| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126446438
Identifier: 126446438
GI number: 126446438
Start: 1358838
End: 1359728
Strand: Direct
Name: 126446438
Synonym: BMA10247_A1392
Alternate gene names: NA
Gene position: 1358838-1359728 (Clockwise)
Preceding gene: 126446309
Following gene: 126447106
Centisome position: 57.76
GC content: 73.85
Gene sequence:
>891_bases TTGAGCGAGCAAGAATGGAACGCGTTCGCGCCCGCGGCGGCGGCGCCGCATGCGGCTTGCGGCATCACGGCGATCGACGC GCACGCGCATGTGTTCGAGACGGGGCTGCCGCTCGCCGGCCGACGCCGCTACGCGCCCGATTATGACGCGCCGCTCGACG CGTACCTCGCGCAGCTCGACGCGCATCGCGTGTCGCACGGCGTGCTCGTGCAGCCGAGCTTTCTCGGTAGCGACTGCCGC TACCTGCTGCGCGCGCTCGCGCGGCAACCGCGGCGCCTGCGCGGCGTCGCGGTGATCGACGCCGGCTGCGCGCCGGCGGC GCTCGATGCGCTCGATCGCGCGGGCGTCGTCGGCATCCGGCTGAACCTGATCGGCATGCCGGACCCCGCGCTCGACGGCC CCGCCTGGCGCGCGACGCTCGAGCGCGTCGCCGCGCTGCGCTGGCATGTCGAGCTGCACGCGCAGGCGCAGCGGCTGGCG CGGCTGATCGCGCCGCTGCTCGCGCATCGCATGAACATCGTCGTCGATCATTTCGGTCGCCCGGAGCCGGCACGCGGCAT CGCCGACGCGGGCTTTCGCGATCTGCTGCGTGCGGCCGCGACGCGGCGCGTGTGGGTGAAGCTCTCCGGCGCCTATCGCA ACTGGCCGTTCGCGCCCGGCGAAGCGCACGCCCGTGCGCGCGCCGCGTTCGACGCGCTCGCAGCCGAGTTCGGCGCCGAA CGGCTCGTGTGGGGCAGCGACTGGCCGCACACGCAGTTCGAGCGGACCGAGACATTCGGCCGCGCACTCGCGTTCGCCCG GCGCTGGATCCCTGACGACGCGATGCGACGCGCGATCTTCGTCGAGACGCCCGCGCGGCTGTTTCGATTCGGCGAGCAGC GCGGCGCGTAG
Upstream 100 bases:
>100_bases CGCCGGGCGCATCGGTGCGCCGGCAGCGCCGGGCGCGCGGCATCGCTGAAGTTCGCGCCGGATTCAGGTCGGCGGTTCGT GGCATGAGGAGCATCGAGCA
Downstream 100 bases:
>100_bases CGGTAACCGGAAGGCAACCGGAGCGTAACCGGAAACGGACGGGCGGCGGCAAGACAAGGCGCGCGGGGCCGGCCGATCCC GACCCGGCTCGCAGCGCGCG
Product: amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase; 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSEQEWNAFAPAAAAPHAACGITAIDAHAHVFETGLPLAGRRRYAPDYDAPLDAYLAQLDAHRVSHGVLVQPSFLGSDCR YLLRALARQPRRLRGVAVIDAGCAPAALDALDRAGVVGIRLNLIGMPDPALDGPAWRATLERVAALRWHVELHAQAQRLA RLIAPLLAHRMNIVVDHFGRPEPARGIADAGFRDLLRAAATRRVWVKLSGAYRNWPFAPGEAHARARAAFDALAAEFGAE RLVWGSDWPHTQFERTETFGRALAFARRWIPDDAMRRAIFVETPARLFRFGEQRGA
Sequences:
>Translated_296_residues MSEQEWNAFAPAAAAPHAACGITAIDAHAHVFETGLPLAGRRRYAPDYDAPLDAYLAQLDAHRVSHGVLVQPSFLGSDCR YLLRALARQPRRLRGVAVIDAGCAPAALDALDRAGVVGIRLNLIGMPDPALDGPAWRATLERVAALRWHVELHAQAQRLA RLIAPLLAHRMNIVVDHFGRPEPARGIADAGFRDLLRAAATRRVWVKLSGAYRNWPFAPGEAHARARAAFDALAAEFGAE RLVWGSDWPHTQFERTETFGRALAFARRWIPDDAMRRAIFVETPARLFRFGEQRGA >Mature_295_residues SEQEWNAFAPAAAAPHAACGITAIDAHAHVFETGLPLAGRRRYAPDYDAPLDAYLAQLDAHRVSHGVLVQPSFLGSDCRY LLRALARQPRRLRGVAVIDAGCAPAALDALDRAGVVGIRLNLIGMPDPALDGPAWRATLERVAALRWHVELHAQAQRLAR LIAPLLAHRMNIVVDHFGRPEPARGIADAGFRDLLRAAATRRVWVKLSGAYRNWPFAPGEAHARARAAFDALAAEFGAER LVWGSDWPHTQFERTETFGRALAFARRWIPDDAMRRAIFVETPARLFRFGEQRGA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32618; Mature: 32486
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQEWNAFAPAAAAPHAACGITAIDAHAHVFETGLPLAGRRRYAPDYDAPLDAYLAQLD CCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH AHRVSHGVLVQPSFLGSDCRYLLRALARQPRRLRGVAVIDAGCAPAALDALDRAGVVGIR HHHHCCCEEECCHHCCHHHHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHCCEEEEE LNLIGMPDPALDGPAWRATLERVAALRWHVELHAQAQRLARLIAPLLAHRMNIVVDHFGR EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEPARGIADAGFRDLLRAAATRRVWVKLSGAYRNWPFAPGEAHARARAAFDALAAEFGAE CCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RLVWGSDWPHTQFERTETFGRALAFARRWIPDDAMRRAIFVETPARLFRFGEQRGA EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECHHHHHHHHHHCCC >Mature Secondary Structure SEQEWNAFAPAAAAPHAACGITAIDAHAHVFETGLPLAGRRRYAPDYDAPLDAYLAQLD CCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH AHRVSHGVLVQPSFLGSDCRYLLRALARQPRRLRGVAVIDAGCAPAALDALDRAGVVGIR HHHHCCCEEECCHHCCHHHHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHCCEEEEE LNLIGMPDPALDGPAWRATLERVAALRWHVELHAQAQRLARLIAPLLAHRMNIVVDHFGR EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEPARGIADAGFRDLLRAAATRRVWVKLSGAYRNWPFAPGEAHARARAAFDALAAEFGAE CCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RLVWGSDWPHTQFERTETFGRALAFARRWIPDDAMRRAIFVETPARLFRFGEQRGA EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA