Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447792
Identifier: 126447792
GI number: 126447792
Start: 1783756
End: 1784664
Strand: Direct
Name: 126447792
Synonym: BMA10247_A1853
Alternate gene names: NA
Gene position: 1783756-1784664 (Clockwise)
Preceding gene: 126446360
Following gene: 126447897
Centisome position: 75.82
GC content: 63.15
Gene sequence:
>909_bases GTGATGAGCCACGCGCGCGCCGACACAAGCCGCGAACTGACGCCCGTCGAAGCCCGAATCGCCCAAACGTTTGTCAGGCC GGAGCATCTTCGCGCCATAGCGGCGGCAGCGCGAGCAGGCTCCTTTGCCGTCAGCTTCCGGGCGAGCGGCCAGTTGTCCC TGAAGCGCCTGGCTAACGGCGCACCTGCCAAAGGCCACGATATCCTCGAAAAGACGATCAAGCCCGGTTCCGTGCAAGAG GTGTACGGTGCGGATTCCGAGCGTCGGCTGGCACAGATTGAACGCGCGGACATCGACGGCTATGTCGGACATTGGGGCCG CGACAAGCTGCTCGGTCTTTACATGGGCCCGGCAGCGAACGAGCGCGACACGCCCATGTTATTCGGCGCGCTCAGATCGA CACCTTCGGGCCACCGCTACTATCCGGTCGACCATGACGACCTCGAGGGCAGCCTCGCATTGCTCAAGCGCACGCAAGGC CCGTCGGGAACGGCGGGAAGCTTCTGGATGAGCCTTCCCTACACCGGTGACTACGACACACATGACATGATCAATATGGC GGGGCATCGCGCCCCCGTGCCGAGCGGCAGTCGCGACGAGCACCGCATCATGCGCAGCCTCAATGTCGCCATCGAAGCGA TCGATCCGATACGTAAGGCGTCATCAGGCTCGCACAGGCTGATACAGCACGGCCCACAGCACAATTACGTCGCGCATATG CGAACGAACGAGCAAGGCGCGGTGATCGACGAAGCCGTCGCGCGCGCGTCGTTCCCGCTCGCGATGTGCGATCGAGGAAC ATGGAGCGTGATCGAAACGCCCGAGGCGCTTGCCGCATTCTATCGGCAGCACGGCGTCGTGCTGAAGGAGAAATGGCGAG AGAAACGGGCGAATACGTTCACGGCGTAG
Upstream 100 bases:
>100_bases GGGAGCCGGCCCGCTCGCCGGACTGACCGCGCTCAAAGCCGATCGGGCCCAATGCATGTCGGCTCGCCCGTCTATCCGCT CGACCACGAAAGCACCGGCA
Downstream 100 bases:
>100_bases CTTGGGACGCTCGGCTCGCCGACCATGGTGCCTTGCGCGGCCGCGTTGCCGGCGGCCGTGCCGTTGAGCGTCGGCGGCAT GCCGGATCGACAAGCCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MMSHARADTSRELTPVEARIAQTFVRPEHLRAIAAAARAGSFAVSFRASGQLSLKRLANGAPAKGHDILEKTIKPGSVQE VYGADSERRLAQIERADIDGYVGHWGRDKLLGLYMGPAANERDTPMLFGALRSTPSGHRYYPVDHDDLEGSLALLKRTQG PSGTAGSFWMSLPYTGDYDTHDMINMAGHRAPVPSGSRDEHRIMRSLNVAIEAIDPIRKASSGSHRLIQHGPQHNYVAHM RTNEQGAVIDEAVARASFPLAMCDRGTWSVIETPEALAAFYRQHGVVLKEKWREKRANTFTA
Sequences:
>Translated_302_residues MMSHARADTSRELTPVEARIAQTFVRPEHLRAIAAAARAGSFAVSFRASGQLSLKRLANGAPAKGHDILEKTIKPGSVQE VYGADSERRLAQIERADIDGYVGHWGRDKLLGLYMGPAANERDTPMLFGALRSTPSGHRYYPVDHDDLEGSLALLKRTQG PSGTAGSFWMSLPYTGDYDTHDMINMAGHRAPVPSGSRDEHRIMRSLNVAIEAIDPIRKASSGSHRLIQHGPQHNYVAHM RTNEQGAVIDEAVARASFPLAMCDRGTWSVIETPEALAAFYRQHGVVLKEKWREKRANTFTA >Mature_302_residues MMSHARADTSRELTPVEARIAQTFVRPEHLRAIAAAARAGSFAVSFRASGQLSLKRLANGAPAKGHDILEKTIKPGSVQE VYGADSERRLAQIERADIDGYVGHWGRDKLLGLYMGPAANERDTPMLFGALRSTPSGHRYYPVDHDDLEGSLALLKRTQG PSGTAGSFWMSLPYTGDYDTHDMINMAGHRAPVPSGSRDEHRIMRSLNVAIEAIDPIRKASSGSHRLIQHGPQHNYVAHM RTNEQGAVIDEAVARASFPLAMCDRGTWSVIETPEALAAFYRQHGVVLKEKWREKRANTFTA
Specific function: Unknown
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33248; Mature: 33248
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSHARADTSRELTPVEARIAQTFVRPEHLRAIAAAARAGSFAVSFRASGQLSLKRLANG CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCC APAKGHDILEKTIKPGSVQEVYGADSERRLAQIERADIDGYVGHWGRDKLLGLYMGPAAN CCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCCCC ERDTPMLFGALRSTPSGHRYYPVDHDDLEGSLALLKRTQGPSGTAGSFWMSLPYTGDYDT CCCCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC HDMINMAGHRAPVPSGSRDEHRIMRSLNVAIEAIDPIRKASSGSHRLIQHGPQHNYVAHM HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEE RTNEQGAVIDEAVARASFPLAMCDRGTWSVIETPEALAAFYRQHGVVLKEKWREKRANTF EECCCCCHHHHHHHHHCCCHHHHCCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHCCCC TA CC >Mature Secondary Structure MMSHARADTSRELTPVEARIAQTFVRPEHLRAIAAAARAGSFAVSFRASGQLSLKRLANG CCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCC APAKGHDILEKTIKPGSVQEVYGADSERRLAQIERADIDGYVGHWGRDKLLGLYMGPAAN CCCCCHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCCCC ERDTPMLFGALRSTPSGHRYYPVDHDDLEGSLALLKRTQGPSGTAGSFWMSLPYTGDYDT CCCCHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC HDMINMAGHRAPVPSGSRDEHRIMRSLNVAIEAIDPIRKASSGSHRLIQHGPQHNYVAHM HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEE RTNEQGAVIDEAVARASFPLAMCDRGTWSVIETPEALAAFYRQHGVVLKEKWREKRANTF EECCCCCHHHHHHHHHCCCHHHHCCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHCCCC TA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA