Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446572
Identifier: 126446572
GI number: 126446572
Start: 1759396
End: 1760328
Strand: Direct
Name: 126446572
Synonym: BMA10247_A1829
Alternate gene names: NA
Gene position: 1759396-1760328 (Clockwise)
Preceding gene: 126446012
Following gene: 126446022
Centisome position: 74.78
GC content: 67.74
Gene sequence:
>933_bases GTGGCCAGCCCCCGCAAAGTCATCATCACCTGCGCGCCGACGGGCGCGATCCATACACCGTCGATGTCGCCGCATCTACC CGTCACGCCGCGCGAGATCGAGGAAGCGGCGATCGCGGCGGCCGAAGCGGGCGCGGCGATCCTGCACCTGCACGCCCGCG ATCCGGCCGACGGCCGGCCGACGCAGGACCCGGCCGTGTTCGCCGAGTTCCTGCCGCGCATCAAGGCGCGCACCGACGCG GTGATCAACATCACGACGGGCGGCAGCCCGCACATGACGGTCGCCGAGCGCCTGCGCCCCGCGCATCATTTCCAGCCCGA AGTCGCTTCGCTGAACATGGGCTCGATGAACTTCGGCCTGTATCCGATGCTCGAGCGCTTTCGCGAATTCCGGCATCCGT GGGAACGCGAACATCTGGAAAAGAGCCGCGACCTCGTGTTCAAGAACACGTTCGCCGACATCGAGACGATTCTCGCGAGC TGCGGCGCGAACGGCACCCGTTTCGAATTCGAGTGCTACGACATCTCGCACCTGTACAACCTCGCGCATTTCGTCGAGCG CGGGCTCGCGAAGCCGCCGTTCTTCGTCCAGAGCGTGTTCGGGCTGCTCGGCGGCATCGGCGCGCATCCGGAGGATCTCG CGCACATGCGCCGCACGGCGGACCGCCTGTTCGGCGCCGACTACGTGTGGTCGATTCTCGGCGCGGGCAAGCACCAGATT CCGCTCGCGACGATCGGCGCGGCCCAGGGCGCGAACGTACGCGTCGGCCTCGAGGATTCGTTGTGGATCGCCCCCGGCCG GCTCGCCGAATCGAGCGCCGCGCAGGTACGCAAGATTCGTCAGGTACTCGAAGGATTGTCGCTCGAGATCGCGACGCCCG CCGAAGCGCGCGCGATGCTCGCGCTCAAGGGCGGCGGCGCGGTCAACTTCTGA
Upstream 100 bases:
>100_bases GCGGGCACGGGATTTCCGGGCAGGCGATTTCCGTCTGCGGCAACGTCGAGGCGCTCTGACGCGCCGCCCTTCACCGCCGA GCATCGAAAGGAGCCCTAAC
Downstream 100 bases:
>100_bases ACGCGCACCGCCCGACCATTCGACACGCAAGCGCAGACACGCGGCATCGGCGCACGCCGCTGCCCGGCAGGCCGCCTTTC GCCCCGCTCCCCGCGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MASPRKVIITCAPTGAIHTPSMSPHLPVTPREIEEAAIAAAEAGAAILHLHARDPADGRPTQDPAVFAEFLPRIKARTDA VINITTGGSPHMTVAERLRPAHHFQPEVASLNMGSMNFGLYPMLERFREFRHPWEREHLEKSRDLVFKNTFADIETILAS CGANGTRFEFECYDISHLYNLAHFVERGLAKPPFFVQSVFGLLGGIGAHPEDLAHMRRTADRLFGADYVWSILGAGKHQI PLATIGAAQGANVRVGLEDSLWIAPGRLAESSAAQVRKIRQVLEGLSLEIATPAEARAMLALKGGGAVNF
Sequences:
>Translated_310_residues MASPRKVIITCAPTGAIHTPSMSPHLPVTPREIEEAAIAAAEAGAAILHLHARDPADGRPTQDPAVFAEFLPRIKARTDA VINITTGGSPHMTVAERLRPAHHFQPEVASLNMGSMNFGLYPMLERFREFRHPWEREHLEKSRDLVFKNTFADIETILAS CGANGTRFEFECYDISHLYNLAHFVERGLAKPPFFVQSVFGLLGGIGAHPEDLAHMRRTADRLFGADYVWSILGAGKHQI PLATIGAAQGANVRVGLEDSLWIAPGRLAESSAAQVRKIRQVLEGLSLEIATPAEARAMLALKGGGAVNF >Mature_309_residues ASPRKVIITCAPTGAIHTPSMSPHLPVTPREIEEAAIAAAEAGAAILHLHARDPADGRPTQDPAVFAEFLPRIKARTDAV INITTGGSPHMTVAERLRPAHHFQPEVASLNMGSMNFGLYPMLERFREFRHPWEREHLEKSRDLVFKNTFADIETILASC GANGTRFEFECYDISHLYNLAHFVERGLAKPPFFVQSVFGLLGGIGAHPEDLAHMRRTADRLFGADYVWSILGAGKHQIP LATIGAAQGANVRVGLEDSLWIAPGRLAESSAAQVRKIRQVLEGLSLEIATPAEARAMLALKGGGAVNF
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33718; Mature: 33587
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPRKVIITCAPTGAIHTPSMSPHLPVTPREIEEAAIAAAEAGAAILHLHARDPADGRP CCCCCEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC TQDPAVFAEFLPRIKARTDAVINITTGGSPHMTVAERLRPAHHFQPEVASLNMGSMNFGL CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCHHHCCCCCHHCCCCCCCCCCH YPMLERFREFRHPWEREHLEKSRDLVFKNTFADIETILASCGANGTRFEFECYDISHLYN HHHHHHHHHHCCCHHHHHHHHHHCEEHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHH LAHFVERGLAKPPFFVQSVFGLLGGIGAHPEDLAHMRRTADRLFGADYVWSILGAGKHQI HHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCC PLATIGAAQGANVRVGLEDSLWIAPGRLAESSAAQVRKIRQVLEGLSLEIATPAEARAML CEEEECCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHEEEE ALKGGGAVNF EEECCCCCCC >Mature Secondary Structure ASPRKVIITCAPTGAIHTPSMSPHLPVTPREIEEAAIAAAEAGAAILHLHARDPADGRP CCCCEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCC TQDPAVFAEFLPRIKARTDAVINITTGGSPHMTVAERLRPAHHFQPEVASLNMGSMNFGL CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCHHHCCCCCHHCCCCCCCCCCH YPMLERFREFRHPWEREHLEKSRDLVFKNTFADIETILASCGANGTRFEFECYDISHLYN HHHHHHHHHHCCCHHHHHHHHHHCEEHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHH LAHFVERGLAKPPFFVQSVFGLLGGIGAHPEDLAHMRRTADRLFGADYVWSILGAGKHQI HHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCC PLATIGAAQGANVRVGLEDSLWIAPGRLAESSAAQVRKIRQVLEGLSLEIATPAEARAML CEEEECCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHEEEE ALKGGGAVNF EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA