Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is pur8 [H]
Identifier: 126447639
GI number: 126447639
Start: 1113068
End: 1114504
Strand: Direct
Name: pur8 [H]
Synonym: BMA10247_A1136
Alternate gene names: 126447639
Gene position: 1113068-1114504 (Clockwise)
Preceding gene: 126447716
Following gene: 126446301
Centisome position: 47.31
GC content: 71.61
Gene sequence:
>1437_bases ATGACATCCGAGATTTCCGGCAAACGGCGCTGGTATGCGCTCGTGGTTCTGTGTCTGGGCGTGCTGATGATCGTGCTCGA CACGACCATCGTGAACGTCGCGCTGCCGTCGATCGCGGCCGAGCTGCGTTTTTCCGAGAACGCGCTCGTCTGGGTCGTCA ACGCCTACATGCTGACGTTCGGCGGCTGCCTGCTGCTCGGCGGCAGGCTCGGCGACCTGTACGGGCACCGGCGCCTCTTC CTGGCCGGCGTGACGGTGTTCACGGCCGCGTCGCTCGCCTGCGGACTCGCGCAGACGCAGCTCATGCTGATCGCCGCGCG CGCCGCGCAGGGCATCGGCGGCGCGGTCGTCTCCTCGGTCGCGCTGTCGCTCATCATGACGCTGTTCGTCGAGCCGGGCG ACTGGGCGAAGGCGATGGGCGTCTACGGCTTCGTCTATGCGGGCGGCGGCAGCCTCGGCGTGCTGCTCGGCGGGCTCCTG ACGAGCGCGTTGAGCTGGCACTGGGTCTTTCTCGTCAACCTGCCGCTCGGCGCCGTGGTCTATCTGCTGTCGTCGGCGCT GCTGCCGAAGGCGCGCGCGCAGGCAACGCGCGCGCCGCTCGACATCGCCGGCGCCGTGACCGCCGCGCTGATGTTGGCCG TCTACGCGGTGGTGAACGGCAACGCGGCCGGCTGGCTGTCCGCGCGCACGCTGAGCTGGCTCGGCGGCGCGGCGGCGCTG TTCGCCGCGTTCGTCGCGATCGAGGCGCGCGTCGCGCATCCGCTGATGCCGCTCGCGCTCTGCATGAAGCGCAACGTCGC GATCGCGAACCTGATCGGCATCCTGTGGGCCGCCGCGATGTTCGCGTGGTTCTTCCTCGCCGCGCTGTATCTGCAGCGCG TGCTCGGCTACGGGCCGTTGCAGATCGGCCTCGCGTTCCTGCCGGCGAACCTGATCATGGGCGTGTTCTCGCTCATCGTC TCCGCGCTGCTCGTGGTGCGCTTCGGGATCCGCGTGCCGATCGCGGCCGGACTGCTCGCGGCGGCGGCCGGCCTGATGCT GTTCGCGCGGGCGCCCGTCGGCGGGGACTTCGTCGCCGACGTGCTGCCGGGCATGATCCTGCTGGGCACCGGCGCGGGCA TCGCGTTCAACCCGGTCCTGCTCGCGGCGATGAGCGGCGTCGATCCGGCGGACTCGGGGCTCGCCTCGGGCATCGTCAAC ACGTCGTTCATGATGGGCGGCGCGCTCGGCCTCGCGGTGCTCGCGAGCGTCGCGACGGCGCGCACCGATGCGCTGCTCGC CGCGCGCACGGCCGTGCCCGCCGCGATGGCGGGCGGCTACCATGCGGCGTTCATGCTCGGCGCGGCGTTCGCGATCGTCG CCGCGCTGATCGGGATGCGGCTGCGGGCCGCCCCGAATCCGGCGGCGATGCAGGGGCTGCAAGGCGCGACGCAGTAG
Upstream 100 bases:
>100_bases ACCGCGGACGTCGCGTGAGGCCGCGCCGCGCGCCGGCGCCGCGCGGCGTCGGCCGCCGCCGCCGCGTGCGCATCCCCCAT CACTTCATGGAGTTCCATCG
Downstream 100 bases:
>100_bases CGCGGTCCCGTCGCGCGGCGAGCTTGGTCGGTGTGTTCGACCGGCGAGTTCGATTGGTGTGTTCGACCGGCAAGTGTGAT CGACGAATTTGAGCGGCGAG
Product: EmrB/QacA family drug resistance transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MTSEISGKRRWYALVVLCLGVLMIVLDTTIVNVALPSIAAELRFSENALVWVVNAYMLTFGGCLLLGGRLGDLYGHRRLF LAGVTVFTAASLACGLAQTQLMLIAARAAQGIGGAVVSSVALSLIMTLFVEPGDWAKAMGVYGFVYAGGGSLGVLLGGLL TSALSWHWVFLVNLPLGAVVYLLSSALLPKARAQATRAPLDIAGAVTAALMLAVYAVVNGNAAGWLSARTLSWLGGAAAL FAAFVAIEARVAHPLMPLALCMKRNVAIANLIGILWAAAMFAWFFLAALYLQRVLGYGPLQIGLAFLPANLIMGVFSLIV SALLVVRFGIRVPIAAGLLAAAAGLMLFARAPVGGDFVADVLPGMILLGTGAGIAFNPVLLAAMSGVDPADSGLASGIVN TSFMMGGALGLAVLASVATARTDALLAARTAVPAAMAGGYHAAFMLGAAFAIVAALIGMRLRAAPNPAAMQGLQGATQ
Sequences:
>Translated_478_residues MTSEISGKRRWYALVVLCLGVLMIVLDTTIVNVALPSIAAELRFSENALVWVVNAYMLTFGGCLLLGGRLGDLYGHRRLF LAGVTVFTAASLACGLAQTQLMLIAARAAQGIGGAVVSSVALSLIMTLFVEPGDWAKAMGVYGFVYAGGGSLGVLLGGLL TSALSWHWVFLVNLPLGAVVYLLSSALLPKARAQATRAPLDIAGAVTAALMLAVYAVVNGNAAGWLSARTLSWLGGAAAL FAAFVAIEARVAHPLMPLALCMKRNVAIANLIGILWAAAMFAWFFLAALYLQRVLGYGPLQIGLAFLPANLIMGVFSLIV SALLVVRFGIRVPIAAGLLAAAAGLMLFARAPVGGDFVADVLPGMILLGTGAGIAFNPVLLAAMSGVDPADSGLASGIVN TSFMMGGALGLAVLASVATARTDALLAARTAVPAAMAGGYHAAFMLGAAFAIVAALIGMRLRAAPNPAAMQGLQGATQ >Mature_477_residues TSEISGKRRWYALVVLCLGVLMIVLDTTIVNVALPSIAAELRFSENALVWVVNAYMLTFGGCLLLGGRLGDLYGHRRLFL AGVTVFTAASLACGLAQTQLMLIAARAAQGIGGAVVSSVALSLIMTLFVEPGDWAKAMGVYGFVYAGGGSLGVLLGGLLT SALSWHWVFLVNLPLGAVVYLLSSALLPKARAQATRAPLDIAGAVTAALMLAVYAVVNGNAAGWLSARTLSWLGGAAALF AAFVAIEARVAHPLMPLALCMKRNVAIANLIGILWAAAMFAWFFLAALYLQRVLGYGPLQIGLAFLPANLIMGVFSLIVS ALLVVRFGIRVPIAAGLLAAAAGLMLFARAPVGGDFVADVLPGMILLGTGAGIAFNPVLLAAMSGVDPADSGLASGIVNT SFMMGGALGLAVLASVATARTDALLAARTAVPAAMAGGYHAAFMLGAAFAIVAALIGMRLRAAPNPAAMQGLQGATQ
Specific function: May be involved in active puromycin efflux energized by a proton-dependent electrochemical gradient. In addition, it could be implicated in secreting N-acetylpuromycin, the last intermediate of the puromycin biosynthesis pathway, to the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=416, Percent_Identity=30.0480769230769, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1789042, Length=423, Percent_Identity=26.4775413711584, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788392, Length=358, Percent_Identity=30.7262569832402, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788710, Length=420, Percent_Identity=25.7142857142857, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790195, Length=255, Percent_Identity=31.7647058823529, Blast_Score=99, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6324954, Length=391, Percent_Identity=25.5754475703325, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323520, Length=462, Percent_Identity=25.5411255411255, Blast_Score=77, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6321663, Length=152, Percent_Identity=30.9210526315789, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6325455, Length=133, Percent_Identity=30.0751879699248, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48839; Mature: 48708
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEISGKRRWYALVVLCLGVLMIVLDTTIVNVALPSIAAELRFSENALVWVVNAYMLTF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHH GGCLLLGGRLGDLYGHRRLFLAGVTVFTAASLACGLAQTQLMLIAARAAQGIGGAVVSSV CHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALSLIMTLFVEPGDWAKAMGVYGFVYAGGGSLGVLLGGLLTSALSWHWVFLVNLPLGAVV HHHHHHHHHCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHH YLLSSALLPKARAQATRAPLDIAGAVTAALMLAVYAVVNGNAAGWLSARTLSWLGGAAAL HHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FAAFVAIEARVAHPLMPLALCMKRNVAIANLIGILWAAAMFAWFFLAALYLQRVLGYGPL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QIGLAFLPANLIMGVFSLIVSALLVVRFGIRVPIAAGLLAAAAGLMLFARAPVGGDFVAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VLPGMILLGTGAGIAFNPVLLAAMSGVDPADSGLASGIVNTSFMMGGALGLAVLASVATA HHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDALLAARTAVPAAMAGGYHAAFMLGAAFAIVAALIGMRLRAAPNPAAMQGLQGATQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC >Mature Secondary Structure TSEISGKRRWYALVVLCLGVLMIVLDTTIVNVALPSIAAELRFSENALVWVVNAYMLTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHH GGCLLLGGRLGDLYGHRRLFLAGVTVFTAASLACGLAQTQLMLIAARAAQGIGGAVVSSV CHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ALSLIMTLFVEPGDWAKAMGVYGFVYAGGGSLGVLLGGLLTSALSWHWVFLVNLPLGAVV HHHHHHHHHCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHH YLLSSALLPKARAQATRAPLDIAGAVTAALMLAVYAVVNGNAAGWLSARTLSWLGGAAAL HHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH FAAFVAIEARVAHPLMPLALCMKRNVAIANLIGILWAAAMFAWFFLAALYLQRVLGYGPL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QIGLAFLPANLIMGVFSLIVSALLVVRFGIRVPIAAGLLAAAAGLMLFARAPVGGDFVAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH VLPGMILLGTGAGIAFNPVLLAAMSGVDPADSGLASGIVNTSFMMGGALGLAVLASVATA HHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDALLAARTAVPAAMAGGYHAAFMLGAAFAIVAALIGMRLRAAPNPAAMQGLQGATQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7916693 [H]