTTGATAGAAAAAAATATAGATGTTTTTAGTACTAAGAAGGATAAAAAAGCTGTGGATTATCCATATGGGA
ATGCATTGGTAGTGGCTACATGTATATTTTATGGATATTTAGATTTTATAAAAGAGGATGAATACTTAAGCTTTTTAGAA
ACTCTTTTAGAAATAAATAGGATAAAAGCATTTAAGATTTTTAATGAAACAAGACATTTAAGTATTGATGATATAGATGA
ACATAGTCAGTATCGTGAGATTTTACAGTATATTGAAGAAAAAAAGAAGAGTGATATAAAAATACATGAATTTTTAACTC
AATTTTACATAGATAAAATGTTAAATTTAAAAGAAGGTAAAAAGAATGTTGGGTTATGTAAAAAGATAATAGCTGAAAGT
GAGTCTTTTAGTGAAAGTTTAAGTCTACTTGGGATGAAAAAAGAAAAGATATTTGTAGAAGCTTTAAAAAGTACAATAAA
CGATTATTACTCTGTTGTCGATATAGAAGAGTTGAAATCCAAAGACAAAATAGTAATAACTACTCCTTATTCATATATAT
CATCAAATATAGATAGAAGTATACAAATATGGGTAGATATAGGAAGTAATGCTTGGAATATGAAAATAGAAAAAGATATA
AGTAATTTAATTGTACTTAGAAAATCTTTTGAAGAAAAAAAGATTTATACAAATGAAATGGAAGAATATTATAAAAAATA
CTATCTATACAATACAGTATATAATTTGTTATTAAATGCAAAGAAAATCTATGCATTTAAAAGTGAATATGCGATTAATG
GTTATATCCAAGAGAGTATATTATATAGTATACTTTTAAAAATCTCACATAAAGGAGATAAAAATTATGATTAA

Upstream 100 bases:

>100_bases
TTTTTGTAGTTAAATGCAATAATTTGATTGTGTTTTGTAAAATACACAATATGATATAATTAGATAATATACACTTAATT
TAATTGAGGAAGGTGATTAT

Downstream 100 bases:

>100_bases
TATAAATTATAGAGAAGACCAGATACCAATAATAAATTACGATAATGGTACTATGGCAGTACCAGCAGTACCAGGTGCTG
GAAAAACATTTATAATAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEELKITTYISFVKKELVKYWPLI
IEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYFEDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKK
NKDSIYRFSYTQMDEIISYYINSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL
DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIELNQSSQLYNEMLDLISEKVI
SLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFSTKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLE
TLLEINRIKAFKIFNETRHLSIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES
ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRSIQIWVDIGSNAWNMKIEKDI
SNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNAKKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD

Sequences:

>Translated_637_residues
MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEELKITTYISFVKKELVKYWPLI
IEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYFEDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKK
NKDSIYRFSYTQMDEIISYYINSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL
DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIELNQSSQLYNEMLDLISEKVI
SLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFSTKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLE
TLLEINRIKAFKIFNETRHLSIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES
ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRSIQIWVDIGSNAWNMKIEKDI
SNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNAKKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD
>Mature_637_residues
MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEELKITTYISFVKKELVKYWPLI
IEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYFEDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKK
NKDSIYRFSYTQMDEIISYYINSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL
DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIELNQSSQLYNEMLDLISEKVI
SLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFSTKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLE
TLLEINRIKAFKIFNETRHLSIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES
ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRSIQIWVDIGSNAWNMKIEKDI
SNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNAKKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74879; Mature: 74879

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEEL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCE
KITTYISFVKKELVKYWPLIIEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYF
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
EDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKKNKDSIYRFSYTQMDEIISYY
HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH
INSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL
HHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIE
HHHHHHHEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCE
LNQSSQLYNEMLDLISEKVISLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFS
ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEE
TKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLETLLEINRIKAFKIFNETRHL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCC
SIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCEEEECCHHHHHCCCCCE
IQIWVDIGSNAWNMKIEKDISNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNA
EEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD
HHHEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEYLFEKSSLKEYGNEALDKYRELLDKTGNNSRCILLLVPNNNTKIRYERALRLNYSEEL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCE
KITTYISFVKKELVKYWPLIIEKCDGISTKVVSPTFISNSLSEYLIVQKVKEKRIQEGYF
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
EDITGTNKSIANSIMTNINKSAFNLIDFDFIGEKIYSSKKNKDSIYRFSYTQMDEIISYY
HHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHH
INSLLSNSILDNALSIYLYNQYLLNDDFYLKNLFTEVRYIIVDSLESSSNAEVDFITEAL
HHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DNTLQSYIYFDYSRDYSVFNNVDIDYINEKIISKIKSKEENIKKKEIRIEDLYLLPANIE
HHHHHHHEEEEECCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEEEEEECCCE
LNQSSQLYNEMLDLISEKVISLIEEDVSPRDIAIISPINNSILEHQIRDSLIEKNIDVFS
ECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEE
TKKDKKAVDYPYGNALVVATCIFYGYLDFIKEDEYLSFLETLLEINRIKAFKIFNETRHL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCC
SIDDIDEHSQYREILQYIEEKKKSDIKIHEFLTQFYIDKMLNLKEGKKNVGLCKKIIAES
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
ESFSESLSLLGMKKEKIFVEALKSTINDYYSVVDIEELKSKDKIVITTPYSYISSNIDRS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCCEEEECCHHHHHCCCCCE
IQIWVDIGSNAWNMKIEKDISNLIVLRKSFEEKKIYTNEMEEYYKKYYLYNTVYNLLLNA
EEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKIYAFKSEYAINGYIQESILYSILLKISHKGDKNYD
HHHEEECCCCEECHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA