Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
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Accession | NC_009091 |
Length | 1,641,879 |
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The map label for this gene is yfcK [C]
Identifier: 126695976
GI number: 126695976
Start: 567138
End: 568049
Strand: Reverse
Name: yfcK [C]
Synonym: P9301_06381
Alternate gene names: 126695976
Gene position: 568049-567138 (Counterclockwise)
Preceding gene: 126695977
Following gene: 126695975
Centisome position: 34.6
GC content: 28.62
Gene sequence:
>912_bases TTGTCTGAATTAATAGAAATTTTAACTAAAGATGGTAGTTACTCATTAAGAAGTTTGTTTTTTCAAGAGAACTTCCATAG TTTATTGGGCGCATTGGAGGAAACAAAGTTGAAATTTACATCTACTTCTAATTTACAAAGATTTAAGGGTAAATCTCTTA ATGTATTGGATATATGTTTTGGTTTAGGATACAATTCCGCTTCTTTATTAGATGAATTAATTAAACAAAAATCGTATTTA AATTTGTATGCGTTGGAGATTGATAAAAAGCCACTTGAATATTCGCTGAGAAATGAATCTTTTCTTAAATTATGGGATCC AAAAGTCAAAACAATATTTGAATCAATGTATCGACAAGATTACTTTGAGGATCAATTTTTTAAATGCAGTGTGTTGTGGG GTGATGCGAGAGAAAAAATCAAAATTATTCCTTCCTCTATTAAATTCGATCTGATTTATTTAGATGGTTTTTCTCCTCAA AAATGCCCACAAGTATGGACAATGGAATTTTTATCTAAAGTCTCAGAAAATCTTAATTCTCAAGGTTATTTAATAACTTA TTCTTCATCAGCGGCAGTAAGAAAAACTTTAAGAAATCTTGGATTAGAAATTTTTACTATTAAGCCAAGTATTAAAAATA GAATTTTTTGGAGTCAGGGAACTGTTGCGATACCAAAATTTAATAACAAAAAATTAAAACCTAATTTCAATTTTGAAAAG TTATCTTTAATGGAAGAGGAACATCTCTTAACTAAAGCAAGTATTCCATATAGAGATCAAGATTTAAACTCAAGCAAAGA CGATATAATCAAGAGAAGATTGGATGAGCAATTTTTTTCAAATCTATTATCTACAAATAAATGGAGAGAGAAGTGGGGAA TGACGAAGTTATCCGTTAAGAGTAAGATTTAA
Upstream 100 bases:
>100_bases CAAAGGTACCTCAAAAATCATGAGAGCAGATGCAGCTAGCGTCTCGTATCCCACTTTTTGGGAAGAGCTTGCCAAACTAA CTAACTAGCCTAAAAAGTTT
Downstream 100 bases:
>100_bases ATAGGGATTTCAAATAAACATGTTAAGTGTTGCGATATTAGCGGCAGGCAAGGGCACTAGGATGGAAAGCTCATTGCCAA AAGTTTTACATAAAATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MSELIEILTKDGSYSLRSLFFQENFHSLLGALEETKLKFTSTSNLQRFKGKSLNVLDICFGLGYNSASLLDELIKQKSYL NLYALEIDKKPLEYSLRNESFLKLWDPKVKTIFESMYRQDYFEDQFFKCSVLWGDAREKIKIIPSSIKFDLIYLDGFSPQ KCPQVWTMEFLSKVSENLNSQGYLITYSSSAAVRKTLRNLGLEIFTIKPSIKNRIFWSQGTVAIPKFNNKKLKPNFNFEK LSLMEEEHLLTKASIPYRDQDLNSSKDDIIKRRLDEQFFSNLLSTNKWREKWGMTKLSVKSKI
Sequences:
>Translated_303_residues MSELIEILTKDGSYSLRSLFFQENFHSLLGALEETKLKFTSTSNLQRFKGKSLNVLDICFGLGYNSASLLDELIKQKSYL NLYALEIDKKPLEYSLRNESFLKLWDPKVKTIFESMYRQDYFEDQFFKCSVLWGDAREKIKIIPSSIKFDLIYLDGFSPQ KCPQVWTMEFLSKVSENLNSQGYLITYSSSAAVRKTLRNLGLEIFTIKPSIKNRIFWSQGTVAIPKFNNKKLKPNFNFEK LSLMEEEHLLTKASIPYRDQDLNSSKDDIIKRRLDEQFFSNLLSTNKWREKWGMTKLSVKSKI >Mature_302_residues SELIEILTKDGSYSLRSLFFQENFHSLLGALEETKLKFTSTSNLQRFKGKSLNVLDICFGLGYNSASLLDELIKQKSYLN LYALEIDKKPLEYSLRNESFLKLWDPKVKTIFESMYRQDYFEDQFFKCSVLWGDAREKIKIIPSSIKFDLIYLDGFSPQK CPQVWTMEFLSKVSENLNSQGYLITYSSSAAVRKTLRNLGLEIFTIKPSIKNRIFWSQGTVAIPKFNNKKLKPNFNFEKL SLMEEEHLLTKASIPYRDQDLNSSKDDIIKRRLDEQFFSNLLSTNKWREKWGMTKLSVKSKI
Specific function: Unknown
COG id: COG4121
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008471 [H]
Pfam domain/function: PF05430 DUF752 [H]
EC number: NA
Molecular weight: Translated: 35434; Mature: 35303
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELIEILTKDGSYSLRSLFFQENFHSLLGALEETKLKFTSTSNLQRFKGKSLNVLDICF CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCCCCHHHHHH GLGYNSASLLDELIKQKSYLNLYALEIDKKPLEYSLRNESFLKLWDPKVKTIFESMYRQD HCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH YFEDQFFKCSVLWGDAREKIKIIPSSIKFDLIYLDGFSPQKCPQVWTMEFLSKVSENLNS CCCCCCEEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC QGYLITYSSSAAVRKTLRNLGLEIFTIKPSIKNRIFWSQGTVAIPKFNNKKLKPNFNFEK CCEEEEECCCHHHHHHHHHCCEEEEEECCCHHCCEEECCCCEEECCCCCCCCCCCCCHHH LSLMEEEHLLTKASIPYRDQDLNSSKDDIIKRRLDEQFFSNLLSTNKWREKWGMTKLSVK HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECC SKI CCC >Mature Secondary Structure SELIEILTKDGSYSLRSLFFQENFHSLLGALEETKLKFTSTSNLQRFKGKSLNVLDICF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCCCCHHHHHH GLGYNSASLLDELIKQKSYLNLYALEIDKKPLEYSLRNESFLKLWDPKVKTIFESMYRQD HCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH YFEDQFFKCSVLWGDAREKIKIIPSSIKFDLIYLDGFSPQKCPQVWTMEFLSKVSENLNS CCCCCCEEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCC QGYLITYSSSAAVRKTLRNLGLEIFTIKPSIKNRIFWSQGTVAIPKFNNKKLKPNFNFEK CCEEEEECCCHHHHHHHHHCCEEEEEECCCHHCCEEECCCCEEECCCCCCCCCCCCCHHH LSLMEEEHLLTKASIPYRDQDLNSSKDDIIKRRLDEQFFSNLLSTNKWREKWGMTKLSVK HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEECC SKI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]