| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is yceI [H]
Identifier: 126445762
GI number: 126445762
Start: 930465
End: 931871
Strand: Direct
Name: yceI [H]
Synonym: BMA10247_A0983
Alternate gene names: 126445762
Gene position: 930465-931871 (Clockwise)
Preceding gene: 126446234
Following gene: 126447035
Centisome position: 39.55
GC content: 68.23
Gene sequence:
>1407_bases ATGAGCACACTGGAAACCGCGATCGCGGGCGCGCCCGCGGCCGACGCGGCGGCGGGCGCCGCGACACCCGGCGCGATCAT CGCGCGCATCGAGCGGCTGCCCGCGAACGCGATGCAGATCCGCGCGCGCGTGCTGATCGGCACCGCGACCTTCTTCGACG GCTTCGACGTGATCACGATCGCGGCGACGCTGCCGCTGCTGATCCACAAGTGGGGGCTGTCGCCGAATCAGATCGGAATG CTGATCGCGTCCGGCGCGATCGGCCAATTGCTCGGTGCGTTCCTGTTCCCGGCGCTCGCGCAAAAGCACGGCCGCGTGCG CGCGATCGCGTGGAGCTCGGCGGTGATCGGCGTGACGAGCATCGCATGCGGATTCGCTTCGACGTTCGAAACATTCGTGC TGCTGCGGATCGTGCAGGGGCTCGGTCTCGGCGGCGAGCTGCCGGTCGCCGCGACCTACATCAACGAAATCACGCGCGCG CACGGCCGCGGGCGCTTCGTGCTGCTGTACGAGATCGTGTTTCCGATCGGCCTGCTCGCGTCGATGGCGTTCGGCGCGTG GCTCGTGCCGCGCTTCGGCTGGGAGGTGATGTATTTCATCGGCGGCATGCCGCTGCTGCTCGCGCTCGTGCTCACGCGGC TCGTGCCGGAATCGCCGCGCTGGCTCGCGTCGCGCGGGCGGCTCGACGAAGCGGGGCGCGCGCTGCATGCGTTCGAGGCC TCGGTGAAAGAACCGCTGCCGCCCGTCGCGCACGCGGGCGAATTCGACACGCTCGTGCTCAGCCATCCGAAGCGCCGAAT GGTCGACCTGTTCGGGCCCGCGTATCTGAAGCGCACGCTTGCGGTGGCGACGCTATGGGCCACGTGCGGTTTCATCCAGT ACGGGCTGTCGACCTGGCTGCCGACGATCTACAAGAACTTCTATCACGCGCCGCTGCAGCTCGCGCTGAATCTCGCGGTG ATCGGCTCGGTGATGGGCGTGGCGGGCTCGCTCGTGTCGGCGCTCGCCGTCGACGTGGTCGGCCGCAAGCCGGTGATCGT GTGGTCGTTCGTGCTCTGTGCGCTGTCGCTCGTCTTCGCGGGCGTCTATCACGCATCGTCGGTGTATGTGGTCGCGGCGT TCTGCTCGCTCGCGCTCGGTTTGATGGCCTCGGGCTTCATCACCTCCTATGTGTACACGCCCGAGCAGTATCCGACGAGC ATCCGCGCGGCCGGCTGCGGGCTCGGCAGCGCGTGGCTGAAGATCGCCTCGTTCGTCGCGCCGATGGTGGTGCCGCGCGC GATCGTCGGCGGCGATCTGAGCCCGGCGTTCTATTTGCTCGCGGCGGTGCCGCTCATTGCCGCGCTGACCGTGCATTCCG TCGGCATCGAGACGAAAGGCCAGGTGCTCGAGAAACTCGAGGCGTAG
Upstream 100 bases:
>100_bases TGGATGAATCAGGGGCGCGCGATCGACGTCGCCGCGCTGGCGGACACGGCGAAGGCGCTTGCCTGAGCACGAGAACGACG ACATGGAGGAGAACCCACGC
Downstream 100 bases:
>100_bases TGCGGCGTTTTTGCAACGTTTCGGCGGTGCAGCAAAAGAGGCTCGGATTATTCCGGGCTTTTTTTGTGCGCGTTTTAAAG TAGTGGGGAATATGCATCGA
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MSTLETAIAGAPAADAAAGAATPGAIIARIERLPANAMQIRARVLIGTATFFDGFDVITIAATLPLLIHKWGLSPNQIGM LIASGAIGQLLGAFLFPALAQKHGRVRAIAWSSAVIGVTSIACGFASTFETFVLLRIVQGLGLGGELPVAATYINEITRA HGRGRFVLLYEIVFPIGLLASMAFGAWLVPRFGWEVMYFIGGMPLLLALVLTRLVPESPRWLASRGRLDEAGRALHAFEA SVKEPLPPVAHAGEFDTLVLSHPKRRMVDLFGPAYLKRTLAVATLWATCGFIQYGLSTWLPTIYKNFYHAPLQLALNLAV IGSVMGVAGSLVSALAVDVVGRKPVIVWSFVLCALSLVFAGVYHASSVYVVAAFCSLALGLMASGFITSYVYTPEQYPTS IRAAGCGLGSAWLKIASFVAPMVVPRAIVGGDLSPAFYLLAAVPLIAALTVHSVGIETKGQVLEKLEA
Sequences:
>Translated_468_residues MSTLETAIAGAPAADAAAGAATPGAIIARIERLPANAMQIRARVLIGTATFFDGFDVITIAATLPLLIHKWGLSPNQIGM LIASGAIGQLLGAFLFPALAQKHGRVRAIAWSSAVIGVTSIACGFASTFETFVLLRIVQGLGLGGELPVAATYINEITRA HGRGRFVLLYEIVFPIGLLASMAFGAWLVPRFGWEVMYFIGGMPLLLALVLTRLVPESPRWLASRGRLDEAGRALHAFEA SVKEPLPPVAHAGEFDTLVLSHPKRRMVDLFGPAYLKRTLAVATLWATCGFIQYGLSTWLPTIYKNFYHAPLQLALNLAV IGSVMGVAGSLVSALAVDVVGRKPVIVWSFVLCALSLVFAGVYHASSVYVVAAFCSLALGLMASGFITSYVYTPEQYPTS IRAAGCGLGSAWLKIASFVAPMVVPRAIVGGDLSPAFYLLAAVPLIAALTVHSVGIETKGQVLEKLEA >Mature_467_residues STLETAIAGAPAADAAAGAATPGAIIARIERLPANAMQIRARVLIGTATFFDGFDVITIAATLPLLIHKWGLSPNQIGML IASGAIGQLLGAFLFPALAQKHGRVRAIAWSSAVIGVTSIACGFASTFETFVLLRIVQGLGLGGELPVAATYINEITRAH GRGRFVLLYEIVFPIGLLASMAFGAWLVPRFGWEVMYFIGGMPLLLALVLTRLVPESPRWLASRGRLDEAGRALHAFEAS VKEPLPPVAHAGEFDTLVLSHPKRRMVDLFGPAYLKRTLAVATLWATCGFIQYGLSTWLPTIYKNFYHAPLQLALNLAVI GSVMGVAGSLVSALAVDVVGRKPVIVWSFVLCALSLVFAGVYHASSVYVVAAFCSLALGLMASGFITSYVYTPEQYPTSI RAAGCGLGSAWLKIASFVAPMVVPRAIVGGDLSPAFYLLAAVPLIAALTVHSVGIETKGQVLEKLEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=497, Percent_Identity=25.1509054325956, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI213021148, Length=464, Percent_Identity=21.7672413793103, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI24497476, Length=389, Percent_Identity=27.5064267352185, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI20070188, Length=389, Percent_Identity=27.5064267352185, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI7662270, Length=329, Percent_Identity=24.6200607902736, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI216548223, Length=304, Percent_Identity=25, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI166064021, Length=417, Percent_Identity=25.6594724220624, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI262399383, Length=287, Percent_Identity=24.0418118466899, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI166197673, Length=389, Percent_Identity=25.706940874036, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI33457322, Length=331, Percent_Identity=22.0543806646526, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI4506999, Length=345, Percent_Identity=25.2173913043478, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI24497478, Length=327, Percent_Identity=26.2996941896024, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI24497480, Length=327, Percent_Identity=26.2996941896024, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI4507005, Length=353, Percent_Identity=25.2124645892351, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI31542327, Length=378, Percent_Identity=28.042328042328, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI73695465, Length=269, Percent_Identity=23.0483271375465, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI11415038, Length=379, Percent_Identity=24.0105540897098, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI23510410, Length=257, Percent_Identity=26.8482490272374, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI296080721, Length=391, Percent_Identity=22.7621483375959, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI24497490, Length=349, Percent_Identity=24.3553008595989, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI296080719, Length=386, Percent_Identity=22.7979274611399, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI24497499, Length=386, Percent_Identity=22.7979274611399, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI296080734, Length=361, Percent_Identity=22.9916897506925, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI157426885, Length=400, Percent_Identity=24.25, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1786229, Length=419, Percent_Identity=27.2076372315036, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788068, Length=461, Percent_Identity=25.8134490238612, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI87082159, Length=400, Percent_Identity=27, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1788074, Length=397, Percent_Identity=27.7078085642317, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI87082231, Length=199, Percent_Identity=30.1507537688442, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1789207, Length=445, Percent_Identity=22.9213483146067, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790463, Length=435, Percent_Identity=24.367816091954, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87082404, Length=365, Percent_Identity=23.5616438356164, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081723, Length=385, Percent_Identity=25.1948051948052, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI32564663, Length=472, Percent_Identity=23.3050847457627, Blast_Score=121, Evalue=7e-28, Organism=Caenorhabditis elegans, GI193202825, Length=393, Percent_Identity=25.1908396946565, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI71986689, Length=393, Percent_Identity=25.1908396946565, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI25145172, Length=388, Percent_Identity=25.7731958762887, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71989531, Length=353, Percent_Identity=24.6458923512748, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71989525, Length=353, Percent_Identity=24.6458923512748, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71991859, Length=350, Percent_Identity=23.4285714285714, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71991854, Length=350, Percent_Identity=23.4285714285714, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17565978, Length=195, Percent_Identity=25.6410256410256, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6319718, Length=304, Percent_Identity=23.6842105263158, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6321100, Length=380, Percent_Identity=24.7368421052632, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6320063, Length=503, Percent_Identity=23.2604373757455, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922616, Length=392, Percent_Identity=25.2551020408163, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI19922874, Length=407, Percent_Identity=21.8673218673219, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24640198, Length=451, Percent_Identity=23.9467849223947, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24640196, Length=451, Percent_Identity=23.9467849223947, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24640200, Length=451, Percent_Identity=23.9467849223947, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24649622, Length=355, Percent_Identity=23.943661971831, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI24649616, Length=382, Percent_Identity=25.6544502617801, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI24649618, Length=346, Percent_Identity=23.9884393063584, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI221330907, Length=350, Percent_Identity=23.7142857142857, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24647365, Length=316, Percent_Identity=24.6835443037975, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49458; Mature: 49327
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLETAIAGAPAADAAAGAATPGAIIARIERLPANAMQIRARVLIGTATFFDGFDVITI CCCHHHHHCCCCCCHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHEEEHHHHCCCHHHHH AATLPLLIHKWGLSPNQIGMLIASGAIGQLLGAFLFPALAQKHGRVRAIAWSSAVIGVTS HHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH IACGFASTFETFVLLRIVQGLGLGGELPVAATYINEITRAHGRGRFVLLYEIVFPIGLLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH SMAFGAWLVPRFGWEVMYFIGGMPLLLALVLTRLVPESPRWLASRGRLDEAGRALHAFEA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHH SVKEPLPPVAHAGEFDTLVLSHPKRRMVDLFGPAYLKRTLAVATLWATCGFIQYGLSTWL HHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTIYKNFYHAPLQLALNLAVIGSVMGVAGSLVSALAVDVVGRKPVIVWSFVLCALSLVFA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GVYHASSVYVVAAFCSLALGLMASGFITSYVYTPEQYPTSIRAAGCGLGSAWLKIASFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCHHHHHHHHHHH PMVVPRAIVGGDLSPAFYLLAAVPLIAALTVHSVGIETKGQVLEKLEA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure STLETAIAGAPAADAAAGAATPGAIIARIERLPANAMQIRARVLIGTATFFDGFDVITI CCHHHHHCCCCCCHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHEEEHHHHCCCHHHHH AATLPLLIHKWGLSPNQIGMLIASGAIGQLLGAFLFPALAQKHGRVRAIAWSSAVIGVTS HHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH IACGFASTFETFVLLRIVQGLGLGGELPVAATYINEITRAHGRGRFVLLYEIVFPIGLLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH SMAFGAWLVPRFGWEVMYFIGGMPLLLALVLTRLVPESPRWLASRGRLDEAGRALHAFEA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHH SVKEPLPPVAHAGEFDTLVLSHPKRRMVDLFGPAYLKRTLAVATLWATCGFIQYGLSTWL HHHCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PTIYKNFYHAPLQLALNLAVIGSVMGVAGSLVSALAVDVVGRKPVIVWSFVLCALSLVFA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GVYHASSVYVVAAFCSLALGLMASGFITSYVYTPEQYPTSIRAAGCGLGSAWLKIASFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHCCCCCHHHHHHHHHHH PMVVPRAIVGGDLSPAFYLLAAVPLIAALTVHSVGIETKGQVLEKLEA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]