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The map label for this gene is ttuB [H]

Identifier: 126446022

GI number: 126446022

Start: 1760524

End: 1761861

Strand: Direct

Name: ttuB [H]

Synonym: BMA10247_A1830

Alternate gene names: 126446022

Gene position: 1760524-1761861 (Clockwise)

Preceding gene: 126446572

Following gene: 126446930

Centisome position: 74.83

GC content: 70.63

Gene sequence:

>1338_bases
ATGTCCACGCCTCATGCCGAAGCCTTCTGCGCGCCCGCCGGCAGCGCGCGCGCATCGCTGAACCGCCTGCTGTTTCGCAA
GCTGATGCCGATTCTGATCACCGCGTACGTGATCAGCTTTCTCGACCGCACGAACATCGCGTTCGCGAAGCATTCGATGG
GCATCGATCTCGGCCTCTCGTCGGCCGCCTACGGCCTCGGCGCGGGGCTCTTCTTCGTCACGTACGCATTGTTCGAGATC
CCGAGCAATCTGATCATGCATCGCGTCGGCGCACGCTTCTGGATCGCGCGGATCATGATCACTTGGGGCGCGCTGTCCGT
CGCGATGGCGCTCGTGCGCGGCGAGACGTCGTTCTACGCGATGCGGCTGCTGCTCGGCGCCGCCGAAGCGGGGCTCTTTC
CCGGCGTGATGCTGTATCTGACGTACTGGTTCGGCCACGAGGAACGTGCGCGCGCGACCGGCTATTTCCTGCTCGGCGTA
TGCGTGGCGAACATCGTCGGCGGCCCGCTCGCGGGCGCGCTGCTCGCACTCGACGGCGCGCTCGGGCTGCACGGCTGGCA
GTGGCTCTTCATCGTCGAAGGCGTGCCGGCGATCGCGCTCGCCTTCGTCGTCTGGGCCCGCCTGCCGGAGCGGCCGAGCG
ACGCCCGCTGGCTCGCGCCCGAGCTCGGCCGCGCACTCGAGCGCGCGCTCGCGAGCGAGCAGGCACAGAGCGCGGCGGCG
CACGGCGCGCAGGCGTTCGGCGTCGCGCTGCGCGATCCGCAGATCTGGCTCGCGATCTTCGTGTACTTCTGCCATCAACT
GACGATCTACACGATGATCTTCTTCCTGCCCGGCATCATCGGCGAATCGGGGCGCTTCAGCCCGATCGTCGTCGGCCTGC
TCGCCGCGATGCCGTGGCTTGCCGCGGCGCTCGGCGCGGCGACATTGCCGCGCTTCGCGCGCGATTCGTCGCGATCGCGG
CGGATTCTGTGCGCGGGGCTCGGGGTGATGGCCGCGGGGCTCGTCTGCGCGGCGTATGCGCCGCCCGCGGCCGCGCTCGC
GAGCGTGTGCGTCGCCGCGTCGATGTTCTTCGTCGTGCAATCGATCGTCTTCACGTTCCCGGCCTCGCGCCTCGCGGGCA
GCGCGCTCGCGGGCGGGCTCGGCCTCGTCAATACGTGCGGCCTGCTCGGCGGCTTCGTCGGGCCGACCGTCGTCGGCACG
ATCGAGCAGACGACCGGCCACGCGAAGAACGGTCTCGCGTTGCTCGCGATCGCGCTCGGCGTCGCCGCGCTCGCGAGCCT
GCGGCTGCGGCACGGGCACGAACGCGCGCACCCGGCGCGGCCGAGCCGCGCGCGGTGA

Upstream 100 bases:

>100_bases
AGCGCCGCCGGCGCGCGACCCGCGCATCTGCCCGTCATCTGCTGAACGCGGAGCGCCGTGCTTGCCGTGCGCTCCGGCTC
GTTCCCACGGAGCCGCACTT

Downstream 100 bases:

>100_bases
GCGGTGAGCGGTGAGCGGTGAGCGATGAACGATGAACGATGAACGGCGGTCCGCATGCGCCCGCCGCCGCCCGTCAGCGC
GCGGCCGGGTACGCGATGCG

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSTPHAEAFCAPAGSARASLNRLLFRKLMPILITAYVISFLDRTNIAFAKHSMGIDLGLSSAAYGLGAGLFFVTYALFEI
PSNLIMHRVGARFWIARIMITWGALSVAMALVRGETSFYAMRLLLGAAEAGLFPGVMLYLTYWFGHEERARATGYFLLGV
CVANIVGGPLAGALLALDGALGLHGWQWLFIVEGVPAIALAFVVWARLPERPSDARWLAPELGRALERALASEQAQSAAA
HGAQAFGVALRDPQIWLAIFVYFCHQLTIYTMIFFLPGIIGESGRFSPIVVGLLAAMPWLAAALGAATLPRFARDSSRSR
RILCAGLGVMAAGLVCAAYAPPAAALASVCVAASMFFVVQSIVFTFPASRLAGSALAGGLGLVNTCGLLGGFVGPTVVGT
IEQTTGHAKNGLALLAIALGVAALASLRLRHGHERAHPARPSRAR

Sequences:

>Translated_445_residues
MSTPHAEAFCAPAGSARASLNRLLFRKLMPILITAYVISFLDRTNIAFAKHSMGIDLGLSSAAYGLGAGLFFVTYALFEI
PSNLIMHRVGARFWIARIMITWGALSVAMALVRGETSFYAMRLLLGAAEAGLFPGVMLYLTYWFGHEERARATGYFLLGV
CVANIVGGPLAGALLALDGALGLHGWQWLFIVEGVPAIALAFVVWARLPERPSDARWLAPELGRALERALASEQAQSAAA
HGAQAFGVALRDPQIWLAIFVYFCHQLTIYTMIFFLPGIIGESGRFSPIVVGLLAAMPWLAAALGAATLPRFARDSSRSR
RILCAGLGVMAAGLVCAAYAPPAAALASVCVAASMFFVVQSIVFTFPASRLAGSALAGGLGLVNTCGLLGGFVGPTVVGT
IEQTTGHAKNGLALLAIALGVAALASLRLRHGHERAHPARPSRAR
>Mature_444_residues
STPHAEAFCAPAGSARASLNRLLFRKLMPILITAYVISFLDRTNIAFAKHSMGIDLGLSSAAYGLGAGLFFVTYALFEIP
SNLIMHRVGARFWIARIMITWGALSVAMALVRGETSFYAMRLLLGAAEAGLFPGVMLYLTYWFGHEERARATGYFLLGVC
VANIVGGPLAGALLALDGALGLHGWQWLFIVEGVPAIALAFVVWARLPERPSDARWLAPELGRALERALASEQAQSAAAH
GAQAFGVALRDPQIWLAIFVYFCHQLTIYTMIFFLPGIIGESGRFSPIVVGLLAAMPWLAAALGAATLPRFARDSSRSRR
ILCAGLGVMAAGLVCAAYAPPAAALASVCVAASMFFVVQSIVFTFPASRLAGSALAGGLGLVNTCGLLGGFVGPTVVGTI
EQTTGHAKNGLALLAIALGVAALASLRLRHGHERAHPARPSRAR

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=417, Percent_Identity=39.3285371702638, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI87082320, Length=452, Percent_Identity=26.7699115044248, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI2367379, Length=277, Percent_Identity=24.9097472924188, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI2367193, Length=417, Percent_Identity=22.3021582733813, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1789515, Length=285, Percent_Identity=24.9122807017544, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17540458, Length=248, Percent_Identity=25, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17569727, Length=181, Percent_Identity=25.9668508287293, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321698, Length=292, Percent_Identity=25.6849315068493, Blast_Score=93, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6322025, Length=447, Percent_Identity=22.5950782997763, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319250, Length=230, Percent_Identity=23.9130434782609, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319876, Length=221, Percent_Identity=25.7918552036199, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322612, Length=238, Percent_Identity=24.3697478991597, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46975; Mature: 46844

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPHAEAFCAPAGSARASLNRLLFRKLMPILITAYVISFLDRTNIAFAKHSMGIDLGLS
CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
SAAYGLGAGLFFVTYALFEIPSNLIMHRVGARFWIARIMITWGALSVAMALVRGETSFYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MRLLLGAAEAGLFPGVMLYLTYWFGHEERARATGYFLLGVCVANIVGGPLAGALLALDGA
HHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCH
LGLHGWQWLFIVEGVPAIALAFVVWARLPERPSDARWLAPELGRALERALASEQAQSAAA
HCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HGAQAFGVALRDPQIWLAIFVYFCHQLTIYTMIFFLPGIIGESGRFSPIVVGLLAAMPWL
CCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AAALGAATLPRFARDSSRSRRILCAGLGVMAAGLVCAAYAPPAAALASVCVAASMFFVVQ
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SIVFTFPASRLAGSALAGGLGLVNTCGLLGGFVGPTVVGTIEQTTGHAKNGLALLAIALG
HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHH
VAALASLRLRHGHERAHPARPSRAR
HHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STPHAEAFCAPAGSARASLNRLLFRKLMPILITAYVISFLDRTNIAFAKHSMGIDLGLS
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
SAAYGLGAGLFFVTYALFEIPSNLIMHRVGARFWIARIMITWGALSVAMALVRGETSFYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MRLLLGAAEAGLFPGVMLYLTYWFGHEERARATGYFLLGVCVANIVGGPLAGALLALDGA
HHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCH
LGLHGWQWLFIVEGVPAIALAFVVWARLPERPSDARWLAPELGRALERALASEQAQSAAA
HCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
HGAQAFGVALRDPQIWLAIFVYFCHQLTIYTMIFFLPGIIGESGRFSPIVVGLLAAMPWL
CCHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AAALGAATLPRFARDSSRSRRILCAGLGVMAAGLVCAAYAPPAAALASVCVAASMFFVVQ
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SIVFTFPASRLAGSALAGGLGLVNTCGLLGGFVGPTVVGTIEQTTGHAKNGLALLAIALG
HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCHHHHHHHHH
VAALASLRLRHGHERAHPARPSRAR
HHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]