Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698541

Identifier: 126698541

GI number: 126698541

Start: 1125950

End: 1126510

Strand: Direct

Name: 126698541

Synonym: CD0957

Alternate gene names: NA

Gene position: 1125950-1126510 (Clockwise)

Preceding gene: 126698540

Following gene: 126698542

Centisome position: 26.24

GC content: 26.74

Gene sequence:

>561_bases
ATGAAGAAAAAAGTATGTTTTTTATTTTCTATTCTTATAGTTATCTGTTTAGCTATTGTAGGATGTTCTAATTCAGAAAG
TCCAGAGGAGAGTAGTAAAAATAATGAACCAAAAAAAGAAGAAAAAAAGGATAAAGAAGTAGTCATAGGAGAGAAAATTA
TTTCAGATAAAATGGAAATCACTATTAATAATATTGAATTCTCTTATGATGTTTTACCAAAGGTTAAGGAAAGTTTATAT
ACACATTATCCTGCTGAGTCAGGCAAAGTATATATTGATATTGCTGCTGATATAAAAAATACTCAAAAACAAGAGTTAAA
TTGTTCAGATTTACTAACTATTGAAGCAAATTATAATGATGGGTATAAATATTCATCACAAACAATAGTAGAAGATGAAA
CCACAGGTTTTACTTATGATAATATTTCTAGTATTGACCCTTTAGAAACAAAGGGAGTTAGATTTATAATCGATTGCCCT
GATGAAGTAAAAACAAGTGATAAGCCAGTAATATTAAGTTTTACATTTGATGGGAATAAGTATGTTTATAAAATGAAGTA
A

Upstream 100 bases:

>100_bases
AGTAAGTGTTTTTTTAATGAAAGGAGGTGATAATAATGTAAAAATTTTACTAATATAGTATAATATTGTTAAAGAATATA
ATTTAGGGGGATATTATATT

Downstream 100 bases:

>100_bases
TTTATACAAAAATGAATATATTATAATACCAAGGAGATATTTTATGGATGATATAGTAGAATATATATTTTGTAGCGAGT
GTGGAGCAAAGTGTTTAAAA

Product: phage lipoprotein

Products: NA

Alternate protein names: Lipoprotein

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKKKVCFLFSILIVICLAIVGCSNSESPEESSKNNEPKKEEKKDKEVVIGEKIISDKMEITINNIEFSYDVLPKVKESLY
THYPAESGKVYIDIAADIKNTQKQELNCSDLLTIEANYNDGYKYSSQTIVEDETTGFTYDNISSIDPLETKGVRFIIDCP
DEVKTSDKPVILSFTFDGNKYVYKMK

Sequences:

>Translated_186_residues
MKKKVCFLFSILIVICLAIVGCSNSESPEESSKNNEPKKEEKKDKEVVIGEKIISDKMEITINNIEFSYDVLPKVKESLY
THYPAESGKVYIDIAADIKNTQKQELNCSDLLTIEANYNDGYKYSSQTIVEDETTGFTYDNISSIDPLETKGVRFIIDCP
DEVKTSDKPVILSFTFDGNKYVYKMK
>Mature_186_residues
MKKKVCFLFSILIVICLAIVGCSNSESPEESSKNNEPKKEEKKDKEVVIGEKIISDKMEITINNIEFSYDVLPKVKESLY
THYPAESGKVYIDIAADIKNTQKQELNCSDLLTIEANYNDGYKYSSQTIVEDETTGFTYDNISSIDPLETKGVRFIIDCP
DEVKTSDKPVILSFTFDGNKYVYKMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21116; Mature: 21116

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVCFLFSILIVICLAIVGCSNSESPEESSKNNEPKKEEKKDKEVVIGEKIISDKMEI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCEEEECHHHHCCCEEE
TINNIEFSYDVLPKVKESLYTHYPAESGKVYIDIAADIKNTQKQELNCSDLLTIEANYND
EEEEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHCCCCCCEEEEEECCCC
GYKYSSQTIVEDETTGFTYDNISSIDPLETKGVRFIIDCPDEVKTSDKPVILSFTFDGNK
CEEECCCEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCHHHCCCCCCEEEEEEECCCE
YVYKMK
EEEEEC
>Mature Secondary Structure
MKKKVCFLFSILIVICLAIVGCSNSESPEESSKNNEPKKEEKKDKEVVIGEKIISDKMEI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCEEEECHHHHCCCEEE
TINNIEFSYDVLPKVKESLYTHYPAESGKVYIDIAADIKNTQKQELNCSDLLTIEANYND
EEEEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHCCCCCCEEEEEECCCC
GYKYSSQTIVEDETTGFTYDNISSIDPLETKGVRFIIDCPDEVKTSDKPVILSFTFDGNK
CEEECCCEEEECCCCCCEECCCCCCCCCCCCCEEEEEECCHHHCCCCCCEEEEEEECCCE
YVYKMK
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA