Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is 126446326

Identifier: 126446326

GI number: 126446326

Start: 1279833

End: 1280903

Strand: Direct

Name: 126446326

Synonym: BMA10247_A1308

Alternate gene names: NA

Gene position: 1279833-1280903 (Clockwise)

Preceding gene: 126447473

Following gene: 126446574

Centisome position: 54.4

GC content: 73.48

Gene sequence:

>1071_bases
ATGTCCGCCCGCACGAACGCAGCTTTCACCGCCCTCCTCGCCGCCGCGCTGTTCGGCGCCACCACGCCGCTCGCGAAGAC
GCTGCTCGGCTCGCTCACGCCGTTCATGGTCGCGGGCCTGTTCTATCTCGGCAGCGGCGTCGGCCTCGGGGCGTTCATGC
TGATGCGCCGGCTCGCGCGCGGCGCCGGCGCCGGCGCATCGCCCGCCGGCCACGCGCGGCTGCCGCTTGCCGAGCTTCCG
TGGCTCGCGGGCGCGGTCGCGGCGGGCGGCGTCGCGGGCCCGGCGCTGCTGATGCTCGGCCTCGCGACGACGCCCGCCGC
GACGAGCGCGCTGCTGCTCAATCTCGAAGGCGTGTTCACCGCGCTGATCGCGTGGGCCGTGTTCCGCGAGAACGTGGATG
CGCAGATTTTCGCCGGCATGGCCGCGATCGTCGCGGGCGGCGTGCTGCTGTCGTGGCATCCGGGCGCGGCGGGCGTGCCG
CTCGGCGCGCTGCTCGTCGCGGCCGCCTGCGCGTGCCGGGCGATCGACAACAACCTGACGCGCAAGGTCTCGACTCACGA
CGCCGCGGCGATCGCGTGCGTCAAGGGCCTCGTCGCCGGCACGGTCAACCTCGGCATCGCGCTCGCGCTCGGCGCGCGGC
TGCCCGCGGCCGCCGACAGCGCGGCCGCGATGCTCACGGGCTTCGCCGGCTATGGCGTGAGCCTCGTGCTGTTCGTCGTC
GCGCTGCGCAATCTCGGCACCGCGCGGACCGGCGCGTATTTCTCGGTCGCGCCGCTGTTCGGCGTCGGGCTGTCGCTCGC
GCTGTGGCCCGAATGGCCGCCGCTGTCGTTCTGGGCCGCCGCGGCGCTGATGGCGCTCGGCATCTGGCTGCACCTGCGCG
AGCGCCACGAGCATCCGCATACGCACGAGGCGCTCGAGCACAGCCATCGGCACCGGCACGACACGCATCATCAGCACGCG
CACGACTTCGACTGGGACGGCACGGAGCCGCACACGCACGCGCACCGGCACACGCCGATCACGCACACGCATGCGCATTT
CCCGGACATTCATCACCGGCACTCGCACTGA

Upstream 100 bases:

>100_bases
TCGCGGCCCGCCGCCGCACAAAACGGATGACCGCCGGCCCCGCGTTGCGCTATCGTGGCGTCACTTCTCCACGTCGATCC
GCGCCGCCCGCGCCATGCCC

Downstream 100 bases:

>100_bases
GCGCCGGGCGCGACGCATCCCGCCCGGCGCGTCCCGCGCGACACCGACGGGCCGCCGTTCCCGCGACGGCGCCCCCACGT
CGCGGCGTCGCGGCGTCGCG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLARGAGAGASPAGHARLPLAELP
WLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFTALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVP
LGALLVAAACACRAIDNNLTRKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV
ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPHTHEALEHSHRHRHDTHHQHA
HDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH

Sequences:

>Translated_356_residues
MSARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLARGAGAGASPAGHARLPLAELP
WLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFTALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVP
LGALLVAAACACRAIDNNLTRKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV
ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPHTHEALEHSHRHRHDTHHQHA
HDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH
>Mature_355_residues
SARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLARGAGAGASPAGHARLPLAELPW
LAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFTALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVPL
GALLVAAACACRAIDNNLTRKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVVA
LRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPHTHEALEHSHRHRHDTHHQHAH
DFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 36966; Mature: 36835

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLAR
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GAGAGASPAGHARLPLAELPWLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFT
CCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVPLGALLVAAACACRAIDNNLT
HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPH
HHHHCCCCCCCCCEEHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
THEALEHSHRHRHDTHHQHAHDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SARTNAAFTALLAAALFGATTPLAKTLLGSLTPFMVAGLFYLGSGVGLGAFMLMRRLAR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
GAGAGASPAGHARLPLAELPWLAGAVAAGGVAGPALLMLGLATTPAATSALLLNLEGVFT
CCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALIAWAVFRENVDAQIFAGMAAIVAGGVLLSWHPGAAGVPLGALLVAAACACRAIDNNLT
HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RKVSTHDAAAIACVKGLVAGTVNLGIALALGARLPAAADSAAAMLTGFAGYGVSLVLFVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALRNLGTARTGAYFSVAPLFGVGLSLALWPEWPPLSFWAAAALMALGIWLHLRERHEHPH
HHHHCCCCCCCCCEEHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
THEALEHSHRHRHDTHHQHAHDFDWDGTEPHTHAHRHTPITHTHAHFPDIHHRHSH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]