Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126696200

Identifier: 126696200

GI number: 126696200

Start: 747433

End: 748092

Strand: Reverse

Name: 126696200

Synonym: P9301_08621

Alternate gene names: NA

Gene position: 748092-747433 (Counterclockwise)

Preceding gene: 126696201

Following gene: 126696199

Centisome position: 45.56

GC content: 30.15

Gene sequence:

>660_bases
ATGAAAATTGCAATTACTGGTGCATCGGGCAAAACAGGATATAGAATCTCCGAAGAAGCAGTTAAAAATGGATATAAAGT
AAGGCAAATCATTAGAAAAAATTCAAAAGTCACAGCAGGACTAGAGAGTTTAGAAACAATTAGGGTTTCATTAGACAAAA
AAGGAGAACTTGATAAAGCTTTAAAAAACATTGATGCTTTGGTAATTGCGACTGGAGCAAGAGCATCATTAGATTTAACG
GGTCCTGCAAAGGTTGATGCATTAGGCGTATACAGGCAATTAGAGAGTTGCAAAAGAGTTGGTATTAAAAGGGTTATTTT
AGTTAGTTCCCTTTGTACTGGTAAATTATTTCACCCATTAAACTTATTTGGTTTAATTCTTATTTGGAAGAAAATAGGTG
AAAACTTTCTACGAAATTCAAATTTTGAATGGACTATTATTAGACCTGGAGGATTAAAGGAAAATGAAGATATTAAATCA
GAAAATATAAATTATTCAAAAGAGGATACTCAATTTAATGGATCAATCCCTAGAAGATTAGTTGCGGAATGTTGCATAGA
TTCTTTAAAAAACAAAGAATCCATAAATAAATTAATAGAAGTTACAAGTTCGAATGATAATAAAAAGATATCTTTTAAAA
AAGCTATGCAAATGATTTAA

Upstream 100 bases:

>100_bases
ATGTTATTTGTGTCGCACTCTTTATCCCAAAAGAAAAAAGAAATTTATATGTAAAAAGCCTTAAGAAATTTATATAATAT
TTAAATTAGTTTTTTTAACC

Downstream 100 bases:

>100_bases
AAGATGTAAATATATAAATTAAAACTATGAAAATAAATCCCAAAATTGACGCTTTGCAATTAATGCTTACTGATTTAAGA
ACTAGAAATGAGCCAATAAG

Product: putative NADH-flavin reductase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NADH-Flavin Reductase; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerase-Like; NAD-Dependent Epimerase/Dehydratase Family Protein; NmrA-Like; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKALKNIDALVIATGARASLDLT
GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKS
ENINYSKEDTQFNGSIPRRLVAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI

Sequences:

>Translated_219_residues
MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKALKNIDALVIATGARASLDLT
GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKS
ENINYSKEDTQFNGSIPRRLVAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
>Mature_219_residues
MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKALKNIDALVIATGARASLDLT
GPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPLNLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKS
ENINYSKEDTQFNGSIPRRLVAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=221, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24359; Mature: 24359

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKA
CEEEEECCCCCCCCEECHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHH
LKNIDALVIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL
HHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHH
NLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQFNGSIPRRL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC
>Mature Secondary Structure
MKIAITGASGKTGYRISEEAVKNGYKVRQIIRKNSKVTAGLESLETIRVSLDKKGELDKA
CEEEEECCCCCCCCEECHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHH
LKNIDALVIATGARASLDLTGPAKVDALGVYRQLESCKRVGIKRVILVSSLCTGKLFHPL
HHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHH
NLFGLILIWKKIGENFLRNSNFEWTIIRPGGLKENEDIKSENINYSKEDTQFNGSIPRRL
HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
VAECCIDSLKNKESINKLIEVTSSNDNKKISFKKAMQMI
HHHHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA