Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446360
Identifier: 126446360
GI number: 126446360
Start: 1781005
End: 1782138
Strand: Direct
Name: 126446360
Synonym: BMA10247_A1850
Alternate gene names: NA
Gene position: 1781005-1782138 (Clockwise)
Preceding gene: 126447242
Following gene: 126447792
Centisome position: 75.7
GC content: 63.4
Gene sequence:
>1134_bases ATGCCACTCTCCACGCTCGCGACGATGGCCGTCGCGGCCGCCATCAGCACACCGGCGGCATTCGCCGAATCCGCGCCCGT TTCCGGCAACGGGGGCATTCCTTCGTTCTATCGATGGACGGACAAGGTGCCGCAGACGCGCGGCCAGATGTTGCGCACCG AAGTGCTGACACCACGGCAAGGCCTTGCCGCTGCGGGGCAGAACCTCCGCATCCTGTATACGTCGACCGACGGAATTGAC GGCCACACGCCGATTGTCGTGTCCGGTGCGTTGTTCGTGCCGAAGGGGACGCCGCCGCAAGGCGGCTGGCCGTTGATGGC ATGGGCACACGGCACGGTCGGCAGCGCCGACATATGCGCGCCATCGTATGCGGGCCATAGCGAACGCGATGTCCGCTACC TGAGCCATTGGCTCGCGCAGGGATACGCAATTGTCGCGACCGACTACCAAGGGCTTGGTGCGTCCGGTCCCCATCCGTAC GGGCTGACTCGTCCGCTCGCGTATAGCGTACTCGACAGCATTCGCGCTGTTCAGAACGGCGGCTTCGAATTGTCGCCGAA ACGAATCGTCGTGTTCGGACAGTCGCAAGGCGGCCGGGCCGCATTTGCAACGGCCGTCTACGCAAAGTCCTATGCGCCCG AGCTGGACATCGGCGGCGTGGTGGCAACCGGCACGCCATACGCGACGATTCGCCATCGCGCGGATGATGCGGAACACTCG AAATTGCACCGCTCGGTGATCCATAACATACTGCGGCTCAACGCCACCCCGAAGCTCCTCGATCCGTCGTTCGCCACGTC CGACTATCTGACCGAACGCGCGACGCCGGCATTCGAGTTCAGCCAGCACGCGTGTCTGCACGCAATCAAGCAGAAGATCG CCTCGGACGGTCTCACGTTCGAAAATAGCTTCAAACGCTCGCCGCAACCCGTGCTCGACTGGATCAGACGCGAAGCGGCC TACCCGACGCTGAAGTCGGCAATCCCGATCTTCATCGGCACGGGCGGCAAGGATCGCAACGTGCCCGTTTCGGATCAGGC CGCGCTCGTTAAAGACGCTTGCGAAGCCGGCGACCGAATCGAGTGGCACGTCTATCCTGACCTGCCCCCTTCGATAGGGC CAATGGGCTTCTAG
Upstream 100 bases:
>100_bases CGAAATAGCGTCAGCGTCGGCATTTCGCGATCGATCCCAAAGCGCCCGTCTACCGAGACGAACTCTAGAAGAGGCATCAC TTATGTCGAGAACCGGATTC
Downstream 100 bases:
>100_bases CAAAGTCCCTTTAAACCAACTCCTGGAAAGCGGCAGGAGCGTCCGCGGTTGCCCGATGTTTCGCCGCAAACTCTGACGGC GCAAGGTAGTTCAGTGCGCT
Product: secretory lipase family protein
Products: NA
Alternate protein names: Lipase; Triacylglycerol Lipase; Secreted Protein; Exported Lipase; Secretory Lipase Family Protein; Alkaline Lipase; Alpha/Beta Hydrolase; Acetyl Esterase; Signal Peptide; Lipase Family Protein; Secretory Lipase Family; Lipoprotein
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKVPQTRGQMLRTEVLTPRQGLAAAGQNLRILYTSTDGID GHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGASGPHPY GLTRPLAYSVLDSIRAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRADDAEHS KLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTFENSFKRSPQPVLDWIRREAA YPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRIEWHVYPDLPPSIGPMGF
Sequences:
>Translated_377_residues MPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKVPQTRGQMLRTEVLTPRQGLAAAGQNLRILYTSTDGID GHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGASGPHPY GLTRPLAYSVLDSIRAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRADDAEHS KLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTFENSFKRSPQPVLDWIRREAA YPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRIEWHVYPDLPPSIGPMGF >Mature_376_residues PLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKVPQTRGQMLRTEVLTPRQGLAAAGQNLRILYTSTDGIDG HTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICAPSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGASGPHPYG LTRPLAYSVLDSIRAVQNGGFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRADDAEHSK LHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTFENSFKRSPQPVLDWIRREAAY PTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRIEWHVYPDLPPSIGPMGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40317; Mature: 40186
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKVPQTRGQMLRTEVLTPRQ CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCH GLAAAGQNLRILYTSTDGIDGHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICA HHHHCCCCEEEEEEECCCCCCCCCEEEECEEEECCCCCCCCCCCEEEEECCCCCCCCCCC PSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGASGPHPYGLTRPLAYSVLDSIRAVQNG CCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC GFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRADDAEHS CEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCHHHH KLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTF HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC ENSFKRSPQPVLDWIRREAAYPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRI CCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCE EWHVYPDLPPSIGPMGF EEEECCCCCCCCCCCCC >Mature Secondary Structure PLSTLATMAVAAAISTPAAFAESAPVSGNGGIPSFYRWTDKVPQTRGQMLRTEVLTPRQ CHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCH GLAAAGQNLRILYTSTDGIDGHTPIVVSGALFVPKGTPPQGGWPLMAWAHGTVGSADICA HHHHCCCCEEEEEEECCCCCCCCCEEEECEEEECCCCCCCCCCCEEEEECCCCCCCCCCC PSYAGHSERDVRYLSHWLAQGYAIVATDYQGLGASGPHPYGLTRPLAYSVLDSIRAVQNG CCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC GFELSPKRIVVFGQSQGGRAAFATAVYAKSYAPELDIGGVVATGTPYATIRHRADDAEHS CEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEECCCCHHHH KLHRSVIHNILRLNATPKLLDPSFATSDYLTERATPAFEFSQHACLHAIKQKIASDGLTF HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC ENSFKRSPQPVLDWIRREAAYPTLKSAIPIFIGTGGKDRNVPVSDQAALVKDACEAGDRI CCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCE EWHVYPDLPPSIGPMGF EEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA