| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is mviN [H]
Identifier: 126209021
GI number: 126209021
Start: 1780426
End: 1781955
Strand: Reverse
Name: mviN [H]
Synonym: APL_1557
Alternate gene names: 126209021
Gene position: 1781955-1780426 (Counterclockwise)
Preceding gene: 126209023
Following gene: 126209020
Centisome position: 78.35
GC content: 45.36
Gene sequence:
>1530_bases ATGACCTTGATTTCTCGAGTTCTCGGACTCGTGCGTGATGTGGTGATCGCCGGCTTACTCGGTGCCGGCGCAATGTCGGA CGTCTTTCTGTTTGCCAACCGTATTCCGAATTTTCTACGCCGCCTCTTTGCGGAAGGCGCTTTTTCAAAGGCGTTCGTAC CGGTGCTTGCCGAATATAACGCCGACAACGATTTGGATAAAACCCGTGAGTTTGTCGCCAAAGTGTCGGGAACCTTAGGC GGTTTAGTCACGGTTGTCACTTTAGTGGCAATGATTGGTTCGCCGGTGGTTGCCGCTTTATTCGGTACCGGTTGGTTTAT GGATTGGGTAAACGACGGCCCTGACGCACAAAAATTCACTCAAGCCTCATTACTGCTGAAAATCACTTTTCCTTACTTGT GGTTTATTACTTTCGTTGCGTTGTCCGGAGCGGTTTTAAATACCATTGGTAAGTTTGGCGTGATGGCGTTTTCGCCGGTA TTGCTAAATATTGCGATGATCGGTATGGCGTTATTCGGTGCGGATTATTTTGAACAACCTGATGTCGCCTTAGCTTGGGG TATTTTCCTCGGCGGATTGTTGCAATTCTTATTCCAAATCCCGTTTATGAAAAAAGAAGGTTTACTGGTTAAACCGAAAT GGGCGTGGAAAGACGAAGGGGTGACTAAAGTCCGAAATTTAATGATTCCGGCATTATTCGGGGTTTCGGTAACCCAGCTT AATTTGTTAATTAACCAAGTGATTGCCAGCTTTTTAGTCACCGGTTCGATTACTTGGTTATATTATTCCGATCGCTTAAT CGAGTTTCCGCTCGGGTTATTCGGCATTGCCATTTCTACAGTGGTATTACCGAGTTTATCTCGTATTGCGAAAAAGAAAG AGATTGACGAAGTACAACGTGCGGTAGAGTTCCAAGGCACGATGGACTGGGGCGTAAGAATGGTGTTATTACTCGGTATT CCGGCAATGATTGGTATCGCGGTATTAGCCCAGCCGTTAATGATGACCATCTTTATGCGCGGCAAATTCGGTTTATCCGA TGTGATTGCTACTTCCCATGCCTTATGGATTATGTGCTTGGGATTAAACAGTTATATGCTTATCAATATTTTAGCAAACG GCTTCTATGCCCGCCAAAATACCAAAACACCGGTCAAGATCGGTATGATCGCTACCGTTTGTAATATCTGTTTCGGCGTA TTGGCAATCCCGTTCGGCTATTTGGGCTTGGCAATGGCATCGGCGCTTTCGGCGGCGGTTAATGCGTCGCTACTTTATCG CGGGCTTGCTCAATCCGGAGTGTATAAAGTAACGGCGAAAACGGGCATATTCGTCTTAAAAGTCGCGATTTCCGCTTGTT TAATGGGCGCATCGGTCGCTTATTTTTCGCCAAATATCGAAAGCTGGTATGCGATGAATATTTGGTTAAAAGTATATTGG TTAGGTTGGTTAATCGTACTGGCGGCGATCGTGTATTTTAGTTCGCTATTTGTATTGGGTATTCGTAAGAGAGATTTTCG ATCTGCATAA
Upstream 100 bases:
>100_bases TTCAAAGCCCTTTTGTTAAACTGCTATCCTTTAATTTTGATATGAATTTATAACGCTTATGAGCAAAAAACTTTTAAAGT CGGGCATGATTGTCAGTTCA
Downstream 100 bases:
>100_bases AAGAAAAAGGATATAACGTATGAACGTGCAGAATATTATTTTATGGAGACGCTTTTTTTCCGGACTCGCTTATACGGCGA TGCAAAGTGTGTTTTTTATT
Product: virulence factor-like MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MTLISRVLGLVRDVVIAGLLGAGAMSDVFLFANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDLDKTREFVAKVSGTLG GLVTVVTLVAMIGSPVVAALFGTGWFMDWVNDGPDAQKFTQASLLLKITFPYLWFITFVALSGAVLNTIGKFGVMAFSPV LLNIAMIGMALFGADYFEQPDVALAWGIFLGGLLQFLFQIPFMKKEGLLVKPKWAWKDEGVTKVRNLMIPALFGVSVTQL NLLINQVIASFLVTGSITWLYYSDRLIEFPLGLFGIAISTVVLPSLSRIAKKKEIDEVQRAVEFQGTMDWGVRMVLLLGI PAMIGIAVLAQPLMMTIFMRGKFGLSDVIATSHALWIMCLGLNSYMLINILANGFYARQNTKTPVKIGMIATVCNICFGV LAIPFGYLGLAMASALSAAVNASLLYRGLAQSGVYKVTAKTGIFVLKVAISACLMGASVAYFSPNIESWYAMNIWLKVYW LGWLIVLAAIVYFSSLFVLGIRKRDFRSA
Sequences:
>Translated_509_residues MTLISRVLGLVRDVVIAGLLGAGAMSDVFLFANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDLDKTREFVAKVSGTLG GLVTVVTLVAMIGSPVVAALFGTGWFMDWVNDGPDAQKFTQASLLLKITFPYLWFITFVALSGAVLNTIGKFGVMAFSPV LLNIAMIGMALFGADYFEQPDVALAWGIFLGGLLQFLFQIPFMKKEGLLVKPKWAWKDEGVTKVRNLMIPALFGVSVTQL NLLINQVIASFLVTGSITWLYYSDRLIEFPLGLFGIAISTVVLPSLSRIAKKKEIDEVQRAVEFQGTMDWGVRMVLLLGI PAMIGIAVLAQPLMMTIFMRGKFGLSDVIATSHALWIMCLGLNSYMLINILANGFYARQNTKTPVKIGMIATVCNICFGV LAIPFGYLGLAMASALSAAVNASLLYRGLAQSGVYKVTAKTGIFVLKVAISACLMGASVAYFSPNIESWYAMNIWLKVYW LGWLIVLAAIVYFSSLFVLGIRKRDFRSA >Mature_508_residues TLISRVLGLVRDVVIAGLLGAGAMSDVFLFANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDLDKTREFVAKVSGTLGG LVTVVTLVAMIGSPVVAALFGTGWFMDWVNDGPDAQKFTQASLLLKITFPYLWFITFVALSGAVLNTIGKFGVMAFSPVL LNIAMIGMALFGADYFEQPDVALAWGIFLGGLLQFLFQIPFMKKEGLLVKPKWAWKDEGVTKVRNLMIPALFGVSVTQLN LLINQVIASFLVTGSITWLYYSDRLIEFPLGLFGIAISTVVLPSLSRIAKKKEIDEVQRAVEFQGTMDWGVRMVLLLGIP AMIGIAVLAQPLMMTIFMRGKFGLSDVIATSHALWIMCLGLNSYMLINILANGFYARQNTKTPVKIGMIATVCNICFGVL AIPFGYLGLAMASALSAAVNASLLYRGLAQSGVYKVTAKTGIFVLKVAISACLMGASVAYFSPNIESWYAMNIWLKVYWL GWLIVLAAIVYFSSLFVLGIRKRDFRSA
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=507, Percent_Identity=40.8284023668639, Blast_Score=374, Evalue=1e-104,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 55599; Mature: 55468
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLISRVLGLVRDVVIAGLLGAGAMSDVFLFANRIPNFLRRLFAEGAFSKAFVPVLAEYN CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC ADNDLDKTREFVAKVSGTLGGLVTVVTLVAMIGSPVVAALFGTGWFMDWVNDGPDAQKFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH QASLLLKITFPYLWFITFVALSGAVLNTIGKFGVMAFSPVLLNIAMIGMALFGADYFEQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC DVALAWGIFLGGLLQFLFQIPFMKKEGLLVKPKWAWKDEGVTKVRNLMIPALFGVSVTQL CHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHH NLLINQVIASFLVTGSITWLYYSDRLIEFPLGLFGIAISTVVLPSLSRIAKKKEIDEVQR HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVEFQGTMDWGVRMVLLLGIPAMIGIAVLAQPLMMTIFMRGKFGLSDVIATSHALWIMCL HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GLNSYMLINILANGFYARQNTKTPVKIGMIATVCNICFGVLAIPFGYLGLAMASALSAAV CCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NASLLYRGLAQSGVYKVTAKTGIFVLKVAISACLMGASVAYFSPNIESWYAMNIWLKVYW HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHHHHHH LGWLIVLAAIVYFSSLFVLGIRKRDFRSA HHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TLISRVLGLVRDVVIAGLLGAGAMSDVFLFANRIPNFLRRLFAEGAFSKAFVPVLAEYN CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC ADNDLDKTREFVAKVSGTLGGLVTVVTLVAMIGSPVVAALFGTGWFMDWVNDGPDAQKFT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH QASLLLKITFPYLWFITFVALSGAVLNTIGKFGVMAFSPVLLNIAMIGMALFGADYFEQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC DVALAWGIFLGGLLQFLFQIPFMKKEGLLVKPKWAWKDEGVTKVRNLMIPALFGVSVTQL CHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHH NLLINQVIASFLVTGSITWLYYSDRLIEFPLGLFGIAISTVVLPSLSRIAKKKEIDEVQR HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVEFQGTMDWGVRMVLLLGIPAMIGIAVLAQPLMMTIFMRGKFGLSDVIATSHALWIMCL HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH GLNSYMLINILANGFYARQNTKTPVKIGMIATVCNICFGVLAIPFGYLGLAMASALSAAV CCCHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NASLLYRGLAQSGVYKVTAKTGIFVLKVAISACLMGASVAYFSPNIESWYAMNIWLKVYW HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCHHHEECCCCCCHHHHHHHHHHHH LGWLIVLAAIVYFSSLFVLGIRKRDFRSA HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]