| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is camA [H]
Identifier: 126446234
GI number: 126446234
Start: 929216
End: 930430
Strand: Direct
Name: camA [H]
Synonym: BMA10247_A0982
Alternate gene names: 126446234
Gene position: 929216-930430 (Clockwise)
Preceding gene: 126445684
Following gene: 126445762
Centisome position: 39.5
GC content: 72.43
Gene sequence:
>1215_bases ATGCCGCGCACCGTCGTCGTGATCGGCGGCGGCCAGGCGGCGGGCTGGGTCGTGAAGACGTTGCGCGACGAGGGCTTCGC CGGGCGCATCGTGATGATCGCGGACGAAGCGCATCTGCCGTACGAGCGGCCTGCGCTGTCGAAGGCGGTGCTCGCGGGCG AGGCCGACATCGCGACCGTGCGCGTCATGCAGCCCGACGCGTTCGGCGCGCTCGACGTCGACGCGTGGCAGCCGGAGCGC GCGGCGTCGATCGATCGCGCGCGGCGCGTCGTGCGCACCGCGTCGGGCCGCGAGATCGAGTACGACCGGCTCGTGATCGC GACGGGCGGCACGCCGCGACGCCTGCCGGATGCGATCGTCGGGACCGCTCATCTTCACTACCTGCGCACGCTCGACGAGG CGCTCGCGCTCGGCGAGAAGCTGCGCGCGAGCCGCCGCGTGCTCGTGATCGGCGGCGGCTGGATCGGGCTCGAAGTGGCG GCGACCGCGCGCAAGCTCGGCGTCGACGCGCTCGTCGTCGAAGGCGCGCCGCGGCTTTGCGCGCGCTCGGTGCCCGGCGC GGTGTCCGATTTCCTGCTCGACCTGCACCGCGCAAACGGCGTCGACGTGCGGCTGAACGCGTCGCTCGCGTCGCTCGATG CGCATCCGGACGACGCGCGCCGCGTGCGCGCGACGCTCGCGGGCGGCGGCGTCGTCGACGCGGATTTCGCGGTCGCGGGG ATCGGTCTCGCGCTCAATACGTCGCTCGCGACCGAGGCGGGCCTGCATGTCGACGACGGCATCGTCGTCGACGAATACGG CGCGACGAGCGATCCGGCGATCTTCGCGTGCGGCGATGTCGCGAACCATCCGAACGCGTGGCTCAAGCGGCGCGTGCGGC TCGAATCATGGGCGAACGCGCAGCACCAGGCGATCGCGGCCGCGAAGGCGGTGCTCGGCGTGCGCGCGCCGTATGCGGAG ATTCCGTGGTTCTGGTCCGATCAGTACGACGTGAACCTACAGATCCTCGGCGATCTGCCGGCCGACGCGCGGTGCATCGT GCGCGGCGAGCTCGCGGCCAAGCGCGCGACGCTGTTCTTCGTCGCGGACGGCGCGCTGCGCGGGGTGATCGCGATCAACG CGGCGCGCGAGCTGAAGCTCGCGCGCAAATGGATGAATCAGGGGCGCGCGATCGACGTCGCCGCGCTGGCGGACACGGCG AAGGCGCTTGCCTGA
Upstream 100 bases:
>100_bases GACGGCGACACGCGCCGGCAAAAGAACGCGCAGGCGCCGCAAGGCAAATTCATGACGGAGCGCGACGATGACTGAGCACG CGGGTGCCGATGCGACGGCC
Downstream 100 bases:
>100_bases GCACGAGAACGACGACATGGAGGAGAACCCACGCATGAGCACACTGGAAACCGCGATCGCGGGCGCGCCCGCGGCCGACG CGGCGGCGGGCGCCGCGACA
Product: pyridine nucleotide-disulfide oxidoreductase, class I
Products: Oxidized Ferredoxin; NADH; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MPRTVVVIGGGQAAGWVVKTLRDEGFAGRIVMIADEAHLPYERPALSKAVLAGEADIATVRVMQPDAFGALDVDAWQPER AASIDRARRVVRTASGREIEYDRLVIATGGTPRRLPDAIVGTAHLHYLRTLDEALALGEKLRASRRVLVIGGGWIGLEVA ATARKLGVDALVVEGAPRLCARSVPGAVSDFLLDLHRANGVDVRLNASLASLDAHPDDARRVRATLAGGGVVDADFAVAG IGLALNTSLATEAGLHVDDGIVVDEYGATSDPAIFACGDVANHPNAWLKRRVRLESWANAQHQAIAAAKAVLGVRAPYAE IPWFWSDQYDVNLQILGDLPADARCIVRGELAAKRATLFFVADGALRGVIAINAARELKLARKWMNQGRAIDVAALADTA KALA
Sequences:
>Translated_404_residues MPRTVVVIGGGQAAGWVVKTLRDEGFAGRIVMIADEAHLPYERPALSKAVLAGEADIATVRVMQPDAFGALDVDAWQPER AASIDRARRVVRTASGREIEYDRLVIATGGTPRRLPDAIVGTAHLHYLRTLDEALALGEKLRASRRVLVIGGGWIGLEVA ATARKLGVDALVVEGAPRLCARSVPGAVSDFLLDLHRANGVDVRLNASLASLDAHPDDARRVRATLAGGGVVDADFAVAG IGLALNTSLATEAGLHVDDGIVVDEYGATSDPAIFACGDVANHPNAWLKRRVRLESWANAQHQAIAAAKAVLGVRAPYAE IPWFWSDQYDVNLQILGDLPADARCIVRGELAAKRATLFFVADGALRGVIAINAARELKLARKWMNQGRAIDVAALADTA KALA >Mature_403_residues PRTVVVIGGGQAAGWVVKTLRDEGFAGRIVMIADEAHLPYERPALSKAVLAGEADIATVRVMQPDAFGALDVDAWQPERA ASIDRARRVVRTASGREIEYDRLVIATGGTPRRLPDAIVGTAHLHYLRTLDEALALGEKLRASRRVLVIGGGWIGLEVAA TARKLGVDALVVEGAPRLCARSVPGAVSDFLLDLHRANGVDVRLNASLASLDAHPDDARRVRATLAGGGVVDADFAVAGI GLALNTSLATEAGLHVDDGIVVDEYGATSDPAIFACGDVANHPNAWLKRRVRLESWANAQHQAIAAAKAVLGVRAPYAEI PWFWSDQYDVNLQILGDLPADARCIVRGELAAKRATLFFVADGALRGVIAINAARELKLARKWMNQGRAIDVAALADTAK ALA
