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The map label for this gene is uxuR [H]

Identifier: 126447897

GI number: 126447897

Start: 1786473

End: 1787177

Strand: Direct

Name: uxuR [H]

Synonym: BMA10247_A1856

Alternate gene names: 126447897

Gene position: 1786473-1787177 (Clockwise)

Preceding gene: 126447792

Following gene: 126445751

Centisome position: 75.93

GC content: 70.07

Gene sequence:

>705_bases
ATGTTCGAGAAAATCCCGACCCGGGCGATGAGCGACACGGTCGCCCAGCAGTTGCTCAAGCAGATCGAGATCGGCGGCTT
CGCCGGCACCGGCAAGCTGCCGACCGAGGCCGTGCTCGCGCAGGAGTTCGGCGTGAGCCGCACGGTGATCCGCGAGGCGA
TCTCGCGCCTGAAGAACGAAGGCGTCGTCGAGCCGCGTCAGGGCAGCGGCGTCTACATCGCGCGGCACGCGGCGATCCGG
CCGCTGCGGATCGATTACGCGGAGGCGGTCGAGGCGAGTTCGCTGCCGCACCTGCTCGCGGTGCGCCGCGCGATCGAAGC
CGAGGTGGCCGCCGAAGCCGCGCTCTGCCGCACCGACGAGGACATGGAGGACATCGACGCCGCGCTCGCGAAAATCGACG
ACGCGGTGGCCGAAGGCCGCGACGGCGTCGCGGAAGACGTCGCGTTCCACCGGACGATCGCGAGCGTCACCGGCAACCCG
TACTTTCTGAAGACGCTCAGCTTCCTGAACCAGTACCTCGAAGCGGGCGTGAAGGTCACGCGCGGCAACGAGGCGACCCG
CGAGGACTTCTCGCGGCAGGTGCGCGAGGAGCACGCGGCGATCGCCGACGCGATCCGCGCGCGCGATCCGTCGGCCGCCG
GCAACGCGGCGCGCGCGCATATGTACAACGCGGCGCGCCGCCTGGAGCAAGCCGGCATTTGCTGA

Upstream 100 bases:

>100_bases
CCGGAGCCGTTTCGCCAAAATCCGCCCCCAAGGGTTATCCCGAATGCTCACTCGATCTCCAAGTTGTATGATGACCACAT
CACATGACAAGACTTCCGCC

Downstream 100 bases:

>100_bases
GCCGCGATCCGCGAACGGCCGCGCGCCGCCCGCGAATCGCCCGACGAACGAATCGAGAAACCGCGAACAAGGTTGACCAT
GTCACGCAATGTTGGAGTCA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFEKIPTRAMSDTVAQQLLKQIEIGGFAGTGKLPTEAVLAQEFGVSRTVIREAISRLKNEGVVEPRQGSGVYIARHAAIR
PLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALCRTDEDMEDIDAALAKIDDAVAEGRDGVAEDVAFHRTIASVTGNP
YFLKTLSFLNQYLEAGVKVTRGNEATREDFSRQVREEHAAIADAIRARDPSAAGNAARAHMYNAARRLEQAGIC

Sequences:

>Translated_234_residues
MFEKIPTRAMSDTVAQQLLKQIEIGGFAGTGKLPTEAVLAQEFGVSRTVIREAISRLKNEGVVEPRQGSGVYIARHAAIR
PLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALCRTDEDMEDIDAALAKIDDAVAEGRDGVAEDVAFHRTIASVTGNP
YFLKTLSFLNQYLEAGVKVTRGNEATREDFSRQVREEHAAIADAIRARDPSAAGNAARAHMYNAARRLEQAGIC
>Mature_234_residues
MFEKIPTRAMSDTVAQQLLKQIEIGGFAGTGKLPTEAVLAQEFGVSRTVIREAISRLKNEGVVEPRQGSGVYIARHAAIR
PLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALCRTDEDMEDIDAALAKIDDAVAEGRDGVAEDVAFHRTIASVTGNP
YFLKTLSFLNQYLEAGVKVTRGNEATREDFSRQVREEHAAIADAIRARDPSAAGNAARAHMYNAARRLEQAGIC

Specific function: Repressor for the uxuRBA operon [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790032, Length=225, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI48994955, Length=230, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1789621, Length=219, Percent_Identity=28.7671232876712, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1789353, Length=231, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1790780, Length=200, Percent_Identity=28, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786303, Length=226, Percent_Identity=31.858407079646, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87082208, Length=239, Percent_Identity=28.8702928870293, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25358; Mature: 25358

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKIPTRAMSDTVAQQLLKQIEIGGFAGTGKLPTEAVLAQEFGVSRTVIREAISRLKNE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
GVVEPRQGSGVYIARHAAIRPLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALCRTDE
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DMEDIDAALAKIDDAVAEGRDGVAEDVAFHRTIASVTGNPYFLKTLSFLNQYLEAGVKVT
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEE
RGNEATREDFSRQVREEHAAIADAIRARDPSAAGNAARAHMYNAARRLEQAGIC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEKIPTRAMSDTVAQQLLKQIEIGGFAGTGKLPTEAVLAQEFGVSRTVIREAISRLKNE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC
GVVEPRQGSGVYIARHAAIRPLRIDYAEAVEASSLPHLLAVRRAIEAEVAAEAALCRTDE
CCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DMEDIDAALAKIDDAVAEGRDGVAEDVAFHRTIASVTGNPYFLKTLSFLNQYLEAGVKVT
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEE
RGNEATREDFSRQVREEHAAIADAIRARDPSAAGNAARAHMYNAARRLEQAGIC
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]