Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447618
Identifier: 126447618
GI number: 126447618
Start: 1970192
End: 1971214
Strand: Reverse
Name: 126447618
Synonym: BMA10247_A2035
Alternate gene names: NA
Gene position: 1971214-1970192 (Counterclockwise)
Preceding gene: 262192892
Following gene: 126446263
Centisome position: 83.79
GC content: 72.63
Gene sequence:
>1023_bases ATGGGGATGACGACGCGGCCGCAGGCGAACGCGAAGGCGCGCGCGCGCAAGGCGGCCGCGCGCGGGGAGCCGGCGCGCGG CGCGCTGCTGCGCGTCACGCATGATACGCGCTATCGATACGCGGCGCGCGTCGAATCCGCGCAGCATCAGGCGCGTCTGC GCCCGCTCGAGACGCCGCGGCAGCGCGTGATCGAGTTCTCGCTCGAGATCGAGCCGCGCGCGGAAGGGCTCGTCGTCGAC ATCGATTCGTTCGGCAACGAGCGCGCTTCGTTCGCGCTCAACCAGCCGCACGAGGAGCTGTTCGTGCGCAGCCGCAGCGT CGTGCGCGTCACGCCGCCCGCGCTGGCGGCGGGCAAGCGCGGCGAGCCGCCGCCCGCCGTCGCCGCGCCGCGCGACGGCT GCGCGAGCGCGTGGGAAGCGGTGCGTGAGCGCCTGACGTTTCGTGCCGGCCGCCCGTTCGATCCGGCGAGCGAATTCGTG TTCGCTTCGCCGCACGTCGCATGCCACTCCGATCTCGCCGCCTATGCGGCGGCGAGCTTCACGCCGGGCCGGCCGCTCGT GCAGGCCGCGTGGGAGCTGATGCGCCGCATCCACGCGGATTTCGCGTATGCGCCGAACAGCACCGACGTCGGCACGACCG TGCTCGATGCGCTCGCGCTGCGCCAGGGCGTGTGCCAGGATTTCGCGCACGTGATGATCGGCGCGCTGCGCTCGCTCGGG CTTGCCGCGCGCTACGTGAGCGGCTATCTGCTGACGCAGCCGCCGCCCGGGCAGCCGCGATTGATCGGCGCGGACGCATC GCATGCGTGGGTCGAGGTCTACGATCCCGCGTGGCCCGAGGACGGTGGCTGGCTGCCGCTCGATCCGACCAACGATCGCG CGCCCGGCGACGATTACGTGATGTTGTCGATCGGCCGCGACTACGCGGACGTGACGCCGTTGCGCGGCGTCATTCGCGGC GGCGGGGCCGATCAGGTGCTGACGGTCGGCGTGACGGTGGAGCCGCTCGATTCGGCGTCCTGA
Upstream 100 bases:
>100_bases TGCTCGCGCGCCTGCAAGCGTGCGGCAAGGCGGCGTGGGACGTGTCGAACCGGATCGGCGAGCGCTATTTCAGCCACGTG CGCGATGCGGGCAGGTCGCT
Downstream 100 bases:
>100_bases CTGTTCGAGGACGGCGCGCGGCCGTTGCGCATGTCGCGCCGGATATTGCGCGTGGGGGCGAGACGAGATGTCGCTCGATG CGAGCGATGAGTGATCGTTG
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MGMTTRPQANAKARARKAAARGEPARGALLRVTHDTRYRYAARVESAQHQARLRPLETPRQRVIEFSLEIEPRAEGLVVD IDSFGNERASFALNQPHEELFVRSRSVVRVTPPALAAGKRGEPPPAVAAPRDGCASAWEAVRERLTFRAGRPFDPASEFV FASPHVACHSDLAAYAAASFTPGRPLVQAAWELMRRIHADFAYAPNSTDVGTTVLDALALRQGVCQDFAHVMIGALRSLG LAARYVSGYLLTQPPPGQPRLIGADASHAWVEVYDPAWPEDGGWLPLDPTNDRAPGDDYVMLSIGRDYADVTPLRGVIRG GGADQVLTVGVTVEPLDSAS
Sequences:
>Translated_340_residues MGMTTRPQANAKARARKAAARGEPARGALLRVTHDTRYRYAARVESAQHQARLRPLETPRQRVIEFSLEIEPRAEGLVVD IDSFGNERASFALNQPHEELFVRSRSVVRVTPPALAAGKRGEPPPAVAAPRDGCASAWEAVRERLTFRAGRPFDPASEFV FASPHVACHSDLAAYAAASFTPGRPLVQAAWELMRRIHADFAYAPNSTDVGTTVLDALALRQGVCQDFAHVMIGALRSLG LAARYVSGYLLTQPPPGQPRLIGADASHAWVEVYDPAWPEDGGWLPLDPTNDRAPGDDYVMLSIGRDYADVTPLRGVIRG GGADQVLTVGVTVEPLDSAS >Mature_339_residues GMTTRPQANAKARARKAAARGEPARGALLRVTHDTRYRYAARVESAQHQARLRPLETPRQRVIEFSLEIEPRAEGLVVDI DSFGNERASFALNQPHEELFVRSRSVVRVTPPALAAGKRGEPPPAVAAPRDGCASAWEAVRERLTFRAGRPFDPASEFVF ASPHVACHSDLAAYAAASFTPGRPLVQAAWELMRRIHADFAYAPNSTDVGTTVLDALALRQGVCQDFAHVMIGALRSLGL AARYVSGYLLTQPPPGQPRLIGADASHAWVEVYDPAWPEDGGWLPLDPTNDRAPGDDYVMLSIGRDYADVTPLRGVIRGG GADQVLTVGVTVEPLDSAS
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML0607 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 36773; Mature: 36642
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMTTRPQANAKARARKAAARGEPARGALLRVTHDTRYRYAARVESAQHQARLRPLETPR CCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHH QRVIEFSLEIEPRAEGLVVDIDSFGNERASFALNQPHEELFVRSRSVVRVTPPALAAGKR HHHEEEEEEECCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHCCCEEEECCCHHHCCCC GEPPPAVAAPRDGCASAWEAVRERLTFRAGRPFDPASEFVFASPHVACHSDLAAYAAASF CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCEEECCCCHHHHHHHHHHHHHCC TPGRPLVQAAWELMRRIHADFAYAPNSTDVGTTVLDALALRQGVCQDFAHVMIGALRSLG CCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAARYVSGYLLTQPPPGQPRLIGADASHAWVEVYDPAWPEDGGWLPLDPTNDRAPGDDYV HHHHHHCCEEEECCCCCCCEEEECCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCEE MLSIGRDYADVTPLRGVIRGGGADQVLTVGVTVEPLDSAS EEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure GMTTRPQANAKARARKAAARGEPARGALLRVTHDTRYRYAARVESAQHQARLRPLETPR CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHH QRVIEFSLEIEPRAEGLVVDIDSFGNERASFALNQPHEELFVRSRSVVRVTPPALAAGKR HHHEEEEEEECCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHCCCEEEECCCHHHCCCC GEPPPAVAAPRDGCASAWEAVRERLTFRAGRPFDPASEFVFASPHVACHSDLAAYAAASF CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCEEECCCCHHHHHHHHHHHHHCC TPGRPLVQAAWELMRRIHADFAYAPNSTDVGTTVLDALALRQGVCQDFAHVMIGALRSLG CCCCHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAARYVSGYLLTQPPPGQPRLIGADASHAWVEVYDPAWPEDGGWLPLDPTNDRAPGDDYV HHHHHHCCEEEECCCCCCCEEEECCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCEE MLSIGRDYADVTPLRGVIRGGGADQVLTVGVTVEPLDSAS EEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]