Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446326
Identifier: 126446326
GI number: 126446326
Start: 1279833
End: 1280903
Strand: Direct
Name: 126446326
Synonym: BMA10247_A1308
Alternate gene names: NA
Gene position: 1279833-1280903 (Clockwise)
Preceding gene: 126447473
Following gene: 126446574
Centisome position: 54.4
GC content: 73.48
Gene sequence:
>1071_bases ATGTCCGCCCGCACGAACGCAGCTTTCACCGCCCTCCTCGCCGCCGCGCTGTTCGGCGCCACCACGCCGCTCGCGAAGAC GCTGCTCGGCTCGCTCACGCCGTTCATGGTCGCGGGCCTGTTCTATCTCGGCAGCGGCGTCGGCCTCGGGGCGTTCATGC TGATGCGCCGGCTCGCGCGCGGCGCCGGCGCCGGCGCATCGCCCGCCGGCCACGCGCGGCTGCCGCTTGCCGAGCTTCCG TGGCTCGCGGGCGCGGTCGCGGCGGGCGGCGTCGCGGGCCCGGCGCTGCTGATGCTCGGCCTCGCGACGACGCCCGCCGC GACGAGCGCGCTGCTGCTCAATCTCGAAGGCGTGTTCACCGCGCTGATCGCGTGGGCCGTGTTCCGCGAGAACGTGGATG CGCAGATTTTCGCCGGCATGGCCGCGATCGTCGCGGGCGGCGTGCTGCTGTCGTGGCATCCGGGCGCGGCGGGCGTGCCG CTCGGCGCGCTGCTCGTCGCGGCCGCCTGCGCGTGCCGGGCGATCGACAACAACCTGACGCGCAAGGTCTCGACTCACGA CGCCGCGGCGATCGCGTGCGTCAAGGGCCTCGTCGCCGGCACGGTCAACCTCGGCATCGCGCTCGCGCTCGGCGCGCGGC TGCCCGCGGCCGCCGACAGCGCGGCCGCGATGCTCACGGGCTTCGCCGGCTATGGCGTGAGCCTCGTGCTGTTCGTCGTC GCGCTGCGCAATCTCGGCACCGCGCGGACCGGCGCGTATTTCTCGGTCGCGCCGCTGTTCGGCGTCGGGCTGTCGCTCGC GCTGTGGCCCGAATGGCCGCCGCTGTCGTTCTGGGCCGCCGCGGCGCTGATGGCGCTCGGCATCTGGCTGCACCTGCGCG AGCGCCACGAGCATCCGCATACGCACGAGGCGCTCGAGCACAGCCATCGGCACCGGCACGACACGCATCATCAGCACGCG CACGACTTCGACTGGGACGGCACGGAGCCGCACACGCACGCGCACCGGCACACGCCGATCACGCACACGCATGCGCATTT CCCGGACATTCATCACCGGCACTCGCACTGA
Upstream 100 bases:
>100_bases TCGCGGCCCGCCGCCGCACAAAACGGATGACCGCCGGCCCCGCGTTGCGCTATCGTGGCGTCACTTCTCCACGTCGATCC GCGCCGCCCGCGCCATGCCC
Downstream 100 bases:
>100_bases GCGCCGGGCGCGACGCATCCCGCCCGGCGCGTCCCGCGCGACACCGACGGGCCGCCGTTCCCGCGACGGCGCCCCCACGT CGCGGCGTCGCGGCGTCGCG
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLARGAGAGASPAGHARLPLAELP WLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFTALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVP LGALLVAAACACRAIDNNLTRKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPHTHEALEHSHRHRHDTHHQHA HDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH
Sequences:
>Translated_356_residues MSARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLARGAGAGASPAGHARLPLAELP WLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFTALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVP LGALLVAAACACRAIDNNLTRKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPHTHEALEHSHRHRHDTHHQHA HDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH >Mature_355_residues SARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLARGAGAGASPAGHARLPLAELPW LAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFTALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVPL GALLVAAACACRAIDNNLTRKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVVA LRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPHTHEALEHSHRHRHDTHHQHAH DFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 36966; Mature: 36835
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLAR CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GAGAGASPAGHARLPLAELPWLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFT CCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVPLGALLVAAACACRAIDNNLT HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH RKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPH HHHHCCCCCCCCCEEHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC THEALEHSHRHRHDTHHQHAHDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLAR CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GAGAGASPAGHARLPLAELPWLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFT CCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVPLGALLVAAACACRAIDNNLT HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH RKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPH HHHHCCCCCCCCCEEHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC THEALEHSHRHRHDTHHQHAHDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]