Specific function: The oxidation of camphor by cytochrome P450-CAM requires the participation of a flavoprotein, putidaredoxin reductase, and an iron-sulfur protein, putidaredoxin, to mediate the transfer of electrons from NADH to P450 for oxygen activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21389617, Length=392, Percent_Identity=27.0408163265306, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI226437568, Length=392, Percent_Identity=27.0408163265306, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI65787454, Length=392, Percent_Identity=27.0408163265306, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI4757732, Length=341, Percent_Identity=27.5659824046921, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI22202629, Length=341, Percent_Identity=27.5659824046921, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1788892, Length=411, Percent_Identity=37.4695863746959, Blast_Score=218, Evalue=6e-58, Organism=Escherichia coli, GI1789065, Length=317, Percent_Identity=29.3375394321767, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1789765, Length=283, Percent_Identity=28.9752650176678, Blast_Score=89, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17559934, Length=331, Percent_Identity=28.3987915407855, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI24639257, Length=328, Percent_Identity=26.5243902439024, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI281359715, Length=328, Percent_Identity=26.5243902439024, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI281359713, Length=328, Percent_Identity=26.5243902439024, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24639250, Length=328, Percent_Identity=26.5243902439024, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI18543267, Length=328, Percent_Identity=26.5243902439024, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24639252, Length=328, Percent_Identity=26.5243902439024, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24585130, Length=330, Percent_Identity=23.030303030303, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI28573993, Length=369, Percent_Identity=27.9132791327913, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI24581020, Length=369, Percent_Identity=27.9132791327913, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: 1.18.1.3 [C]
Molecular weight: Translated: 42856; Mature: 42724
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTVVVIGGGQAAGWVVKTLRDEGFAGRIVMIADEAHLPYERPALSKAVLAGEADIATV CCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEE RVMQPDAFGALDVDAWQPERAASIDRARRVVRTASGREIEYDRLVIATGGTPRRLPDAIV EEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCHHHH GTAHLHYLRTLDEALALGEKLRASRRVLVIGGGWIGLEVAATARKLGVDALVVEGAPRLC HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEHHHHHHCCCEEEEECCCCHHH ARSVPGAVSDFLLDLHRANGVDVRLNASLASLDAHPDDARRVRATLAGGGVVDADFAVAG HHCCCCHHHHHHHHHHCCCCEEEEEECCEEECCCCCCHHHHEEEEECCCCEEECCHHHEE IGLALNTSLATEAGLHVDDGIVVDEYGATSDPAIFACGDVANHPNAWLKRRVRLESWANA ECEEEECCHHHHCCCEECCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCH QHQAIAAAKAVLGVRAPYAEIPWFWSDQYDVNLQILGDLPADARCIVRGELAAKRATLFF HHHHHHHHHHHHHCCCCHHHCCEEECCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEE VADGALRGVIAINAARELKLARKWMNQGRAIDVAALADTAKALA EECCCEEEEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCC >Mature Secondary Structure PRTVVVIGGGQAAGWVVKTLRDEGFAGRIVMIADEAHLPYERPALSKAVLAGEADIATV CCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEE RVMQPDAFGALDVDAWQPERAASIDRARRVVRTASGREIEYDRLVIATGGTPRRLPDAIV EEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCHHHH GTAHLHYLRTLDEALALGEKLRASRRVLVIGGGWIGLEVAATARKLGVDALVVEGAPRLC HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEHHHHHHCCCEEEEECCCCHHH ARSVPGAVSDFLLDLHRANGVDVRLNASLASLDAHPDDARRVRATLAGGGVVDADFAVAG HHCCCCHHHHHHHHHHCCCCEEEEEECCEEECCCCCCHHHHEEEEECCCCEEECCHHHEE IGLALNTSLATEAGLHVDDGIVVDEYGATSDPAIFACGDVANHPNAWLKRRVRLESWANA ECEEEECCHHHHCCCEECCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCH QHQAIAAAKAVLGVRAPYAEIPWFWSDQYDVNLQILGDLPADARCIVRGELAAKRATLFF HHHHHHHHHHHHHCCCCHHHCCEEECCCEEEEEEEEECCCCCCEEEEECCCCCCEEEEEE VADGALRGVIAINAARELKLARKWMNQGRAIDVAALADTAKALA EECCCEEEEEEECCHHHHHHHHHHHHCCCEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Reduced Ferredoxin; NAD(+); 3-phenylpropionate; NADH; Proton; O2 [C]
Specific reaction: Reduced Ferredoxin + NAD(+) = Oxidized Ferredoxin + NADH. 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2180940; 2613690; 3003058; 12011076; 11524002 [H]