Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698591

Identifier: 126698591

GI number: 126698591

Start: 1175631

End: 1175894

Strand: Direct

Name: 126698591

Synonym: CD1007

Alternate gene names: NA

Gene position: 1175631-1175894 (Clockwise)

Preceding gene: 126698590

Following gene: 126698593

Centisome position: 27.4

GC content: 32.2

Gene sequence:

>264_bases
ATGGAAGAAACTAAATTTTGCCAATGCTGTGCAATGCCAATGGGACAAACTGATGAATTATATGGGACAAATAAAGATGG
AAGTAAAAGTACTGATTATTGTAGTTATTGTTTTAAAGATGGTGAGTTTACAGCTGATATAAGTATGGAAGAGATGATAG
AAGTTTGTATCCCTCATATGCTTCAAAGTAATAAGGATATGACTGAAGATGAAGCAAGAACAATGATGAACAATTTCTTT
CCAACATTAAAACGCTGGAAATAA

Upstream 100 bases:

>100_bases
TTCATTTTTTATTACTAATATGACATAAACATGTCATATTAGCATTGATATACTTTTAATATGGTTAAGAGCCAAAGAAA
AATATAAGGAGTGATTTAAA

Downstream 100 bases:

>100_bases
TTTTATGCAAAATTAGTTATATGCAAAACATGAAATATGGTGTTGAGAATAAGGGGTGGTGTGCTTTATAGCATACCACC
TGTTTTGTTACTTGGAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHMLQSNKDMTEDEARTMMNNFF
PTLKRWK

Sequences:

>Translated_87_residues
MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHMLQSNKDMTEDEARTMMNNFF
PTLKRWK
>Mature_87_residues
MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHMLQSNKDMTEDEARTMMNNFF
PTLKRWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10140; Mature: 10140

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
10.3 %Met     (Translated Protein)
17.2 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
10.3 %Met     (Mature Protein)
17.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHM
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHH
LQSNKDMTEDEARTMMNNFFPTLKRWK
HHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEETKFCQCCAMPMGQTDELYGTNKDGSKSTDYCSYCFKDGEFTADISMEEMIEVCIPHM
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHH
LQSNKDMTEDEARTMMNNFFPTLKRWK
HHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA