Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126696410

Identifier: 126696410

GI number: 126696410

Start: 922582

End: 923385

Strand: Reverse

Name: 126696410

Synonym: P9301_10721

Alternate gene names: NA

Gene position: 923385-922582 (Counterclockwise)

Preceding gene: 126696411

Following gene: 126696409

Centisome position: 56.24

GC content: 22.89

Gene sequence:

>804_bases
ATGAACAGTAATATAAGATTTGAATTATCATTTAAAAATATTTCTCAGTTAGACAATAAACTTAATTTCTGCAAATTAAA
TAATATAAAAAATATCAATATTCCATGTAAAGGACTTATAAAGAAGGATTTATTTAATTCAACTATAAAATATATATCTA
AAGACTATTATGAATTTAATGTGACCTATCACTATAGTCTTTATCATCAATATTCAAAAAATAAAGAAAAATCGTATCAG
GATTTCTTAGATTTTGTTAAAAGTTCTCAGACTAATCAAAATTATGAAATTCTGTTAGTGTCGGGATCTAATAAGAAAAA
AAACTTTGACTCAGTTGATGTATTATCTTATTTAAAAAAAGAAAAAAATTTAAAAGTTAAATTAGGTATAGCTTACAATC
CATATTTGAAAAAATATTATAATATTTCGTCAGAAAGAGAGAGGTTCGAAAGAAAAATTTCAACTGGATTAATAAATTCA
ATTTGGTTTCAATATGGTACAGACATTAAAGTTCTTCATAATGAGTTGACTTATCTCAAGAAAATAACAAAAGACGAAAG
ATTAAATCTATTTGGAAGTTTATTTATTCCTTCTAAACAATTTATATCGCGGTTTAAATTTCGTCCTTGGAAAGAGGTAT
ACATATCAGAAAAGTGTTTATTTGCCTTAGATAATTTTCTTGATTTTACAAGAGATTTAGTTAGTTTTTATAAAAGTAAT
AATATTACTCCTGTAATTGAATCTGATTTTTCATCATCAGATAAACTTGATTCTGTTTATAGTTTTTTAGAAAATGAAAG
ATAA

Upstream 100 bases:

>100_bases
TTCTAAAGTCTAATAATAAAAAGACGTCATCCAAAATAAGAATCGTAGCAGATGCATGTTTTCGTTAATATGTTGAGTGA
TTAATTATGACTACTAAATA

Downstream 100 bases:

>100_bases
TTTTTGTCAATATTAATCCTATGAAAAGTGATGTTACATATGACTTGTTAATAATAGGTGGAGGTATATCCGCTTGTGTT
TTTGCTTCGAAGTATCTGAA

Product: amphipathic helix repeat-containing protein

Products: NA

Alternate protein names: Paired Amphipathic Helix Repeat

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFNVTYHYSLYHQYSKNKEKSYQ
DFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKKEKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINS
IWFQYGTDIKVLHNELTYLKKITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN
NITPVIESDFSSSDKLDSVYSFLENER

Sequences:

>Translated_267_residues
MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFNVTYHYSLYHQYSKNKEKSYQ
DFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKKEKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINS
IWFQYGTDIKVLHNELTYLKKITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN
NITPVIESDFSSSDKLDSVYSFLENER
>Mature_267_residues
MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFNVTYHYSLYHQYSKNKEKSYQ
DFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKKEKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINS
IWFQYGTDIKVLHNELTYLKKITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN
NITPVIESDFSSSDKLDSVYSFLENER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31852; Mature: 31852

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFN
CCCCEEEEEEHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
VTYHYSLYHQYSKNKEKSYQDFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKK
EEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
EKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINSIWFQYGTDIKVLHNELTYLK
CCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN
HHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NITPVIESDFSSSDKLDSVYSFLENER
CCCEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNSNIRFELSFKNISQLDNKLNFCKLNNIKNINIPCKGLIKKDLFNSTIKYISKDYYEFN
CCCCEEEEEEHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE
VTYHYSLYHQYSKNKEKSYQDFLDFVKSSQTNQNYEILLVSGSNKKKNFDSVDVLSYLKK
EEEEEEEHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
EKNLKVKLGIAYNPYLKKYYNISSERERFERKISTGLINSIWFQYGTDIKVLHNELTYLK
CCCCEEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KITKDERLNLFGSLFIPSKQFISRFKFRPWKEVYISEKCLFALDNFLDFTRDLVSFYKSN
HHCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NITPVIESDFSSSDKLDSVYSFLENER
CCCEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA