Click here to switch to the map view.

The map label for this gene is prnC

Identifier: 126447716

GI number: 126447716

Start: 1111327

End: 1112985

Strand: Direct

Name: prnC

Synonym: BMA10247_A1135

Alternate gene names: NA

Gene position: 1111327-1112985 (Clockwise)

Preceding gene: 126447945

Following gene: 126447639

Centisome position: 47.24

GC content: 66.79

Gene sequence:

>1659_bases
ATGAGCAACAATCAGGTCAGGAAATACGACGTCGTCATCATCGGGACGGGCATCGGCGGCACGACGCTCGGCGCGATCCT
CGCGCGGCACGGGCTGCGGGTCGCGATGATCGATTCCGGCACGCATCCGCGCTTTGCCGTCGGCGAATCGACGATCGCCA
CGACCACGCTGACGCTCGAGCTGATGGCGATGCGCTTCGACGTGCCGGAGCTCAAGCACATCACGTCGATCGCCGAAGTG
AGCGAGAACGTGATGCCGTCGTGCGGCGTGAAGCGCAACTTCGGCTTCGTGTATCACCGCGAGCACACCGAGCAGAATCC
GCAGGAGGTCAATCAGGCGCTCGTCGTCAACGAGGTGCACTATTTCCGGCAGGACATCGACGCGTACATGCTGCACGTGG
CCATTCGCTACGGCTGCGACGCGTATCAGAACACCGTCGTCGACGATATCCGGATCGACGCCGGCGGCGTGACGGTGACG
ACGCGCGGCGGCCTCACGTTCGAGGCGGATTTCGTCGCCGACGGCGCGGGGTACCGCTCGGTGCTGGCCGACAAGCTCGG
CCTGCGCGAGACGCCGTGCCGCGCGAAGACGCATGCGCGCGGCCTGTTCACGCACATGATCGGCGTGAAGCCGTTCGACG
CCTGCCGCGAGGTGCCCAAGGCGCTGCAGCAGCCGGTGCCGTGGCATCAGGGGACGCTGCACCACCTGTTCGACGGCGGC
TGGATGTGGGTGATTCCGTTCAACAACACGCCGGAATCGAAGAACCCGCTCGTGAGCGTCGGCCTGATGCTCGATCCGCG
CAAGCATCCGAAGCCGGACGTGCGGCCCGAGCAGGAATTCGCCGATTTCATCGCGAAGCATCCGGACATGGCGCGGCAGT
TCGCCGATGCGCGCGCGGTGCGCGAATGGGTGTCCTCGGGCCGCATCCAGTACAGCGCGAGCGCATGCACGGGCGACCGG
TTCTGCCTGCTCTCGCATGCGACGGGCTTCATCGATCCGCTGTTCTCGCGCGGCCTGTTCAACACGATGCAGACGACCAA
CGCGCTCGCGGGGCTGCTGATCGAAGCCGCAAAGGACCGCGATTTCAGCAAGGCGCGCTTCGCGCCGGTCGAGAAGCTCC
AGCAGGGCCTGATCGATTTCAACGATCGGCTCGTCAACTGCTCGTACCTCTCGTGGGGCCACTATCCGCTCTGGAACGCG
TGGTTCCGCCTGTGGCTGCTCACCGGCAACTACGGCCAGCTTCACCTGCAGCGCGTGATGATGAAGTACCGGCAAACCGG
CGACGCGCGCTGGCTCGAGCCGGCCGACGCGCTGTTGCCGGGCGCGTTCACCACGCTCGAGCCGATCATGCGGCTGTTCG
AGGCGGCGGCGGTGTGCGTCGAGCGGTACGGCGCAGGCGAGCTCTCGGGCGAGGCGGCCGAGCGGGCGATCTACGCGCTG
CTCGAGGAGAACGCCGCGCTGCTGCCGCCGTTCTTCGATTTCGTTTCGCCCGCCGAGCGGATCACCTGGCCGAGCACGCC
CGAGAAGATCGCCGCGCTGCTGCTCGAGTGGGTCGAGCGGCTGCCCGAGGACGTGCGGGCGGAATACTTCGACTACGACG
TGCGGGCGCTGCTCCAGCAGCCGGTCGTCAAGGACACGATCACCGCGGACGTCGCGTGA

Upstream 100 bases:

>100_bases
TCGGCGCGGCCCGATTGACGGGCCGCGTGCCGACAGGTTGCCCGCCGGATTTCCCGACGGGTTCATTGACGAAGATTCGA
CAACAGGCTGGAGAAATACG

Downstream 100 bases:

>100_bases
GGCCGCGCCGCGCGCCGGCGCCGCGCGGCGTCGGCCGCCGCCGCCGCGTGCGCATCCCCCATCACTTCATGGAGTTCCAT
CGATGACATCCGAGATTTCC

Product: halogenase PrnC

Products: NA

Alternate protein names: Halogenase; Oxidoreductase; Halogenase B; Dehydrogenase; Tryptophan Halogenase; Alkylhalidase PltM; Oxidoreductase Protein; Alkylhalidase PltA; Halogenase-Like Protein PltD; Halogenase A

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSNNQVRKYDVVIIGTGIGGTTLGAILARHGLRVAMIDSGTHPRFAVGESTIATTTLTLELMAMRFDVPELKHITSIAEV
SENVMPSCGVKRNFGFVYHREHTEQNPQEVNQALVVNEVHYFRQDIDAYMLHVAIRYGCDAYQNTVVDDIRIDAGGVTVT
TRGGLTFEADFVADGAGYRSVLADKLGLRETPCRAKTHARGLFTHMIGVKPFDACREVPKALQQPVPWHQGTLHHLFDGG
WMWVIPFNNTPESKNPLVSVGLMLDPRKHPKPDVRPEQEFADFIAKHPDMARQFADARAVREWVSSGRIQYSASACTGDR
FCLLSHATGFIDPLFSRGLFNTMQTTNALAGLLIEAAKDRDFSKARFAPVEKLQQGLIDFNDRLVNCSYLSWGHYPLWNA
WFRLWLLTGNYGQLHLQRVMMKYRQTGDARWLEPADALLPGAFTTLEPIMRLFEAAAVCVERYGAGELSGEAAERAIYAL
LEENAALLPPFFDFVSPAERITWPSTPEKIAALLLEWVERLPEDVRAEYFDYDVRALLQQPVVKDTITADVA

Sequences:

>Translated_552_residues
MSNNQVRKYDVVIIGTGIGGTTLGAILARHGLRVAMIDSGTHPRFAVGESTIATTTLTLELMAMRFDVPELKHITSIAEV
SENVMPSCGVKRNFGFVYHREHTEQNPQEVNQALVVNEVHYFRQDIDAYMLHVAIRYGCDAYQNTVVDDIRIDAGGVTVT
TRGGLTFEADFVADGAGYRSVLADKLGLRETPCRAKTHARGLFTHMIGVKPFDACREVPKALQQPVPWHQGTLHHLFDGG
WMWVIPFNNTPESKNPLVSVGLMLDPRKHPKPDVRPEQEFADFIAKHPDMARQFADARAVREWVSSGRIQYSASACTGDR
FCLLSHATGFIDPLFSRGLFNTMQTTNALAGLLIEAAKDRDFSKARFAPVEKLQQGLIDFNDRLVNCSYLSWGHYPLWNA
WFRLWLLTGNYGQLHLQRVMMKYRQTGDARWLEPADALLPGAFTTLEPIMRLFEAAAVCVERYGAGELSGEAAERAIYAL
LEENAALLPPFFDFVSPAERITWPSTPEKIAALLLEWVERLPEDVRAEYFDYDVRALLQQPVVKDTITADVA
>Mature_551_residues
SNNQVRKYDVVIIGTGIGGTTLGAILARHGLRVAMIDSGTHPRFAVGESTIATTTLTLELMAMRFDVPELKHITSIAEVS
ENVMPSCGVKRNFGFVYHREHTEQNPQEVNQALVVNEVHYFRQDIDAYMLHVAIRYGCDAYQNTVVDDIRIDAGGVTVTT
RGGLTFEADFVADGAGYRSVLADKLGLRETPCRAKTHARGLFTHMIGVKPFDACREVPKALQQPVPWHQGTLHHLFDGGW
MWVIPFNNTPESKNPLVSVGLMLDPRKHPKPDVRPEQEFADFIAKHPDMARQFADARAVREWVSSGRIQYSASACTGDRF
CLLSHATGFIDPLFSRGLFNTMQTTNALAGLLIEAAKDRDFSKARFAPVEKLQQGLIDFNDRLVNCSYLSWGHYPLWNAW
FRLWLLTGNYGQLHLQRVMMKYRQTGDARWLEPADALLPGAFTTLEPIMRLFEAAAVCVERYGAGELSGEAAERAIYALL
EENAALLPPFFDFVSPAERITWPSTPEKIAALLLEWVERLPEDVRAEYFDYDVRALLQQPVVKDTITADVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61857; Mature: 61726

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNQVRKYDVVIIGTGIGGTTLGAILARHGLRVAMIDSGTHPRFAVGESTIATTTLTLE
CCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECCCHHHHHHHHHH
LMAMRFDVPELKHITSIAEVSENVMPSCGVKRNFGFVYHREHTEQNPQEVNQALVVNEVH
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
YFRQDIDAYMLHVAIRYGCDAYQNTVVDDIRIDAGGVTVTTRGGLTFEADFVADGAGYRS
HHHHHHHHHHHHHHHHHCCHHHHCCCHHHEEECCCCEEEEECCCEEEEEEEEECCCCHHH
VLADKLGLRETPCRAKTHARGLFTHMIGVKPFDACREVPKALQQPVPWHQGTLHHLFDGG
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
WMWVIPFNNTPESKNPLVSVGLMLDPRKHPKPDVRPEQEFADFIAKHPDMARQFADARAV
EEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
REWVSSGRIQYSASACTGDRFCLLSHATGFIDPLFSRGLFNTMQTTNALAGLLIEAAKDR
HHHHHCCCEEEEECCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DFSKARFAPVEKLQQGLIDFNDRLVNCSYLSWGHYPLWNAWFRLWLLTGNYGQLHLQRVM
CCCHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHEEECCCCHHHHHHHH
MKYRQTGDARWLEPADALLPGAFTTLEPIMRLFEAAAVCVERYGAGELSGEAAERAIYAL
HHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LEENAALLPPFFDFVSPAERITWPSTPEKIAALLLEWVERLPEDVRAEYFDYDVRALLQQ
HHCCCCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
PVVKDTITADVA
CHHHHHHHCCCC
>Mature Secondary Structure 
SNNQVRKYDVVIIGTGIGGTTLGAILARHGLRVAMIDSGTHPRFAVGESTIATTTLTLE
CCCCEEEEEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCEEECCCHHHHHHHHHH
LMAMRFDVPELKHITSIAEVSENVMPSCGVKRNFGFVYHREHTEQNPQEVNQALVVNEVH
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
YFRQDIDAYMLHVAIRYGCDAYQNTVVDDIRIDAGGVTVTTRGGLTFEADFVADGAGYRS
HHHHHHHHHHHHHHHHHCCHHHHCCCHHHEEECCCCEEEEECCCEEEEEEEEECCCCHHH
VLADKLGLRETPCRAKTHARGLFTHMIGVKPFDACREVPKALQQPVPWHQGTLHHLFDGG
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
WMWVIPFNNTPESKNPLVSVGLMLDPRKHPKPDVRPEQEFADFIAKHPDMARQFADARAV
EEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
REWVSSGRIQYSASACTGDRFCLLSHATGFIDPLFSRGLFNTMQTTNALAGLLIEAAKDR
HHHHHCCCEEEEECCCCCCCEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DFSKARFAPVEKLQQGLIDFNDRLVNCSYLSWGHYPLWNAWFRLWLLTGNYGQLHLQRVM
CCCHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHEEECCCCHHHHHHHH
MKYRQTGDARWLEPADALLPGAFTTLEPIMRLFEAAAVCVERYGAGELSGEAAERAIYAL
HHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LEENAALLPPFFDFVSPAERITWPSTPEKIAALLLEWVERLPEDVRAEYFDYDVRALLQQ
HHCCCCCCCHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
PVVKDTITADVA
CHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA