Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is yvyE [H]
Identifier: 126447473
GI number: 126447473
Start: 1278786
End: 1279697
Strand: Direct
Name: yvyE [H]
Synonym: BMA10247_A1307
Alternate gene names: 126447473
Gene position: 1278786-1279697 (Clockwise)
Preceding gene: 126446895
Following gene: 126446326
Centisome position: 54.35
GC content: 70.18
Gene sequence:
>912_bases TTGGACCCTTGGTCCATTGCTCGCCGCGCCGCTTCCGCCGCCGCGCATCCGGCAGCGTGCGCCGGCCGGAAAAACGGCGG CCACGCAACGTGCGGCGTCGCGCGAAGCGGCAAAAGCGCGCGGCGCCGTCGGGATCGCATTCGGACGGCGCCGGAATGCC GCGATGCGCGCCACGGTAAAATCTACTTTCTTCGCCCCACTCGCCCACGCACGCATCGCGCAGGCGAGCGGCGCCCCGAT GAGCCGACACCCGCCGACACCCGACAAAAGCGAAAAACGCCGCGCGCATTTGATTTCCTGATCCCTTTCGCCACCCGGAA CATGACCTACACGCTCGCCGCCACCTACACGCGCGAACTCGACATCCGCAAGAGCCGCTTCATCGCATACGCGATCCCCG TCGAGGACCGCGACGCGGCGATGGCCGAATTGCAGCGGCTGCGCGCCGAGCATCCGGGCGCGACGCACGTCTGCTGGGCG CTGCTCGCGGGCGGCCAGTCCGGGATGTCCGACGACGGCGAGCCGTCCGGCACCGCCGGCCGGCCGATTCTCGAAGTGCT GCGCCATCACGACCTGGACGGCGTGCTGGGCGCCGTCGTGCGCTACTTCGGCGGCGTGAAGCTCGGCGCGGGCGGCCTCG TGCGCGCGTACACCGATGCGATCGCCGCCGCGCTGATCGATGCCGAGCGCGTCGAGCGGATCGCGTACGCGCGGCTTGCG ATCGAGATCGGCTATCCGGACGAGGCACGCGTGCGCCGCTGGATCGAGCAGGAAGGCCACGCGCTCGTCGACAGCGCGTA CGCAATGACGGTCAAGCTCGTGATCCGGCTGCCCGCCGCTGCGGCCGACGCCGCGCGCGACACGCTGTTCGACCTGACGC AAGGGCGCGCCGGATTTCCTTCAGTCGATTGA
Upstream 100 bases:
>100_bases TGAACGCCGTCGTAACGGAGCCGCCCCTGCTGGACGGAAGGCATGGCTTTCGCGATTGACGGCGGCCGACATGGACGCGG CCCCTTGGACCCTTGGACCC
Downstream 100 bases:
>100_bases CCCGCGGCGCGGCGCGTGCGAGCCCAAACGGCGAATCGCGGCCCGCCGCCGCACAAAACGGATGACCGCCGGCCCCGCGT TGCGCTATCGTGGCGTCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MDPWSIARRAASAAAHPAACAGRKNGGHATCGVARSGKSARRRRDRIRTAPECRDARHGKIYFLRPTRPRTHRAGERRPD EPTPADTRQKRKTPRAFDFLIPFATRNMTYTLAATYTRELDIRKSRFIAYAIPVEDRDAAMAELQRLRAEHPGATHVCWA LLAGGQSGMSDDGEPSGTAGRPILEVLRHHDLDGVLGAVVRYFGGVKLGAGGLVRAYTDAIAAALIDAERVERIAYARLA IEIGYPDEARVRRWIEQEGHALVDSAYAMTVKLVIRLPAAAADAARDTLFDLTQGRAGFPSVD
Sequences:
>Translated_303_residues MDPWSIARRAASAAAHPAACAGRKNGGHATCGVARSGKSARRRRDRIRTAPECRDARHGKIYFLRPTRPRTHRAGERRPD EPTPADTRQKRKTPRAFDFLIPFATRNMTYTLAATYTRELDIRKSRFIAYAIPVEDRDAAMAELQRLRAEHPGATHVCWA LLAGGQSGMSDDGEPSGTAGRPILEVLRHHDLDGVLGAVVRYFGGVKLGAGGLVRAYTDAIAAALIDAERVERIAYARLA IEIGYPDEARVRRWIEQEGHALVDSAYAMTVKLVIRLPAAAADAARDTLFDLTQGRAGFPSVD >Mature_303_residues MDPWSIARRAASAAAHPAACAGRKNGGHATCGVARSGKSARRRRDRIRTAPECRDARHGKIYFLRPTRPRTHRAGERRPD EPTPADTRQKRKTPRAFDFLIPFATRNMTYTLAATYTRELDIRKSRFIAYAIPVEDRDAAMAELQRLRAEHPGATHVCWA LLAGGQSGMSDDGEPSGTAGRPILEVLRHHDLDGVLGAVVRYFGGVKLGAGGLVRAYTDAIAAALIDAERVERIAYARLA IEIGYPDEARVRRWIEQEGHALVDSAYAMTVKLVIRLPAAAADAARDTLFDLTQGRAGFPSVD
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=196, Percent_Identity=34.1836734693878, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 33202; Mature: 33202
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPWSIARRAASAAAHPAACAGRKNGGHATCGVARSGKSARRRRDRIRTAPECRDARHGK CCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCE IYFLRPTRPRTHRAGERRPDEPTPADTRQKRKTPRAFDFLIPFATRNMTYTLAATYTREL EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEEEEHHHH DIRKSRFIAYAIPVEDRDAAMAELQRLRAEHPGATHVCWALLAGGQSGMSDDGEPSGTAG HCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC RPILEVLRHHDLDGVLGAVVRYFGGVKLGAGGLVRAYTDAIAAALIDAERVERIAYARLA HHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE IEIGYPDEARVRRWIEQEGHALVDSAYAMTVKLVIRLPAAAADAARDTLFDLTQGRAGFP EEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC SVD CCC >Mature Secondary Structure MDPWSIARRAASAAAHPAACAGRKNGGHATCGVARSGKSARRRRDRIRTAPECRDARHGK CCHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCE IYFLRPTRPRTHRAGERRPDEPTPADTRQKRKTPRAFDFLIPFATRNMTYTLAATYTREL EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEEEEHHHH DIRKSRFIAYAIPVEDRDAAMAELQRLRAEHPGATHVCWALLAGGQSGMSDDGEPSGTAG HCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC RPILEVLRHHDLDGVLGAVVRYFGGVKLGAGGLVRAYTDAIAAALIDAERVERIAYARLA HHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE IEIGYPDEARVRRWIEQEGHALVDSAYAMTVKLVIRLPAAAADAARDTLFDLTQGRAGFP EEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC SVD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]