Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698542

Identifier: 126698542

GI number: 126698542

Start: 1126554

End: 1127123

Strand: Direct

Name: 126698542

Synonym: CD0958

Alternate gene names: NA

Gene position: 1126554-1127123 (Clockwise)

Preceding gene: 126698541

Following gene: 126698543

Centisome position: 26.26

GC content: 31.75

Gene sequence:

>570_bases
ATGGATGATATAGTAGAATATATATTTTGTAGCGAGTGTGGAGCAAAGTGTTTAAAAGGAAGCAAGTTTTGCAGTGAATG
TGGAACGGAAATAGCTGATATAAAAATGTTAAATGAAAGCATTATTAAAGAAAAGGAATATGATTTGAAGGGTATTGATT
TACAACATGTAATGCAAGAAACAAGTTTTATAAAAGCTTCATCTGTAAGAAGATTGAAAGAATTAACTGGAATAGAGTTG
GATGATTGTAGAAAAATATTAGAAGAACCATATCAAAAATATTATAATGAAAATGCTGATATGCTTGAAGAAAAAAGAAA
AAAAGAAGATGATATATCAAAAATTAGAAAAGCCAAAGAGGAAAAGAAAGAAAAAGAAAAAATAGCTTGTTGCCCTGCAT
GTGGTTCAACTTCTTTGACAACACATAAAAAAGGTTTTGGCATAGGAAAAGCTATAACAGGAGCTACTATAGCAGGAGGC
ATTGGTCTCGTAGCAGGAAACATAGGAGCAAAGAAAGTTAGAGTTACATGCTTGAACTGTGGGAAACAGTTTTGGGCAGG
CAAAAAATAG

Upstream 100 bases:

>100_bases
CCAGTAATATTAAGTTTTACATTTGATGGGAATAAGTATGTTTATAAAATGAAGTAATTTATACAAAAATGAATATATTA
TAATACCAAGGAGATATTTT

Downstream 100 bases:

>100_bases
ATACTAAAAATAAAACACTTACTTAGGTAGGTGTTTTTTATGTGAAAATTTAAGAAAGGAGAGTGAAGAAATGGCTACAA
TACAAACATCTATCCGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MDDIVEYIFCSECGAKCLKGSKFCSECGTEIADIKMLNESIIKEKEYDLKGIDLQHVMQETSFIKASSVRRLKELTGIEL
DDCRKILEEPYQKYYNENADMLEEKRKKEDDISKIRKAKEEKKEKEKIACCPACGSTSLTTHKKGFGIGKAITGATIAGG
IGLVAGNIGAKKVRVTCLNCGKQFWAGKK

Sequences:

>Translated_189_residues
MDDIVEYIFCSECGAKCLKGSKFCSECGTEIADIKMLNESIIKEKEYDLKGIDLQHVMQETSFIKASSVRRLKELTGIEL
DDCRKILEEPYQKYYNENADMLEEKRKKEDDISKIRKAKEEKKEKEKIACCPACGSTSLTTHKKGFGIGKAITGATIAGG
IGLVAGNIGAKKVRVTCLNCGKQFWAGKK
>Mature_189_residues
MDDIVEYIFCSECGAKCLKGSKFCSECGTEIADIKMLNESIIKEKEYDLKGIDLQHVMQETSFIKASSVRRLKELTGIEL
DDCRKILEEPYQKYYNENADMLEEKRKKEDDISKIRKAKEEKKEKEKIACCPACGSTSLTTHKKGFGIGKAITGATIAGG
IGLVAGNIGAKKVRVTCLNCGKQFWAGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21019; Mature: 21019

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDIVEYIFCSECGAKCLKGSKFCSECGTEIADIKMLNESIIKEKEYDLKGIDLQHVMQE
CHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TSFIKASSVRRLKELTGIELDDCRKILEEPYQKYYNENADMLEEKRKKEDDISKIRKAKE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
EKKEKEKIACCPACGSTSLTTHKKGFGIGKAITGATIAGGIGLVAGNIGAKKVRVTCLNC
HHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHH
GKQFWAGKK
HHHHCCCCC
>Mature Secondary Structure
MDDIVEYIFCSECGAKCLKGSKFCSECGTEIADIKMLNESIIKEKEYDLKGIDLQHVMQE
CHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TSFIKASSVRRLKELTGIELDDCRKILEEPYQKYYNENADMLEEKRKKEDDISKIRKAKE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH
EKKEKEKIACCPACGSTSLTTHKKGFGIGKAITGATIAGGIGLVAGNIGAKKVRVTCLNC
HHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHH
GKQFWAGKK
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA