| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is mmlH [H]
Identifier: 126446309
GI number: 126446309
Start: 1357362
End: 1358786
Strand: Direct
Name: mmlH [H]
Synonym: BMA10247_A1391
Alternate gene names: 126446309
Gene position: 1357362-1358786 (Clockwise)
Preceding gene: 126445713
Following gene: 126446438
Centisome position: 57.69
GC content: 71.72
Gene sequence:
>1425_bases ATGGAGCAGCGTGCGGCGCGCATGGCGAGCAGCGCCCGACAGGAGACGACAGTGTTCACATGGTTCGCCGCCGTATCGCC GCGCGAACGGCGCACGTTCTGGGCCTGCTTCGGCGGCTGGGCGCTCGATGCGCTCGACATGCAGATGTTCAGCCTCGTGA TCCCCGCGATCGTCGCCGAATGGTCGCTGTCGCGCACGCAGGCGGGCTTCGTCGGCGGCGCGACGCTCGTCGCGTCGGCG CTCGGCGGCTGGGTGGCCGGCATGCTGTCCGACCGCTTCGGCCGCGTGCGGACGCTGCAATGGACGATCGCGTGCTTCTC GGTCGGCACGTTCGCCTGCGCGTTCGCGACGAGCTACCCGCAATTCGTGACCCTGAAGACGCTGCAGGGCCTCGGCTTCG GCGGCGAATGGGCGGCGGGCGCCGTGCTGATGGCGGAGACGATCCGCGCCGAGCACCGCGGCAAGGCGATGGGCGCCGTG CAGAGCGCATGGGCGCTCGGCTGGGGGAGCGCCGTGCTGCTTTATGCGCTCGCGTTCTCGCTGCTGCCCGCCGAGCTCGC ATGGCGCGCGATGTTCGCCATCGGGCTGCTGCCGGCGCTGCTGATCGTCTATGTGCGGCGCGGGATTGCCGAGCCTTCGG CGCGCGCCTTGAATCCGTCCGGGCCGTGCGATCCGCCCGAGCCGCCCAATTCGCCGGACGGAGCACCTCCGTCGGGCGCG TCGCCGGCGGTGCGGGCGAGCGCCCCGCTCGTCGGCATCTTCTCGCGCGGCACCCGGCGCATGACGCTGATCGGCGCGCT GCTCGGCGTCGGCGCGCACGGCGGCTATTACGCGCTGATGACGTGGCTGCCGACCTATCTGAAAACCGAGCGGCATCTGT CGGTGCTCGGCACGGGCGGCTATCTCGCCGTCATCATCGTCGCGTTCTTCTGCGGCTGCCTCGCGAGCGCGCAGTTGCTC GACCTCATCGGTCGACGCGGCACGATCCTCGCGTTCGCCGCGTGCTGCGTCGGCACGGTGATCCTCTACCTGTTCGCGCC GCTCGGCAACGCGGCGATGCTCGCGCTCGGCTTTGCGCTCGGCTTTTTCGCGGCGGGCATCCCGGCAAGCATGGGCGCGC TGTTCAACGAAATGTATCCGCGCGGCACGCGCGGCACGGGCGTCGGCTTTTGCTACAACTTCGGGCGCGTCGCATCGGCG GGCTTTCCGGTGCTGGTCGGGCACATGTCGGCCGGCATGCCGCTCGGCACCGCGATCGGCATCGGCGCGGCGGTCGCCTA TTCGATCGTCGTCGTCGCCGTGCTGATGCTGCCCGAGACGCGCGGGCGCACGCTCGACGATTGCGCGAGCGCGGATGCCG ACGCCGCCCGCGCGGGCGCCGGGCGCATCGGTGCGCCGGCAGCGCCGGGCGCGCGGCATCGCTGA
Upstream 100 bases:
>100_bases GCCCCGCGAGCGAATTCATCTATCAGGCGGAAATCCGCTAGCGGCCGGCTCGCGCGACAGCGGAGCTCGCGCACGGGCCG CGCGCTCGCGCGAGCAACGC
Downstream 100 bases:
>100_bases AGTTCGCGCCGGATTCAGGTCGGCGGTTCGTGGCATGAGGAGCATCGAGCATTGAGCGAGCAAGAATGGAACGCGTTCGC GCCCGCGGCGGCGGCGCCGC
Product: major facilitator family transporter
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MEQRAARMASSARQETTVFTWFAAVSPRERRTFWACFGGWALDALDMQMFSLVIPAIVAEWSLSRTQAGFVGGATLVASA LGGWVAGMLSDRFGRVRTLQWTIACFSVGTFACAFATSYPQFVTLKTLQGLGFGGEWAAGAVLMAETIRAEHRGKAMGAV QSAWALGWGSAVLLYALAFSLLPAELAWRAMFAIGLLPALLIVYVRRGIAEPSARALNPSGPCDPPEPPNSPDGAPPSGA SPAVRASAPLVGIFSRGTRRMTLIGALLGVGAHGGYYALMTWLPTYLKTERHLSVLGTGGYLAVIIVAFFCGCLASAQLL DLIGRRGTILAFAACCVGTVILYLFAPLGNAAMLALGFALGFFAAGIPASMGALFNEMYPRGTRGTGVGFCYNFGRVASA GFPVLVGHMSAGMPLGTAIGIGAAVAYSIVVVAVLMLPETRGRTLDDCASADADAARAGAGRIGAPAAPGARHR
Sequences:
>Translated_474_residues MEQRAARMASSARQETTVFTWFAAVSPRERRTFWACFGGWALDALDMQMFSLVIPAIVAEWSLSRTQAGFVGGATLVASA LGGWVAGMLSDRFGRVRTLQWTIACFSVGTFACAFATSYPQFVTLKTLQGLGFGGEWAAGAVLMAETIRAEHRGKAMGAV QSAWALGWGSAVLLYALAFSLLPAELAWRAMFAIGLLPALLIVYVRRGIAEPSARALNPSGPCDPPEPPNSPDGAPPSGA SPAVRASAPLVGIFSRGTRRMTLIGALLGVGAHGGYYALMTWLPTYLKTERHLSVLGTGGYLAVIIVAFFCGCLASAQLL DLIGRRGTILAFAACCVGTVILYLFAPLGNAAMLALGFALGFFAAGIPASMGALFNEMYPRGTRGTGVGFCYNFGRVASA GFPVLVGHMSAGMPLGTAIGIGAAVAYSIVVVAVLMLPETRGRTLDDCASADADAARAGAGRIGAPAAPGARHR >Mature_474_residues MEQRAARMASSARQETTVFTWFAAVSPRERRTFWACFGGWALDALDMQMFSLVIPAIVAEWSLSRTQAGFVGGATLVASA LGGWVAGMLSDRFGRVRTLQWTIACFSVGTFACAFATSYPQFVTLKTLQGLGFGGEWAAGAVLMAETIRAEHRGKAMGAV QSAWALGWGSAVLLYALAFSLLPAELAWRAMFAIGLLPALLIVYVRRGIAEPSARALNPSGPCDPPEPPNSPDGAPPSGA SPAVRASAPLVGIFSRGTRRMTLIGALLGVGAHGGYYALMTWLPTYLKTERHLSVLGTGGYLAVIIVAFFCGCLASAQLL DLIGRRGTILAFAACCVGTVILYLFAPLGNAAMLALGFALGFFAAGIPASMGALFNEMYPRGTRGTGVGFCYNFGRVASA GFPVLVGHMSAGMPLGTAIGIGAAVAYSIVVVAVLMLPETRGRTLDDCASADADAARAGAGRIGAPAAPGARHR
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=469, Percent_Identity=25.3731343283582, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI213021148, Length=442, Percent_Identity=22.1719457013575, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87082231, Length=479, Percent_Identity=25.4697286012526, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI87082404, Length=420, Percent_Identity=23.3333333333333, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786229, Length=444, Percent_Identity=22.972972972973, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081723, Length=420, Percent_Identity=27.8571428571429, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI87082159, Length=366, Percent_Identity=25.6830601092896, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790550, Length=414, Percent_Identity=24.6376811594203, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI32564663, Length=439, Percent_Identity=23.9179954441913, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49304; Mature: 49304
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQRAARMASSARQETTVFTWFAAVSPRERRTFWACFGGWALDALDMQMFSLVIPAIVAE CCHHHHHHHHHHHHHHEEEEEEECCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHH WSLSRTQAGFVGGATLVASALGGWVAGMLSDRFGRVRTLQWTIACFSVGTFACAFATSYP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCC QFVTLKTLQGLGFGGEWAAGAVLMAETIRAEHRGKAMGAVQSAWALGWGSAVLLYALAFS CEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLPAELAWRAMFAIGLLPALLIVYVRRGIAEPSARALNPSGPCDPPEPPNSPDGAPPSGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPAVRASAPLVGIFSRGTRRMTLIGALLGVGAHGGYYALMTWLPTYLKTERHLSVLGTGG CCCCCCCCCEEEHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCH YLAVIIVAFFCGCLASAQLLDLIGRRGTILAFAACCVGTVILYLFAPLGNAAMLALGFAL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GFFAAGIPASMGALFNEMYPRGTRGTGVGFCYNFGRVASAGFPVLVGHMSAGMPLGTAIG HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHCCCCCEEEHHHHCCCCCHHHHH IGAAVAYSIVVVAVLMLPETRGRTLDDCASADADAARAGAGRIGAPAAPGARHR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEQRAARMASSARQETTVFTWFAAVSPRERRTFWACFGGWALDALDMQMFSLVIPAIVAE CCHHHHHHHHHHHHHHEEEEEEECCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHH WSLSRTQAGFVGGATLVASALGGWVAGMLSDRFGRVRTLQWTIACFSVGTFACAFATSYP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCC QFVTLKTLQGLGFGGEWAAGAVLMAETIRAEHRGKAMGAVQSAWALGWGSAVLLYALAFS CEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLPAELAWRAMFAIGLLPALLIVYVRRGIAEPSARALNPSGPCDPPEPPNSPDGAPPSGA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SPAVRASAPLVGIFSRGTRRMTLIGALLGVGAHGGYYALMTWLPTYLKTERHLSVLGTGG CCCCCCCCCEEEHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCH YLAVIIVAFFCGCLASAQLLDLIGRRGTILAFAACCVGTVILYLFAPLGNAAMLALGFAL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GFFAAGIPASMGALFNEMYPRGTRGTGVGFCYNFGRVASAGFPVLVGHMSAGMPLGTAIG HHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHCCCCCEEEHHHHCCCCCHHHHH IGAAVAYSIVVVAVLMLPETRGRTLDDCASADADAARAGAGRIGAPAAPGARHR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]